RNA–Protein interactions for RNA: ENST00000393240.7

SYT1-202, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-202ENST00000393240 A0A0J9YWU9 116 aa6.72□□□□□ -1.33
SYT1-202ENST00000393240 LGALS3P17931 250 aaKnown RBP6.72□□□□□ -1.33
SYT1-202ENST00000393240 IGLV4-60A0A075B6I1 120 aa6.71□□□□□ -1.33
SYT1-202ENST00000393240 PRB2P02812 416 aaPredicted RBP6.71□□□□□ -1.33
SYT1-202ENST00000393240 TSPEAR-AS2P59090 65 aa6.71□□□□□ -1.33
SYT1-202ENST00000393240 COX6A2Q02221 97 aa6.71□□□□□ -1.33
SYT1-202ENST00000393240 DEFB121Q5J5C9 76 aa6.71□□□□□ -1.33
SYT1-202ENST00000393240 CDKN2A-AS1Q9UH64 79 aa6.71□□□□□ -1.33
SYT1-202ENST00000393240 TRAV13-1A0A0B4J241 112 aa6.71□□□□□ -1.34
SYT1-202ENST00000393240 IGHV3-30-3P0DP02 117 aa6.71□□□□□ -1.34
SYT1-202ENST00000393240 TMEM262E9PQX1 116 aa6.7□□□□□ -1.34
SYT1-202ENST00000393240 SCGB1D4Q6XE38 83 aa6.7□□□□□ -1.34
SYT1-202ENST00000393240 Q6ZTC4 211 aa6.7□□□□□ -1.34
SYT1-202ENST00000393240 C11orf45Q8TAV5 145 aa6.7□□□□□ -1.34
SYT1-202ENST00000393240 TM2D2Q9BX73 214 aa6.7□□□□□ -1.34
SYT1-202ENST00000393240 LELP1Q5T871 98 aa6.7□□□□□ -1.34
SYT1-202ENST00000393240 SIGMAR1Q99720 223 aa6.69□□□□□ -1.34
SYT1-202ENST00000393240 IGHV3-64A0A075B6Q5 118 aa6.69□□□□□ -1.34
SYT1-202ENST00000393240 TRAV8-3A0A0A6YYJ7 113 aa6.69□□□□□ -1.34
SYT1-202ENST00000393240 H3BUT2 72 aa6.69□□□□□ -1.34
SYT1-202ENST00000393240 SPINK8P0C7L1 97 aa6.69□□□□□ -1.34
SYT1-202ENST00000393240 CEND1Q8N111 149 aa6.69□□□□□ -1.34
SYT1-202ENST00000393240 IGLV5-39A0A0G2JS06 123 aa6.68□□□□□ -1.34
SYT1-202ENST00000393240 HIST1H4GQ99525 98 aa6.68□□□□□ -1.34
SYT1-202ENST00000393240 SPANXB1Q9NS25 103 aaPredicted RBP6.68□□□□□ -1.34
SYT1-202ENST00000393240 A0A1W2PPM0 123 aa6.68□□□□□ -1.34
SYT1-202ENST00000393240 NANOS2P60321 138 aaKnown RBP6.68□□□□□ -1.34
SYT1-202ENST00000393240 LYPD5Q6UWN5 251 aa6.68□□□□□ -1.34
SYT1-202ENST00000393240 SPCS1Q9Y6A9 102 aa6.68□□□□□ -1.34
SYT1-202ENST00000393240 GCSHP23434 173 aa6.67□□□□□ -1.34
SYT1-202ENST00000393240 ZFAND6Q6FIF0 208 aa6.67□□□□□ -1.34
SYT1-202ENST00000393240 MRAPQ8TCY5 172 aa6.67□□□□□ -1.34
SYT1-202ENST00000393240 DEFB131BA0A096LNP1 70 aa6.67□□□□□ -1.34
SYT1-202ENST00000393240 LINC00959A0A1B0GUT2 108 aa6.67□□□□□ -1.34
SYT1-202ENST00000393240 SMIM1B2RUZ4 78 aa6.67□□□□□ -1.34
SYT1-202ENST00000393240 FABP2P12104 132 aa6.67□□□□□ -1.34
SYT1-202ENST00000393240 NDUFA12Q9UI09 145 aa6.66□□□□□ -1.34
SYT1-202ENST00000393240 IGHV3OR16-9A0A0B4J2B5 98 aa6.66□□□□□ -1.34
SYT1-202ENST00000393240 J3QR89 54 aa6.66□□□□□ -1.34
SYT1-202ENST00000393240 FXYD2P54710 66 aa6.66□□□□□ -1.34
SYT1-202ENST00000393240 SS18Q15532 418 aa6.66□□□□□ -1.34
SYT1-202ENST00000393240 C10orf126Q8N4M7 172 aa6.66□□□□□ -1.34
SYT1-202ENST00000393240 NBEAL1Q6ZS30 2694 aa6.66□□□□□ -1.34
SYT1-202ENST00000393240 NOTCH1P46531 2555 aa6.66□□□□□ -1.34
SYT1-202ENST00000393240 SRSF9Q13242 221 aaKnown RBP eCLIP6.65□□□□□ -1.34
SYT1-202ENST00000393240 A0A0J9YXY3 114 aa6.65□□□□□ -1.34
SYT1-202ENST00000393240 IGKV3OR2-268A0A0C4DH90 116 aa6.65□□□□□ -1.35
SYT1-202ENST00000393240 RPL24P83731 157 aaKnown RBP6.65□□□□□ -1.35
SYT1-202ENST00000393240 A0A087WZ39 114 aa6.64□□□□□ -1.35
SYT1-202ENST00000393240 TRAV10A0A0B4J240 114 aa6.64□□□□□ -1.35
SYT1-202ENST00000393240 NDUFA1O15239 70 aa6.64□□□□□ -1.35
SYT1-202ENST00000393240 GAGE12HA6NDE8 117 aa6.64□□□□□ -1.35
SYT1-202ENST00000393240 SMIM13P0DJ93 91 aa6.64□□□□□ -1.35
SYT1-202ENST00000393240 LINC01561Q8N1V8 128 aa6.64□□□□□ -1.35
SYT1-202ENST00000393240 LINC00269Q8N2A0 174 aa6.64□□□□□ -1.35
SYT1-202ENST00000393240 IGHV3-30P01768 117 aa6.63□□□□□ -1.35
SYT1-202ENST00000393240 ANGP03950 147 aaKnown RBP6.63□□□□□ -1.35
SYT1-202ENST00000393240 IGHV3-30-5P0DP03 117 aa6.63□□□□□ -1.35
SYT1-202ENST00000393240 MGAM2Q2M2H8 2515 aa6.63□□□□□ -1.35
SYT1-202ENST00000393240 TIMM17BO60830 172 aa6.63□□□□□ -1.35
SYT1-202ENST00000393240 CKS1BP61024 79 aa6.63□□□□□ -1.35
SYT1-202ENST00000393240 REG3AQ06141 175 aa6.63□□□□□ -1.35
SYT1-202ENST00000393240 MTURNQ8N3F0 131 aa6.63□□□□□ -1.35
SYT1-202ENST00000393240 A6NJY4 79 aa6.63□□□□□ -1.35
SYT1-202ENST00000393240 RAB37Q96AX2 223 aa6.63□□□□□ -1.35
SYT1-202ENST00000393240 NAA38Q9BRA0 125 aaKnown RBP6.63□□□□□ -1.35
SYT1-202ENST00000393240 A0A1B0GWB2 263 aa6.62□□□□□ -1.35
SYT1-202ENST00000393240 LITAFQ99732 161 aa6.62□□□□□ -1.35
SYT1-202ENST00000393240 B9D2Q9BPU9 175 aa6.62□□□□□ -1.35
SYT1-202ENST00000393240 HERV-K104P63124 156 aa6.62□□□□□ -1.35
SYT1-202ENST00000393240 C15orf53Q8NAA6 179 aa6.62□□□□□ -1.35
SYT1-202ENST00000393240 PRR34Q9NV39 138 aa6.62□□□□□ -1.35
SYT1-202ENST00000393240 ESRGQ1W209 222 aa6.61□□□□□ -1.35
SYT1-202ENST00000393240 CD164L2Q6UWJ8 174 aa6.61□□□□□ -1.35
SYT1-202ENST00000393240 Q8N3U1 123 aa6.61□□□□□ -1.35
SYT1-202ENST00000393240 ZNF625Q96I27 306 aaPredicted RBP6.61□□□□□ -1.35
SYT1-202ENST00000393240 SPANXDQ9BXN6 97 aa6.61□□□□□ -1.35
SYT1-202ENST00000393240 NHP2Q9NX24 153 aaKnown RBP6.61□□□□□ -1.35
SYT1-202ENST00000393240 SPANXCQ9NY87 97 aa6.61□□□□□ -1.35
SYT1-202ENST00000393240 TENM3Q9P273 2699 aa6.61□□□□□ -1.35
SYT1-202ENST00000393240 F8W1H4 67 aa6.61□□□□□ -1.35
SYT1-202ENST00000393240 XCL1P47992 114 aa6.61□□□□□ -1.35
SYT1-202ENST00000393240 COX7B2Q8TF08 81 aa6.61□□□□□ -1.35
SYT1-202ENST00000393240 Q9H8V8 135 aa6.61□□□□□ -1.35
SYT1-202ENST00000393240 CIRBPQ14011 172 aaKnown RBP6.61□□□□□ -1.35
SYT1-202ENST00000393240 CLPSL2Q6UWE3 100 aa6.61□□□□□ -1.35
SYT1-202ENST00000393240 C5orf38Q86SI9 138 aa6.61□□□□□ -1.35
SYT1-202ENST00000393240 HUWE1Q7Z6Z7 4374 aaKnown RBP6.6□□□□□ -1.35
SYT1-202ENST00000393240 SFTA2Q6UW10 78 aa6.6□□□□□ -1.35
SYT1-202ENST00000393240 CHCHD10Q8WYQ3 142 aaPredicted RBP6.6□□□□□ -1.35
SYT1-202ENST00000393240 MIAQ16674 131 aa6.59□□□□□ -1.35
SYT1-202ENST00000393240 ADAMTSL4-AS1Q5T5F5 129 aa6.59□□□□□ -1.35
SYT1-202ENST00000393240 MUSTN1Q8IVN3 82 aa6.59□□□□□ -1.35
SYT1-202ENST00000393240 KLK12Q9UKR0 248 aa6.59□□□□□ -1.35
SYT1-202ENST00000393240 TRAV8-4A0A0B4J246 113 aa6.58□□□□□ -1.36
SYT1-202ENST00000393240 IFITM1P13164 125 aa6.58□□□□□ -1.36
SYT1-202ENST00000393240 ENHOQ6UWT2 76 aa6.58□□□□□ -1.36
SYT1-202ENST00000393240 WFDC10BQ8IUB3 73 aa6.58□□□□□ -1.36
SYT1-202ENST00000393240 K7ERJ3 54 aa6.58□□□□□ -1.36
SYT1-202ENST00000393240 COX7A2LO14548 114 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms