RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 CITED1Q99966 193 aa8.62□□□□□ -1.03
RFC3-201ENST00000380071 F5H768 121 aa8.61□□□□□ -1.03
RFC3-201ENST00000380071 COX6CP09669 75 aa8.61□□□□□ -1.03
RFC3-201ENST00000380071 SOSTDC1Q6X4U4 206 aa8.61□□□□□ -1.03
RFC3-201ENST00000380071 TENM4Q6N022 2769 aa8.61□□□□□ -1.03
RFC3-201ENST00000380071 LINC01600Q96MT4 127 aa8.61□□□□□ -1.03
RFC3-201ENST00000380071 PDZD2O15018 2839 aa8.61□□□□□ -1.03
RFC3-201ENST00000380071 CRLF1O75462 422 aa8.6□□□□□ -1.03
RFC3-201ENST00000380071 IGLV1-51P01701 117 aa8.6□□□□□ -1.03
RFC3-201ENST00000380071 CSNK1G2-AS1Q8NCQ2 148 aa8.6□□□□□ -1.03
RFC3-201ENST00000380071 C16orf74Q96GX8 76 aa8.6□□□□□ -1.03
RFC3-201ENST00000380071 MTORP42345 2549 aa8.6□□□□□ -1.03
RFC3-201ENST00000380071 UBE2L6O14933 153 aa8.6□□□□□ -1.03
RFC3-201ENST00000380071 C2orf82Q6UX34 121 aa8.6□□□□□ -1.03
RFC3-201ENST00000380071 TMEM243Q9BU79 118 aa8.6□□□□□ -1.03
RFC3-201ENST00000380071 RNASE1P07998 156 aaKnown RBP8.59□□□□□ -1.03
RFC3-201ENST00000380071 PRIMA1Q86XR5 153 aa8.59□□□□□ -1.03
RFC3-201ENST00000380071 C16orf95Q9H693 158 aa8.59□□□□□ -1.03
RFC3-201ENST00000380071 LST1O00453 97 aa8.59□□□□□ -1.03
RFC3-201ENST00000380071 UBE2WQ96B02 151 aa8.59□□□□□ -1.03
RFC3-201ENST00000380071 MEIG1Q5JSS6 88 aa8.58□□□□□ -1.04
RFC3-201ENST00000380071 TRGV4A0A0C4DH28 118 aa8.58□□□□□ -1.04
RFC3-201ENST00000380071 IGKV3OR2-268A0A0C4DH90 116 aa8.58□□□□□ -1.04
RFC3-201ENST00000380071 CMC4P56277 68 aaPredicted RBP8.58□□□□□ -1.04
RFC3-201ENST00000380071 TRBV6-4A0A1B0GX49 114 aa8.57□□□□□ -1.04
RFC3-201ENST00000380071 GAGE6Q13070 117 aa8.57□□□□□ -1.04
RFC3-201ENST00000380071 OVOL2Q9BRP0 275 aa8.57□□□□□ -1.04
RFC3-201ENST00000380071 ANAPC13Q9BS18 74 aa8.56□□□□□ -1.04
RFC3-201ENST00000380071 IGLV4-60A0A075B6I1 120 aa8.56□□□□□ -1.04
RFC3-201ENST00000380071 TRAV8-4A0A0B4J246 113 aa8.56□□□□□ -1.04
RFC3-201ENST00000380071 FHL2Q14192 279 aa8.56□□□□□ -1.04
RFC3-201ENST00000380071 SNCGO76070 127 aa8.55□□□□□ -1.04
RFC3-201ENST00000380071 H3BT86 120 aa8.55□□□□□ -1.04
RFC3-201ENST00000380071 NHLRC4P0CG21 123 aaPredicted RBP8.55□□□□□ -1.04
RFC3-201ENST00000380071 FAM110AQ9BQ89 295 aa8.55□□□□□ -1.04
RFC3-201ENST00000380071 ITPR2Q14571 2701 aa8.55□□□□□ -1.04
RFC3-201ENST00000380071 TRBV6-8A0A0A6YYG3 113 aa8.53□□□□□ -1.04
RFC3-201ENST00000380071 HERV-K104P63124 156 aa8.53□□□□□ -1.04
RFC3-201ENST00000380071 GAGE2BQ13066 116 aa8.53□□□□□ -1.04
RFC3-201ENST00000380071 GAGE2EQ4V326 116 aa8.53□□□□□ -1.04
RFC3-201ENST00000380071 SHISA2Q6UWI4 295 aa8.53□□□□□ -1.04
RFC3-201ENST00000380071 TOMM7Q9P0U1 55 aa8.53□□□□□ -1.04
RFC3-201ENST00000380071 GAGE2DQ9UEU5 116 aa8.53□□□□□ -1.04
RFC3-201ENST00000380071 C15orf53Q8NAA6 179 aa8.53□□□□□ -1.04
RFC3-201ENST00000380071 DEFB130BP0DP73 79 aa8.52□□□□□ -1.05
RFC3-201ENST00000380071 DEFB130AP0DP74 79 aa8.52□□□□□ -1.05
RFC3-201ENST00000380071 KRTAP10-3P60369 221 aa8.52□□□□□ -1.05
RFC3-201ENST00000380071 COX7B2Q8TF08 81 aa8.52□□□□□ -1.05
RFC3-201ENST00000380071 CHCHD5Q9BSY4 110 aa8.52□□□□□ -1.05
RFC3-201ENST00000380071 COX7A2LO14548 114 aa8.52□□□□□ -1.05
RFC3-201ENST00000380071 SMR3AQ99954 134 aa8.52□□□□□ -1.05
RFC3-201ENST00000380071 FN1P02751 2386 aaKnown RBP8.51□□□□□ -1.05
RFC3-201ENST00000380071 NDUFV3P56181 108 aaKnown RBP8.51□□□□□ -1.05
RFC3-201ENST00000380071 TTC32Q5I0X7 151 aa8.51□□□□□ -1.05
RFC3-201ENST00000380071 COPS9Q8WXC6 57 aa8.51□□□□□ -1.05
RFC3-201ENST00000380071 HILS1P60008 231 aa8.51□□□□□ -1.05
RFC3-201ENST00000380071 MIR7-3HGQ8N6C7 128 aa8.51□□□□□ -1.05
RFC3-201ENST00000380071 IGHV3OR16-9A0A0B4J2B5 98 aa8.5□□□□□ -1.05
RFC3-201ENST00000380071 C5orf38Q86SI9 138 aa8.5□□□□□ -1.05
RFC3-201ENST00000380071 DEFB121Q5J5C9 76 aa8.49□□□□□ -1.05
RFC3-201ENST00000380071 FAM218AQ96MZ4 157 aa8.49□□□□□ -1.05
RFC3-201ENST00000380071 Q6Q795 121 aa8.48□□□□□ -1.05
RFC3-201ENST00000380071 NBEAL2Q6ZNJ1 2754 aa8.48□□□□□ -1.05
RFC3-201ENST00000380071 IGKV2-28A0A075B6P5 120 aa8.48□□□□□ -1.05
RFC3-201ENST00000380071 FAM240AA0A1B0GVK7 77 aa8.48□□□□□ -1.05
RFC3-201ENST00000380071 IGKV2D-28P01615 120 aa8.48□□□□□ -1.05
RFC3-201ENST00000380071 LINC00158P58513 81 aa8.48□□□□□ -1.05
RFC3-201ENST00000380071 LINC00337Q8N6G1 96 aa8.48□□□□□ -1.05
RFC3-201ENST00000380071 SVIPQ8NHG7 77 aa8.47□□□□□ -1.05
RFC3-201ENST00000380071 SPATA3Q8NHX4 192 aa8.47□□□□□ -1.05
RFC3-201ENST00000380071 A0A087WZ39 114 aa8.46□□□□□ -1.05
RFC3-201ENST00000380071 LINC00959A0A1B0GUT2 108 aa8.46□□□□□ -1.05
RFC3-201ENST00000380071 PF4P02776 101 aa8.46□□□□□ -1.05
RFC3-201ENST00000380071 GYPEP15421 78 aa8.46□□□□□ -1.05
RFC3-201ENST00000380071 SND1-IT1Q9HBX3 110 aa8.46□□□□□ -1.05
RFC3-201ENST00000380071 A0A096LPF7 62 aa8.46□□□□□ -1.06
RFC3-201ENST00000380071 B5MCH6 92 aa8.46□□□□□ -1.06
RFC3-201ENST00000380071 KIR2DL5BQ8NHK3 375 aa8.46□□□□□ -1.06
RFC3-201ENST00000380071 SS18L2Q9UHA2 77 aa8.46□□□□□ -1.06
RFC3-201ENST00000380071 CCDC179H3BU77 68 aa8.45□□□□□ -1.06
RFC3-201ENST00000380071 PFN2P35080 140 aa8.45□□□□□ -1.06
RFC3-201ENST00000380071 LINC00482Q8N8I6 264 aa8.45□□□□□ -1.06
RFC3-201ENST00000380071 X6R8D5 127 aa8.45□□□□□ -1.06
RFC3-201ENST00000380071 TRAV13-2A0A0B4J235 113 aa8.45□□□□□ -1.06
RFC3-201ENST00000380071 CCL18P55774 89 aa8.45□□□□□ -1.06
RFC3-201ENST00000380071 LINC00612Q8N6U2 182 aa8.45□□□□□ -1.06
RFC3-201ENST00000380071 C11orf68Q9H3H3 251 aaKnown RBP8.45□□□□□ -1.06
RFC3-201ENST00000380071 PPDPFQ9H3Y8 114 aa8.45□□□□□ -1.06
RFC3-201ENST00000380071 C22orf24Q9Y442 160 aa8.45□□□□□ -1.06
RFC3-201ENST00000380071 GCN1Q92616 2671 aaKnown RBP8.45□□□□□ -1.06
RFC3-201ENST00000380071 CRPP02741 224 aa8.44□□□□□ -1.06
RFC3-201ENST00000380071 BAALC-AS2P0C853 105 aa8.44□□□□□ -1.06
RFC3-201ENST00000380071 Q9HAA7 133 aa8.44□□□□□ -1.06
RFC3-201ENST00000380071 HIVEP2P31629 2446 aa8.44□□□□□ -1.06
RFC3-201ENST00000380071 TRACP01848 142 aa8.44□□□□□ -1.06
RFC3-201ENST00000380071 RPL28P46779 137 aaKnown RBP8.44□□□□□ -1.06
RFC3-201ENST00000380071 XCL1P47992 114 aa8.44□□□□□ -1.06
RFC3-201ENST00000380071 CLPSL2Q6UWE3 100 aa8.44□□□□□ -1.06
RFC3-201ENST00000380071 VWFP04275 2813 aa8.43□□□□□ -1.06
RFC3-201ENST00000380071 MRPL23Q16540 153 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms