RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 PRAC2D3DTV9 90 aa10.07□□□□□ -0.8
USP49-203ENST00000394253 HILS1P60008 231 aa10.07□□□□□ -0.8
USP49-203ENST00000394253 U3KQK5 164 aa10.07□□□□□ -0.8
USP49-203ENST00000394253 FASNP49327 2511 aaKnown RBP10.07□□□□□ -0.8
USP49-203ENST00000394253 BEAN1Q3B7T3 259 aa10.07□□□□□ -0.8
USP49-203ENST00000394253 TMEM105Q8N8V8 129 aa10.07□□□□□ -0.8
USP49-203ENST00000394253 DEFB4AO15263 64 aa10.07□□□□□ -0.8
USP49-203ENST00000394253 MYCNOSP40205 109 aa10.06□□□□□ -0.8
USP49-203ENST00000394253 PRSS33Q8NF86 280 aa10.06□□□□□ -0.8
USP49-203ENST00000394253 Q8N3U1 123 aa10.06□□□□□ -0.8
USP49-203ENST00000394253 PATE2Q6UY27 113 aa10.06□□□□□ -0.8
USP49-203ENST00000394253 PLA2G1BP04054 148 aaKnown RBP10.05□□□□□ -0.8
USP49-203ENST00000394253 A0A1B0GU69 56 aa10.05□□□□□ -0.8
USP49-203ENST00000394253 LOC100131303A0A0U1RQF7 123 aa10.05□□□□□ -0.8
USP49-203ENST00000394253 Q8N6K4 173 aa10.04□□□□□ -0.8
USP49-203ENST00000394253 MAP6D1Q9H9H5 199 aa10.04□□□□□ -0.8
USP49-203ENST00000394253 EIF4EBP1Q13541 118 aaPredicted RBP10.04□□□□□ -0.8
USP49-203ENST00000394253 DNAJC9-AS1A6NH13 148 aa10.04□□□□□ -0.8
USP49-203ENST00000394253 IGLV4-69A0A075B6H9 119 aa10.03□□□□□ -0.8
USP49-203ENST00000394253 BPTFQ12830 3046 aa10.03□□□□□ -0.8
USP49-203ENST00000394253 C2orf91Q6ZV80 131 aa10.03□□□□□ -0.8
USP49-203ENST00000394253 C1orf137Q5JT78 98 aa10.03□□□□□ -0.8
USP49-203ENST00000394253 Q8N814 137 aa10.03□□□□□ -0.8
USP49-203ENST00000394253 M0QY20 66 aa10.03□□□□□ -0.8
USP49-203ENST00000394253 OXLD1Q5BKU9 147 aa10.02□□□□□ -0.8
USP49-203ENST00000394253 COL27A1Q8IZC6 1860 aaPredicted RBP10.02□□□□□ -0.8
USP49-203ENST00000394253 RITA1Q96K30 269 aa10.01□□□□□ -0.81
USP49-203ENST00000394253 PROK2Q9HC23 129 aa10.01□□□□□ -0.81
USP49-203ENST00000394253 CHD8Q9HCK8 2581 aa10.01□□□□□ -0.81
USP49-203ENST00000394253 VWCEQ96DN2 955 aa10.01□□□□□ -0.81
USP49-203ENST00000394253 PRRC2CQ9Y520 2896 aaKnown RBP10.01□□□□□ -0.81
USP49-203ENST00000394253 DEFB131BA0A096LNP1 70 aa10.01□□□□□ -0.81
USP49-203ENST00000394253 TRBV6-4A0A1B0GX49 114 aa10.01□□□□□ -0.81
USP49-203ENST00000394253 PPDPFQ9H3Y8 114 aa10.01□□□□□ -0.81
USP49-203ENST00000394253 DEFB113Q30KQ7 82 aa10□□□□□ -0.81
USP49-203ENST00000394253 MAPKAPK5-AS1Q8N8E1 139 aa10□□□□□ -0.81
USP49-203ENST00000394253 IGHV6-1A0A0B4J1U7 121 aa10□□□□□ -0.81
USP49-203ENST00000394253 HCG22E2RYF7 251 aa10□□□□□ -0.81
USP49-203ENST00000394253 Q6ZTI0 123 aa10□□□□□ -0.81
USP49-203ENST00000394253 PLAC8L1A1L4L8 177 aa9.99□□□□□ -0.81
USP49-203ENST00000394253 SPINK1P00995 79 aa9.99□□□□□ -0.81
USP49-203ENST00000394253 RPS28P62857 69 aaKnown RBP9.99□□□□□ -0.81
USP49-203ENST00000394253 Q8IZM0 81 aa9.98□□□□□ -0.81
USP49-203ENST00000394253 ACYP2P14621 99 aa9.98□□□□□ -0.81
USP49-203ENST00000394253 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.97□□□□□ -0.81
USP49-203ENST00000394253 RNASE3P12724 160 aaKnown RBP9.97□□□□□ -0.81
USP49-203ENST00000394253 CIRBP-AS1Q8TBR5 109 aa9.97□□□□□ -0.81
USP49-203ENST00000394253 C11orf53Q8IXP5 236 aa9.97□□□□□ -0.81
USP49-203ENST00000394253 TP53AIP1Q9HCN2 124 aa9.97□□□□□ -0.81
USP49-203ENST00000394253 ZNF503-AS2A6NEH8 195 aa9.97□□□□□ -0.81
USP49-203ENST00000394253 RSPO1Q2MKA7 263 aaPredicted RBP9.97□□□□□ -0.81
USP49-203ENST00000394253 REG3GQ6UW15 175 aa9.96□□□□□ -0.81
USP49-203ENST00000394253 LY6G6EA0A0G2JKS1 128 aa9.96□□□□□ -0.81
USP49-203ENST00000394253 USP9YO00507 2555 aaPredicted RBP9.96□□□□□ -0.81
USP49-203ENST00000394253 RPL37AP8A6NKH3 93 aa9.96□□□□□ -0.82
USP49-203ENST00000394253 UNQ9165/PRO28630Q6UXU0 137 aa9.96□□□□□ -0.82
USP49-203ENST00000394253 C7orf65Q6ZTY9 151 aa9.95□□□□□ -0.82
USP49-203ENST00000394253 GDF5OSQ5U4N7 250 aa9.95□□□□□ -0.82
USP49-203ENST00000394253 J3QKU1 62 aa9.95□□□□□ -0.82
USP49-203ENST00000394253 PRM2P04554 102 aa9.95□□□□□ -0.82
USP49-203ENST00000394253 ZNF843Q8N446 348 aa9.95□□□□□ -0.82
USP49-203ENST00000394253 RETNLBQ9BQ08 111 aa9.95□□□□□ -0.82
USP49-203ENST00000394253 ANKRD11Q6UB99 2663 aaPredicted RBP9.94□□□□□ -0.82
USP49-203ENST00000394253 PRLHP81277 87 aa9.94□□□□□ -0.82
USP49-203ENST00000394253 LINC00575Q6W349 94 aa9.94□□□□□ -0.82
USP49-203ENST00000394253 PCOTHQ58A44 107 aa9.94□□□□□ -0.82
USP49-203ENST00000394253 TP53TG3Q9ULZ0 132 aa9.94□□□□□ -0.82
USP49-203ENST00000394253 FRMD6-AS1P0C7T7 363 aa9.93□□□□□ -0.82
USP49-203ENST00000394253 ATP11AUNQ6ZP68 121 aa9.93□□□□□ -0.82
USP49-203ENST00000394253 C1orf64Q8NEQ6 169 aa9.93□□□□□ -0.82
USP49-203ENST00000394253 ZNF80P51504 273 aaPredicted RBP9.92□□□□□ -0.82
USP49-203ENST00000394253 LELP1Q5T871 98 aa9.92□□□□□ -0.82
USP49-203ENST00000394253 FAM215AQ9Y5M1 114 aa9.91□□□□□ -0.82
USP49-203ENST00000394253 Q6ZSR3 168 aa9.91□□□□□ -0.82
USP49-203ENST00000394253 KRTAP27-1Q3LI81 207 aa9.91□□□□□ -0.82
USP49-203ENST00000394253 PLA2G2EQ9NZK7 142 aa9.9□□□□□ -0.82
USP49-203ENST00000394253 TSHBP01222 138 aa9.9□□□□□ -0.82
USP49-203ENST00000394253 IGLV2-14P01704 120 aa9.9□□□□□ -0.82
USP49-203ENST00000394253 Q6ZTC4 211 aa9.9□□□□□ -0.82
USP49-203ENST00000394253 ZNF702PQ9H963 129 aa9.9□□□□□ -0.82
USP49-203ENST00000394253 SBSPONQ8IVN8 264 aa9.9□□□□□ -0.83
USP49-203ENST00000394253 TRAV10A0A0B4J240 114 aa9.89□□□□□ -0.83
USP49-203ENST00000394253 IGLV2-8P01709 118 aa9.89□□□□□ -0.83
USP49-203ENST00000394253 DEFB1P60022 68 aa9.89□□□□□ -0.83
USP49-203ENST00000394253 IGF2RP11717 2491 aa9.89□□□□□ -0.83
USP49-203ENST00000394253 A0A087WVE0 104 aa9.88□□□□□ -0.83
USP49-203ENST00000394253 DAZAP2Q15038 168 aaPredicted RBP9.88□□□□□ -0.83
USP49-203ENST00000394253 EPG5Q9HCE0 2579 aa9.88□□□□□ -0.83
USP49-203ENST00000394253 MRGPRG-AS1Q2M3A8 158 aa9.88□□□□□ -0.83
USP49-203ENST00000394253 P0C879 139 aa9.88□□□□□ -0.83
USP49-203ENST00000394253 E7EUB6 86 aa9.87□□□□□ -0.83
USP49-203ENST00000394253 IGLV1-47P01700 117 aa9.87□□□□□ -0.83
USP49-203ENST00000394253 F8WDY8 70 aa9.87□□□□□ -0.83
USP49-203ENST00000394253 K7EQG2 157 aa9.87□□□□□ -0.83
USP49-203ENST00000394253 C6orf48Q9UBA6 75 aa9.86□□□□□ -0.83
USP49-203ENST00000394253 LINC00959A0A1B0GUT2 108 aa9.86□□□□□ -0.83
USP49-203ENST00000394253 KPRPQ5T749 579 aaPredicted RBP9.86□□□□□ -0.83
USP49-203ENST00000394253 Q6ZS46 218 aa9.85□□□□□ -0.83
USP49-203ENST00000394253 MBD6Q96DN6 1003 aa9.85□□□□□ -0.83
USP49-203ENST00000394253 THSD7BQ9C0I4 1608 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms