RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 MT-ATP8P03928 68 aa14□□□□□ -0.17
FOXC1-201ENST00000380874 UBE2WQ96B02 151 aa14□□□□□ -0.17
FOXC1-201ENST00000380874 DEFB4AO15263 64 aa13.99□□□□□ -0.17
FOXC1-201ENST00000380874 CRLF1O75462 422 aa13.99□□□□□ -0.17
FOXC1-201ENST00000380874 PIK3CD-AS1Q5SR53 167 aa13.99□□□□□ -0.17
FOXC1-201ENST00000380874 ATP6V0E2Q8NHE4 81 aa13.99□□□□□ -0.17
FOXC1-201ENST00000380874 TRAV26-1A0A087WT03 109 aa13.98□□□□□ -0.17
FOXC1-201ENST00000380874 TEX49A0A1B0GTD5 131 aa13.98□□□□□ -0.17
FOXC1-201ENST00000380874 APCP25054 2843 aa13.98□□□□□ -0.17
FOXC1-201ENST00000380874 TIRAPP58753 221 aa13.97□□□□□ -0.17
FOXC1-201ENST00000380874 GAGE2BQ13066 116 aa13.97□□□□□ -0.17
FOXC1-201ENST00000380874 GAGE2EQ4V326 116 aa13.97□□□□□ -0.17
FOXC1-201ENST00000380874 GAGE2DQ9UEU5 116 aa13.97□□□□□ -0.17
FOXC1-201ENST00000380874 IFITM1P13164 125 aa13.97□□□□□ -0.17
FOXC1-201ENST00000380874 C6orf226Q5I0X4 101 aa13.96□□□□□ -0.17
FOXC1-201ENST00000380874 PAX4O43316 350 aa13.96□□□□□ -0.18
FOXC1-201ENST00000380874 XCL1P47992 114 aa13.96□□□□□ -0.18
FOXC1-201ENST00000380874 NDUFA1O15239 70 aa13.95□□□□□ -0.18
FOXC1-201ENST00000380874 NTM-AS1Q6ZSK4 140 aa13.95□□□□□ -0.18
FOXC1-201ENST00000380874 LINC00308Q8TCZ7 52 aa13.95□□□□□ -0.18
FOXC1-201ENST00000380874 CRPP02741 224 aa13.95□□□□□ -0.18
FOXC1-201ENST00000380874 GYPEP15421 78 aa13.95□□□□□ -0.18
FOXC1-201ENST00000380874 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.95□□□□□ -0.18
FOXC1-201ENST00000380874 SPATA25Q9BR10 227 aa13.95□□□□□ -0.18
FOXC1-201ENST00000380874 COL6A5A8TX70 2615 aa13.94□□□□□ -0.18
FOXC1-201ENST00000380874 SPANXDQ9BXN6 97 aa13.94□□□□□ -0.18
FOXC1-201ENST00000380874 SPANXCQ9NY87 97 aa13.94□□□□□ -0.18
FOXC1-201ENST00000380874 TRBV10-2A0A0K0K1G8 114 aa13.94□□□□□ -0.18
FOXC1-201ENST00000380874 KRTAP1-3Q8IUG1 177 aa13.94□□□□□ -0.18
FOXC1-201ENST00000380874 A8MTW9 85 aa13.93□□□□□ -0.18
FOXC1-201ENST00000380874 CDC42SE2Q9NRR3 84 aa13.93□□□□□ -0.18
FOXC1-201ENST00000380874 TRBV30A0A0K0K1B3 111 aa13.93□□□□□ -0.18
FOXC1-201ENST00000380874 RNASE1P07998 156 aaKnown RBP13.92□□□□□ -0.18
FOXC1-201ENST00000380874 EDA2RQ9HAV5 297 aa13.92□□□□□ -0.18
FOXC1-201ENST00000380874 DNAL4O96015 105 aa13.92□□□□□ -0.18
FOXC1-201ENST00000380874 EIF4EBP3O60516 100 aaPredicted RBP13.92□□□□□ -0.18
FOXC1-201ENST00000380874 XGP55808 180 aa13.92□□□□□ -0.18
FOXC1-201ENST00000380874 CLUHP3Q96NS8 147 aa13.92□□□□□ -0.18
FOXC1-201ENST00000380874 SMIM1B2RUZ4 78 aa13.91□□□□□ -0.18
FOXC1-201ENST00000380874 MIR7-3HGQ8N6C7 128 aa13.91□□□□□ -0.18
FOXC1-201ENST00000380874 LINC00482Q8N8I6 264 aa13.91□□□□□ -0.18
FOXC1-201ENST00000380874 INAFM1C9JVW0 142 aa13.91□□□□□ -0.18
FOXC1-201ENST00000380874 FHL3Q13643 280 aa13.91□□□□□ -0.18
FOXC1-201ENST00000380874 NBEAL2Q6ZNJ1 2754 aa13.9□□□□□ -0.18
FOXC1-201ENST00000380874 COX7B2Q8TF08 81 aa13.9□□□□□ -0.18
FOXC1-201ENST00000380874 FAM104AQ969W3 186 aa13.9□□□□□ -0.18
FOXC1-201ENST00000380874 UBR5O95071 2799 aaPredicted RBP13.9□□□□□ -0.19
FOXC1-201ENST00000380874 IGLV1-51P01701 117 aa13.89□□□□□ -0.19
FOXC1-201ENST00000380874 LITAFQ99732 161 aa13.89□□□□□ -0.19
FOXC1-201ENST00000380874 C3orf56Q8N813 242 aa13.88□□□□□ -0.19
FOXC1-201ENST00000380874 DEFB135Q30KP9 77 aa13.88□□□□□ -0.19
FOXC1-201ENST00000380874 IGLV10-54A0A075B6I4 117 aa13.88□□□□□ -0.19
FOXC1-201ENST00000380874 IGLV4-60A0A075B6I1 120 aa13.87□□□□□ -0.19
FOXC1-201ENST00000380874 SND1-IT1Q9HBX3 110 aa13.87□□□□□ -0.19
FOXC1-201ENST00000380874 HERV-K104P63124 156 aa13.87□□□□□ -0.19
FOXC1-201ENST00000380874 TRBV6-4A0A1B0GX49 114 aa13.86□□□□□ -0.19
FOXC1-201ENST00000380874 SS18Q15532 418 aa13.86□□□□□ -0.19
FOXC1-201ENST00000380874 TRBV6-8A0A0A6YYG3 113 aa13.86□□□□□ -0.19
FOXC1-201ENST00000380874 C15orf53Q8NAA6 179 aa13.86□□□□□ -0.19
FOXC1-201ENST00000380874 CDIP1Q9H305 208 aa13.86□□□□□ -0.19
FOXC1-201ENST00000380874 MALP21145 153 aa13.85□□□□□ -0.19
FOXC1-201ENST00000380874 SS18L2Q9UHA2 77 aa13.85□□□□□ -0.19
FOXC1-201ENST00000380874 B5MCH6 92 aa13.85□□□□□ -0.19
FOXC1-201ENST00000380874 H7C423 109 aa13.84□□□□□ -0.19
FOXC1-201ENST00000380874 TIMM17BO60830 172 aa13.84□□□□□ -0.19
FOXC1-201ENST00000380874 HILS1P60008 231 aa13.84□□□□□ -0.19
FOXC1-201ENST00000380874 F5H768 121 aa13.84□□□□□ -0.19
FOXC1-201ENST00000380874 CFAP161Q6P656 301 aa13.84□□□□□ -0.19
FOXC1-201ENST00000380874 Q9HAA7 133 aa13.83□□□□□ -0.2
FOXC1-201ENST00000380874 ANGP03950 147 aaKnown RBP13.83□□□□□ -0.2
FOXC1-201ENST00000380874 DAD1P61803 113 aa13.82□□□□□ -0.2
FOXC1-201ENST00000380874 FAM222AQ5U5X8 452 aa13.82□□□□□ -0.2
FOXC1-201ENST00000380874 NBEAL1Q6ZS30 2694 aa13.82□□□□□ -0.2
FOXC1-201ENST00000380874 BAALC-AS2P0C853 105 aa13.82□□□□□ -0.2
FOXC1-201ENST00000380874 H3BT86 120 aa13.81□□□□□ -0.2
FOXC1-201ENST00000380874 LST1O00453 97 aa13.81□□□□□ -0.2
FOXC1-201ENST00000380874 FHL2Q14192 279 aa13.81□□□□□ -0.2
FOXC1-201ENST00000380874 GIG44P09565 113 aaPredicted RBP13.81□□□□□ -0.2
FOXC1-201ENST00000380874 TRAV13-2A0A0B4J235 113 aa13.8□□□□□ -0.2
FOXC1-201ENST00000380874 IGLV5-39A0A0G2JS06 123 aa13.79□□□□□ -0.2
FOXC1-201ENST00000380874 SOSTDC1Q6X4U4 206 aa13.79□□□□□ -0.2
FOXC1-201ENST00000380874 COX7A2LO14548 114 aa13.79□□□□□ -0.2
FOXC1-201ENST00000380874 CSDC2Q9Y534 153 aaKnown RBP13.79□□□□□ -0.2
FOXC1-201ENST00000380874 IGLV5-45A0A087WSX0 123 aa13.78□□□□□ -0.2
FOXC1-201ENST00000380874 LY6G6DO95868 133 aa13.78□□□□□ -0.2
FOXC1-201ENST00000380874 GAGE2AQ6NT46 116 aa13.77□□□□□ -0.2
FOXC1-201ENST00000380874 C16orf95Q9H693 158 aa13.77□□□□□ -0.2
FOXC1-201ENST00000380874 PRO0255Q9UI72 69 aa13.77□□□□□ -0.21
FOXC1-201ENST00000380874 ATP5G1P05496 136 aa13.76□□□□□ -0.21
FOXC1-201ENST00000380874 RNF183Q96D59 192 aa13.76□□□□□ -0.21
FOXC1-201ENST00000380874 NIPBLQ6KC79 2804 aaeCLIP13.76□□□□□ -0.21
FOXC1-201ENST00000380874 SBSPONQ8IVN8 264 aa13.75□□□□□ -0.21
FOXC1-201ENST00000380874 LINC00269Q8N2A0 174 aa13.74□□□□□ -0.21
FOXC1-201ENST00000380874 NOTCH1P46531 2555 aa13.74□□□□□ -0.21
FOXC1-201ENST00000380874 LINC00959A0A1B0GUT2 108 aa13.73□□□□□ -0.21
FOXC1-201ENST00000380874 C9orf66Q5T8R8 295 aa13.73□□□□□ -0.21
FOXC1-201ENST00000380874 DEFB121Q5J5C9 76 aa13.73□□□□□ -0.21
FOXC1-201ENST00000380874 IL17DQ8TAD2 202 aa13.73□□□□□ -0.21
FOXC1-201ENST00000380874 OVOL2Q9BRP0 275 aa13.73□□□□□ -0.21
FOXC1-201ENST00000380874 PLAC8L1A1L4L8 177 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms