RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 LGALS3P17931 250 aaKnown RBP7.93□□□□□ -1.14
SMARCAL1-203ENST00000392128 TM2D3Q9BRN9 247 aa7.93□□□□□ -1.14
SMARCAL1-203ENST00000392128 NOTCH1P46531 2555 aa7.93□□□□□ -1.14
SMARCAL1-203ENST00000392128 IGLV4-60A0A075B6I1 120 aa7.93□□□□□ -1.14
SMARCAL1-203ENST00000392128 TRAV13-1A0A0B4J241 112 aa7.93□□□□□ -1.14
SMARCAL1-203ENST00000392128 IGHV1-58A0A0C4DH39 117 aa7.93□□□□□ -1.14
SMARCAL1-203ENST00000392128 A0A0J9YWU9 116 aa7.93□□□□□ -1.14
SMARCAL1-203ENST00000392128 A0A1B0GUV1 79 aa7.93□□□□□ -1.14
SMARCAL1-203ENST00000392128 H3BNG1 76 aa7.93□□□□□ -1.14
SMARCAL1-203ENST00000392128 H3BRM9 83 aa7.93□□□□□ -1.14
SMARCAL1-203ENST00000392128 COX6A2Q02221 97 aa7.92□□□□□ -1.14
SMARCAL1-203ENST00000392128 TAL2Q16559 108 aa7.92□□□□□ -1.14
SMARCAL1-203ENST00000392128 CDKN2A-AS1Q9UH64 79 aa7.92□□□□□ -1.14
SMARCAL1-203ENST00000392128 IGHV3-64A0A075B6Q5 118 aa7.92□□□□□ -1.14
SMARCAL1-203ENST00000392128 IGHV3-30-3P0DP02 117 aa7.92□□□□□ -1.14
SMARCAL1-203ENST00000392128 SCGB1D4Q6XE38 83 aa7.91□□□□□ -1.14
SMARCAL1-203ENST00000392128 Q6ZTC4 211 aa7.91□□□□□ -1.14
SMARCAL1-203ENST00000392128 NBEAL1Q6ZS30 2694 aa7.91□□□□□ -1.14
SMARCAL1-203ENST00000392128 TRAV8-3A0A0A6YYJ7 113 aa7.91□□□□□ -1.14
SMARCAL1-203ENST00000392128 DEFB121Q5J5C9 76 aa7.91□□□□□ -1.14
SMARCAL1-203ENST00000392128 TMEM262E9PQX1 116 aa7.9□□□□□ -1.14
SMARCAL1-203ENST00000392128 SPINK8P0C7L1 97 aa7.9□□□□□ -1.14
SMARCAL1-203ENST00000392128 C11orf45Q8TAV5 145 aa7.9□□□□□ -1.14
SMARCAL1-203ENST00000392128 TM2D2Q9BX73 214 aa7.9□□□□□ -1.14
SMARCAL1-203ENST00000392128 LELP1Q5T871 98 aa7.9□□□□□ -1.15
SMARCAL1-203ENST00000392128 GTF2H5Q6ZYL4 71 aa7.9□□□□□ -1.15
SMARCAL1-203ENST00000392128 CEND1Q8N111 149 aa7.9□□□□□ -1.15
SMARCAL1-203ENST00000392128 SMIM20Q8N5G0 67 aa7.89□□□□□ -1.15
SMARCAL1-203ENST00000392128 TENM3Q9P273 2699 aa7.89□□□□□ -1.15
SMARCAL1-203ENST00000392128 IGLV5-39A0A0G2JS06 123 aa7.89□□□□□ -1.15
SMARCAL1-203ENST00000392128 GAGE12HA6NDE8 117 aa7.89□□□□□ -1.15
SMARCAL1-203ENST00000392128 A6NDN8 102 aa7.89□□□□□ -1.15
SMARCAL1-203ENST00000392128 GCSHP23434 173 aa7.89□□□□□ -1.15
SMARCAL1-203ENST00000392128 HIST1H4GQ99525 98 aa7.89□□□□□ -1.15
SMARCAL1-203ENST00000392128 NANOS2P60321 138 aaKnown RBP7.88□□□□□ -1.15
SMARCAL1-203ENST00000392128 MGAM2Q2M2H8 2515 aa7.88□□□□□ -1.15
SMARCAL1-203ENST00000392128 SMIM1B2RUZ4 78 aa7.88□□□□□ -1.15
SMARCAL1-203ENST00000392128 FXYD2P54710 66 aa7.88□□□□□ -1.15
SMARCAL1-203ENST00000392128 ZFAND6Q6FIF0 208 aa7.88□□□□□ -1.15
SMARCAL1-203ENST00000392128 MRAPQ8TCY5 172 aa7.88□□□□□ -1.15
SMARCAL1-203ENST00000392128 SPANXB1Q9NS25 103 aaPredicted RBP7.88□□□□□ -1.15
SMARCAL1-203ENST00000392128 ERG28Q9UKR5 140 aa7.88□□□□□ -1.15
SMARCAL1-203ENST00000392128 LYPD5Q6UWN5 251 aa7.87□□□□□ -1.15
SMARCAL1-203ENST00000392128 DEFB131BA0A096LNP1 70 aa7.87□□□□□ -1.15
SMARCAL1-203ENST00000392128 IGKV3OR2-268A0A0C4DH90 116 aa7.87□□□□□ -1.15
SMARCAL1-203ENST00000392128 LINC00959A0A1B0GUT2 108 aa7.87□□□□□ -1.15
SMARCAL1-203ENST00000392128 GAGE10A6NGK3 116 aa7.87□□□□□ -1.15
SMARCAL1-203ENST00000392128 M0QXV9 152 aa7.87□□□□□ -1.15
SMARCAL1-203ENST00000392128 C10orf126Q8N4M7 172 aa7.87□□□□□ -1.15
SMARCAL1-203ENST00000392128 NDUFA12Q9UI09 145 aa7.87□□□□□ -1.15
SMARCAL1-203ENST00000392128 IGHV3OR16-9A0A0B4J2B5 98 aa7.86□□□□□ -1.15
SMARCAL1-203ENST00000392128 A0A0J9YXY3 114 aa7.85□□□□□ -1.15
SMARCAL1-203ENST00000392128 SRSF9Q13242 221 aaKnown RBP eCLIP7.85□□□□□ -1.15
SMARCAL1-203ENST00000392128 NDUFA1O15239 70 aa7.84□□□□□ -1.15
SMARCAL1-203ENST00000392128 SS18Q15532 418 aa7.84□□□□□ -1.15
SMARCAL1-203ENST00000392128 F8WDY8 70 aa7.84□□□□□ -1.15
SMARCAL1-203ENST00000392128 HUWE1Q7Z6Z7 4374 aaKnown RBP7.84□□□□□ -1.16
SMARCAL1-203ENST00000392128 A0A087WZ39 114 aa7.83□□□□□ -1.16
SMARCAL1-203ENST00000392128 J3QR89 54 aa7.83□□□□□ -1.16
SMARCAL1-203ENST00000392128 ANGP03950 147 aaKnown RBP7.83□□□□□ -1.16
SMARCAL1-203ENST00000392128 LINC00269Q8N2A0 174 aa7.83□□□□□ -1.16
SMARCAL1-203ENST00000392128 TRAV10A0A0B4J240 114 aa7.83□□□□□ -1.16
SMARCAL1-203ENST00000392128 IGHV3-30P01768 117 aa7.83□□□□□ -1.16
SMARCAL1-203ENST00000392128 IGHV3-30-5P0DP03 117 aa7.83□□□□□ -1.16
SMARCAL1-203ENST00000392128 Q8N3U1 123 aa7.83□□□□□ -1.16
SMARCAL1-203ENST00000392128 K7EP34 96 aa7.82□□□□□ -1.16
SMARCAL1-203ENST00000392128 SMIM13P0DJ93 91 aa7.82□□□□□ -1.16
SMARCAL1-203ENST00000392128 REG3AQ06141 175 aa7.82□□□□□ -1.16
SMARCAL1-203ENST00000392128 CLPSL2Q6UWE3 100 aa7.82□□□□□ -1.16
SMARCAL1-203ENST00000392128 LITAFQ99732 161 aa7.82□□□□□ -1.16
SMARCAL1-203ENST00000392128 NHP2Q9NX24 153 aaKnown RBP7.82□□□□□ -1.16
SMARCAL1-203ENST00000392128 A0A1B0GWB2 263 aa7.81□□□□□ -1.16
SMARCAL1-203ENST00000392128 TIMM17BO60830 172 aa7.81□□□□□ -1.16
SMARCAL1-203ENST00000392128 LINC01561Q8N1V8 128 aa7.81□□□□□ -1.16
SMARCAL1-203ENST00000392128 XCL1P47992 114 aa7.81□□□□□ -1.16
SMARCAL1-203ENST00000392128 ZNF625Q96I27 306 aaPredicted RBP7.81□□□□□ -1.16
SMARCAL1-203ENST00000392128 Q9H8V8 135 aa7.81□□□□□ -1.16
SMARCAL1-203ENST00000392128 COX7B2Q8TF08 81 aa7.8□□□□□ -1.16
SMARCAL1-203ENST00000392128 B9D2Q9BPU9 175 aa7.8□□□□□ -1.16
SMARCAL1-203ENST00000392128 SPANXDQ9BXN6 97 aa7.8□□□□□ -1.16
SMARCAL1-203ENST00000392128 PRR34Q9NV39 138 aa7.8□□□□□ -1.16
SMARCAL1-203ENST00000392128 SPANXCQ9NY87 97 aa7.8□□□□□ -1.16
SMARCAL1-203ENST00000392128 C9orf118A6NHY6 69 aa7.8□□□□□ -1.16
SMARCAL1-203ENST00000392128 ESRGQ1W209 222 aa7.8□□□□□ -1.16
SMARCAL1-203ENST00000392128 CD164L2Q6UWJ8 174 aa7.8□□□□□ -1.16
SMARCAL1-203ENST00000392128 C5orf38Q86SI9 138 aa7.8□□□□□ -1.16
SMARCAL1-203ENST00000392128 C15orf53Q8NAA6 179 aa7.8□□□□□ -1.16
SMARCAL1-203ENST00000392128 K7ERJ3 54 aa7.79□□□□□ -1.16
SMARCAL1-203ENST00000392128 CHCHD10Q8WYQ3 142 aaPredicted RBP7.79□□□□□ -1.16
SMARCAL1-203ENST00000392128 B5MCH6 92 aa7.79□□□□□ -1.16
SMARCAL1-203ENST00000392128 WFDC10BQ8IUB3 73 aa7.79□□□□□ -1.16
SMARCAL1-203ENST00000392128 RAB37Q96AX2 223 aa7.79□□□□□ -1.16
SMARCAL1-203ENST00000392128 ADAMTSL4-AS1Q5T5F5 129 aa7.78□□□□□ -1.16
SMARCAL1-203ENST00000392128 KLK12Q9UKR0 248 aa7.78□□□□□ -1.16
SMARCAL1-203ENST00000392128 CIRBPQ14011 172 aaKnown RBP7.78□□□□□ -1.16
SMARCAL1-203ENST00000392128 MIAQ16674 131 aa7.78□□□□□ -1.16
SMARCAL1-203ENST00000392128 RPL24P83731 157 aaKnown RBP7.77□□□□□ -1.17
SMARCAL1-203ENST00000392128 MUSTN1Q8IVN3 82 aa7.77□□□□□ -1.17
SMARCAL1-203ENST00000392128 COX7A2LO14548 114 aa7.77□□□□□ -1.17
SMARCAL1-203ENST00000392128 IGHV3-33P01772 117 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms