RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 TRACP01848 142 aa10.83□□□□□ -0.68
SHTN1-204ENST00000392903 PROK1P58294 105 aa10.83□□□□□ -0.68
SHTN1-204ENST00000392903 BEAN1Q3B7T3 259 aa10.83□□□□□ -0.68
SHTN1-204ENST00000392903 COX7CP15954 63 aa10.82□□□□□ -0.68
SHTN1-204ENST00000392903 NOTCH2Q04721 2471 aa10.82□□□□□ -0.68
SHTN1-204ENST00000392903 CHCHD7Q9BUK0 85 aa10.82□□□□□ -0.68
SHTN1-204ENST00000392903 IGLV5-45A0A087WSX0 123 aa10.81□□□□□ -0.68
SHTN1-204ENST00000392903 NACAE9PAV3 2078 aa10.81□□□□□ -0.68
SHTN1-204ENST00000392903 J3KT08 172 aa10.8□□□□□ -0.68
SHTN1-204ENST00000392903 TMEM86BQ8N661 226 aa10.8□□□□□ -0.68
SHTN1-204ENST00000392903 HECTD1Q9ULT8 2610 aa10.8□□□□□ -0.68
SHTN1-204ENST00000392903 FAM222AQ5U5X8 452 aa10.8□□□□□ -0.68
SHTN1-204ENST00000392903 CDKN2A-AS1Q9UH64 79 aa10.8□□□□□ -0.68
SHTN1-204ENST00000392903 C22orf24Q9Y442 160 aa10.8□□□□□ -0.68
SHTN1-204ENST00000392903 GCN1Q92616 2671 aaKnown RBP10.8□□□□□ -0.68
SHTN1-204ENST00000392903 LOC107984640A0A0U1RRK4 108 aa10.79□□□□□ -0.68
SHTN1-204ENST00000392903 BAALC-AS2P0C853 105 aa10.79□□□□□ -0.68
SHTN1-204ENST00000392903 CRYGAP11844 174 aa10.79□□□□□ -0.68
SHTN1-204ENST00000392903 TIRAPP58753 221 aa10.79□□□□□ -0.68
SHTN1-204ENST00000392903 HIST1H4AP62805 103 aaKnown RBP10.79□□□□□ -0.68
SHTN1-204ENST00000392903 COPS9Q8WXC6 57 aa10.79□□□□□ -0.68
SHTN1-204ENST00000392903 C2orf48Q96LS8 159 aa10.79□□□□□ -0.68
SHTN1-204ENST00000392903 Q9UF83 564 aa10.79□□□□□ -0.68
SHTN1-204ENST00000392903 KMT2BQ9UMN6 2715 aaPredicted RBP10.78□□□□□ -0.68
SHTN1-204ENST00000392903 INAFM2P0DMQ5 153 aa10.78□□□□□ -0.68
SHTN1-204ENST00000392903 CCL24O00175 119 aa10.78□□□□□ -0.68
SHTN1-204ENST00000392903 C5orf47Q569G3 176 aa10.78□□□□□ -0.68
SHTN1-204ENST00000392903 XCL2Q9UBD3 114 aa10.78□□□□□ -0.68
SHTN1-204ENST00000392903 IGLV5-39A0A0G2JS06 123 aa10.77□□□□□ -0.68
SHTN1-204ENST00000392903 KRTAP1-1Q07627 177 aa10.77□□□□□ -0.68
SHTN1-204ENST00000392903 KLK5Q9Y337 293 aaPredicted RBP10.77□□□□□ -0.68
SHTN1-204ENST00000392903 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.77□□□□□ -0.69
SHTN1-204ENST00000392903 IGHV3OR16-12A0A075B7B8 117 aa10.77□□□□□ -0.69
SHTN1-204ENST00000392903 IGKV2-29A2NJV5 120 aaPredicted RBP10.77□□□□□ -0.69
SHTN1-204ENST00000392903 RPS28P62857 69 aaKnown RBP10.77□□□□□ -0.69
SHTN1-204ENST00000392903 LINC00467Q9BRT7 94 aa10.77□□□□□ -0.69
SHTN1-204ENST00000392903 A8MTW9 85 aa10.76□□□□□ -0.69
SHTN1-204ENST00000392903 ATOX1O00244 68 aa10.76□□□□□ -0.69
SHTN1-204ENST00000392903 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.76□□□□□ -0.69
SHTN1-204ENST00000392903 Q9H8V8 135 aa10.76□□□□□ -0.69
SHTN1-204ENST00000392903 PLA2G2AP14555 144 aa10.76□□□□□ -0.69
SHTN1-204ENST00000392903 ODF3L2Q3SX64 289 aa10.76□□□□□ -0.69
SHTN1-204ENST00000392903 GAGE2AQ6NT46 116 aa10.76□□□□□ -0.69
SHTN1-204ENST00000392903 SOSTDC1Q6X4U4 206 aa10.76□□□□□ -0.69
SHTN1-204ENST00000392903 Q6ZSN1 163 aa10.76□□□□□ -0.69
SHTN1-204ENST00000392903 FAM19A5Q7Z5A7 132 aaPredicted RBP10.75□□□□□ -0.69
SHTN1-204ENST00000392903 LINC01006Q8NI28 216 aa10.75□□□□□ -0.69
SHTN1-204ENST00000392903 C2CD3Q4AC94 2353 aa10.74□□□□□ -0.69
SHTN1-204ENST00000392903 J3QKU1 62 aa10.74□□□□□ -0.69
SHTN1-204ENST00000392903 FAM218AQ96MZ4 157 aa10.74□□□□□ -0.69
SHTN1-204ENST00000392903 HIVEP2P31629 2446 aa10.74□□□□□ -0.69
SHTN1-204ENST00000392903 SMIM9A6NGZ8 99 aa10.74□□□□□ -0.69
SHTN1-204ENST00000392903 ZNF415Q09FC8 603 aa10.74□□□□□ -0.69
SHTN1-204ENST00000392903 PIK3CD-AS1Q5SR53 167 aa10.73□□□□□ -0.69
SHTN1-204ENST00000392903 STHQ8IWL8 128 aa10.73□□□□□ -0.69
SHTN1-204ENST00000392903 INSP01308 110 aa10.73□□□□□ -0.69
SHTN1-204ENST00000392903 COX6A2Q02221 97 aa10.73□□□□□ -0.69
SHTN1-204ENST00000392903 C11orf72Q8NBR9 251 aa10.73□□□□□ -0.69
SHTN1-204ENST00000392903 SMR3AQ99954 134 aa10.72□□□□□ -0.69
SHTN1-204ENST00000392903 ZNF625Q96I27 306 aaPredicted RBP10.72□□□□□ -0.69
SHTN1-204ENST00000392903 A0A0U1RRA0 63 aa10.71□□□□□ -0.69
SHTN1-204ENST00000392903 MALP21145 153 aa10.71□□□□□ -0.69
SHTN1-204ENST00000392903 FN1P02751 2386 aaKnown RBP10.71□□□□□ -0.7
SHTN1-204ENST00000392903 IGHV3-38A0A0C4DH36 116 aa10.7□□□□□ -0.7
SHTN1-204ENST00000392903 RPL18AQ02543 176 aaKnown RBP10.7□□□□□ -0.7
SHTN1-204ENST00000392903 LINC00242Q5T6M2 205 aa10.7□□□□□ -0.7
SHTN1-204ENST00000392903 FAM19A3Q7Z5A8 133 aa10.7□□□□□ -0.7
SHTN1-204ENST00000392903 hADV29S1A0JD25 119 aa10.69□□□□□ -0.7
SHTN1-204ENST00000392903 SMIM1B2RUZ4 78 aa10.69□□□□□ -0.7
SHTN1-204ENST00000392903 PRIMA1Q86XR5 153 aa10.69□□□□□ -0.7
SHTN1-204ENST00000392903 PF4P02776 101 aa10.69□□□□□ -0.7
SHTN1-204ENST00000392903 RPL28P46779 137 aaKnown RBP10.69□□□□□ -0.7
SHTN1-204ENST00000392903 C1orf158Q8N1D5 194 aa10.69□□□□□ -0.7
SHTN1-204ENST00000392903 IGHV3-53P01767 116 aa10.68□□□□□ -0.7
SHTN1-204ENST00000392903 RNASE1P07998 156 aaKnown RBP10.68□□□□□ -0.7
SHTN1-204ENST00000392903 DGAT2L7PQ6IED9 249 aa10.68□□□□□ -0.7
SHTN1-204ENST00000392903 WFDC10AQ9H1F0 79 aa10.68□□□□□ -0.7
SHTN1-204ENST00000392903 TRAV25A0A0B4J276 109 aa10.68□□□□□ -0.7
SHTN1-204ENST00000392903 OR13C6PQ8NH95 151 aa10.68□□□□□ -0.7
SHTN1-204ENST00000392903 OVOL2Q9BRP0 275 aa10.67□□□□□ -0.7
SHTN1-204ENST00000392903 Q9HAA7 133 aa10.67□□□□□ -0.7
SHTN1-204ENST00000392903 TMEM258P61165 79 aa10.67□□□□□ -0.7
SHTN1-204ENST00000392903 CYSTM1Q9H1C7 97 aa10.67□□□□□ -0.7
SHTN1-204ENST00000392903 ANK3Q12955 4377 aaKnown RBP10.67□□□□□ -0.7
SHTN1-204ENST00000392903 TRAV13-2A0A0B4J235 113 aa10.66□□□□□ -0.7
SHTN1-204ENST00000392903 DNAL4O96015 105 aa10.66□□□□□ -0.7
SHTN1-204ENST00000392903 Q6JHZ5 121 aa10.66□□□□□ -0.7
SHTN1-204ENST00000392903 TRGV1A0A0A0MS02 117 aa10.66□□□□□ -0.7
SHTN1-204ENST00000392903 SERP2Q8N6R1 65 aa10.66□□□□□ -0.7
SHTN1-204ENST00000392903 TRAV13-1A0A0B4J241 112 aa10.65□□□□□ -0.71
SHTN1-204ENST00000392903 OBSCN-AS1Q96MR7 158 aa10.65□□□□□ -0.71
SHTN1-204ENST00000392903 C16orf95Q9H693 158 aa10.65□□□□□ -0.71
SHTN1-204ENST00000392903 VWFP04275 2813 aa10.65□□□□□ -0.71
SHTN1-204ENST00000392903 UPK3BQ9BT76 320 aa10.64□□□□□ -0.71
SHTN1-204ENST00000392903 OTOGQ6ZRI0 2925 aa10.64□□□□□ -0.71
SHTN1-204ENST00000392903 F5H768 121 aa10.64□□□□□ -0.71
SHTN1-204ENST00000392903 WIPF1O43516 503 aa10.64□□□□□ -0.71
SHTN1-204ENST00000392903 RPL35AP18077 110 aaKnown RBP10.64□□□□□ -0.71
SHTN1-204ENST00000392903 DPH3Q96FX2 82 aa10.64□□□□□ -0.71
SHTN1-204ENST00000392903 RS1O15537 224 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms