RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 M0R2N4 97 aa8.22□□□□□ -1.09
SMAD9-202ENST00000379826 DEFB4AO15263 64 aa8.22□□□□□ -1.09
SMAD9-202ENST00000379826 LINC00242Q5T6M2 205 aa8.22□□□□□ -1.09
SMAD9-202ENST00000379826 LINC00643Q86TS7 51 aa8.22□□□□□ -1.09
SMAD9-202ENST00000379826 PKIGQ9Y2B9 76 aa8.22□□□□□ -1.09
SMAD9-202ENST00000379826 IGKV2D-24A0A075B6R9 120 aa8.22□□□□□ -1.09
SMAD9-202ENST00000379826 TIMM17BO60830 172 aa8.22□□□□□ -1.09
SMAD9-202ENST00000379826 LINC01006Q8NI28 216 aa8.21□□□□□ -1.09
SMAD9-202ENST00000379826 ANKRD11Q6UB99 2663 aaPredicted RBP8.21□□□□□ -1.1
SMAD9-202ENST00000379826 HAMPP81172 84 aa8.21□□□□□ -1.1
SMAD9-202ENST00000379826 LOC400499M0QZD8 3231 aa8.2□□□□□ -1.1
SMAD9-202ENST00000379826 NHLRC4P0CG21 123 aaPredicted RBP8.2□□□□□ -1.1
SMAD9-202ENST00000379826 H0YGX0 51 aa8.2□□□□□ -1.1
SMAD9-202ENST00000379826 SORL1Q92673 2214 aa8.2□□□□□ -1.1
SMAD9-202ENST00000379826 NUPR2A6NF83 97 aa8.19□□□□□ -1.1
SMAD9-202ENST00000379826 SMIM1B2RUZ4 78 aa8.19□□□□□ -1.1
SMAD9-202ENST00000379826 NOTCH3Q9UM47 2321 aa8.19□□□□□ -1.1
SMAD9-202ENST00000379826 TRBV10-1A0A0K0K1A3 114 aa8.19□□□□□ -1.1
SMAD9-202ENST00000379826 CITED1Q99966 193 aa8.19□□□□□ -1.1
SMAD9-202ENST00000379826 UBL5Q9BZL1 73 aa8.19□□□□□ -1.1
SMAD9-202ENST00000379826 SBSPONQ8IVN8 264 aa8.18□□□□□ -1.1
SMAD9-202ENST00000379826 C3orf22Q8N5N4 141 aa8.18□□□□□ -1.1
SMAD9-202ENST00000379826 SMIM11BQ8TCY0 68 aa8.18□□□□□ -1.1
SMAD9-202ENST00000379826 ATOX1O00244 68 aa8.18□□□□□ -1.1
SMAD9-202ENST00000379826 BRI3O95415 125 aa8.17□□□□□ -1.1
SMAD9-202ENST00000379826 CDC42SE2Q9NRR3 84 aa8.17□□□□□ -1.1
SMAD9-202ENST00000379826 A0A087WYN8 130 aa8.17□□□□□ -1.1
SMAD9-202ENST00000379826 ZNF561-AS1K7EIQ3 104 aa8.17□□□□□ -1.1
SMAD9-202ENST00000379826 Q6Q795 121 aa8.16□□□□□ -1.1
SMAD9-202ENST00000379826 CEP295Q9C0D2 2601 aa8.16□□□□□ -1.1
SMAD9-202ENST00000379826 KLK9Q2XQG4 91 aa8.16□□□□□ -1.1
SMAD9-202ENST00000379826 FSHBP01225 129 aa8.16□□□□□ -1.1
SMAD9-202ENST00000379826 KRTAP24-1Q3LI83 254 aa8.16□□□□□ -1.1
SMAD9-202ENST00000379826 Q8N2B8 174 aa8.16□□□□□ -1.1
SMAD9-202ENST00000379826 WFDC9Q8NEX5 89 aa8.16□□□□□ -1.1
SMAD9-202ENST00000379826 TRAV25A0A0B4J276 109 aa8.15□□□□□ -1.1
SMAD9-202ENST00000379826 EIF4EBP3O60516 100 aaPredicted RBP8.15□□□□□ -1.1
SMAD9-202ENST00000379826 LRRK2Q5S007 2527 aa8.15□□□□□ -1.1
SMAD9-202ENST00000379826 SMG1Q96Q15 3661 aaKnown RBP8.15□□□□□ -1.1
SMAD9-202ENST00000379826 LITAFQ99732 161 aa8.15□□□□□ -1.1
SMAD9-202ENST00000379826 M0QXV9 152 aa8.15□□□□□ -1.1
SMAD9-202ENST00000379826 ODF3L2Q3SX64 289 aa8.15□□□□□ -1.11
SMAD9-202ENST00000379826 DSCR8Q96T75 97 aa8.15□□□□□ -1.11
SMAD9-202ENST00000379826 hADV29S1A0JD25 119 aa8.14□□□□□ -1.11
SMAD9-202ENST00000379826 ABCA2Q9BZC7 2435 aa8.14□□□□□ -1.11
SMAD9-202ENST00000379826 TRAV23DV6A0A075B6W5 121 aa8.14□□□□□ -1.11
SMAD9-202ENST00000379826 TRBV6-8A0A0A6YYG3 113 aa8.14□□□□□ -1.11
SMAD9-202ENST00000379826 C1orf158Q8N1D5 194 aa8.14□□□□□ -1.11
SMAD9-202ENST00000379826 UQCRQO14949 82 aa8.14□□□□□ -1.11
SMAD9-202ENST00000379826 LINC00269Q8N2A0 174 aa8.14□□□□□ -1.11
SMAD9-202ENST00000379826 MUC4Q99102 2169 aa8.14□□□□□ -1.11
SMAD9-202ENST00000379826 DEFB131BA0A096LNP1 70 aa8.13□□□□□ -1.11
SMAD9-202ENST00000379826 UBE2BP63146 152 aa8.13□□□□□ -1.11
SMAD9-202ENST00000379826 CXCL5P42830 114 aa8.13□□□□□ -1.11
SMAD9-202ENST00000379826 LINC00482Q8N8I6 264 aa8.13□□□□□ -1.11
SMAD9-202ENST00000379826 IGLV4-60A0A075B6I1 120 aa8.12□□□□□ -1.11
SMAD9-202ENST00000379826 J3KT08 172 aa8.12□□□□□ -1.11
SMAD9-202ENST00000379826 C11orf72Q8NBR9 251 aa8.12□□□□□ -1.11
SMAD9-202ENST00000379826 FAM240AA0A1B0GVK7 77 aa8.12□□□□□ -1.11
SMAD9-202ENST00000379826 SPTBN4Q9H254 2564 aa8.12□□□□□ -1.11
SMAD9-202ENST00000379826 C1orf43Q9BWL3 253 aa8.12□□□□□ -1.11
SMAD9-202ENST00000379826 TRAV10A0A0B4J240 114 aa8.12□□□□□ -1.11
SMAD9-202ENST00000379826 A0A087WVE0 104 aa8.11□□□□□ -1.11
SMAD9-202ENST00000379826 PRR3P79522 188 aaKnown RBP8.11□□□□□ -1.11
SMAD9-202ENST00000379826 DCHS1Q96JQ0 3298 aa8.11□□□□□ -1.11
SMAD9-202ENST00000379826 SOSTDC1Q6X4U4 206 aa8.11□□□□□ -1.11
SMAD9-202ENST00000379826 ENHOQ6UWT2 76 aa8.11□□□□□ -1.11
SMAD9-202ENST00000379826 FAM218AQ96MZ4 157 aa8.11□□□□□ -1.11
SMAD9-202ENST00000379826 TNRC18O15417 2968 aaPredicted RBP8.11□□□□□ -1.11
SMAD9-202ENST00000379826 IBA57-AS1B1ANH7 110 aa8.11□□□□□ -1.11
SMAD9-202ENST00000379826 GHRHP01286 108 aa8.1□□□□□ -1.11
SMAD9-202ENST00000379826 LINC00526Q96FQ7 95 aa8.1□□□□□ -1.11
SMAD9-202ENST00000379826 WWC2-AS2Q96NR7 200 aa8.1□□□□□ -1.11
SMAD9-202ENST00000379826 C2CD3Q4AC94 2353 aa8.1□□□□□ -1.11
SMAD9-202ENST00000379826 AKAP13Q12802 2813 aa8.1□□□□□ -1.11
SMAD9-202ENST00000379826 TRBV6-4A0A1B0GX49 114 aa8.1□□□□□ -1.11
SMAD9-202ENST00000379826 BEAN1Q3B7T3 259 aa8.1□□□□□ -1.11
SMAD9-202ENST00000379826 LINC00959A0A1B0GUT2 108 aa8.09□□□□□ -1.11
SMAD9-202ENST00000379826 NTM-AS1Q6ZSK4 140 aa8.09□□□□□ -1.11
SMAD9-202ENST00000379826 TMEM256-PLSCR3K7ERE1 68 aa8.09□□□□□ -1.11
SMAD9-202ENST00000379826 LINC00337Q8N6G1 96 aa8.08□□□□□ -1.12
SMAD9-202ENST00000379826 DEFB105AQ8NG35 78 aa8.08□□□□□ -1.12
SMAD9-202ENST00000379826 IMUPQ9GZP8 106 aa8.08□□□□□ -1.12
SMAD9-202ENST00000379826 LAMA5O15230 3695 aa8.08□□□□□ -1.12
SMAD9-202ENST00000379826 CHCHD10Q8WYQ3 142 aaPredicted RBP8.08□□□□□ -1.12
SMAD9-202ENST00000379826 PKD1L2Q7Z442 2459 aa8.08□□□□□ -1.12
SMAD9-202ENST00000379826 FAM222AQ5U5X8 452 aa8.08□□□□□ -1.12
SMAD9-202ENST00000379826 UPK3BQ9BT76 320 aa8.08□□□□□ -1.12
SMAD9-202ENST00000379826 JMJD7-PLA2G4BH0Y9G9 81 aa8.08□□□□□ -1.12
SMAD9-202ENST00000379826 RPL18AQ02543 176 aaKnown RBP8.08□□□□□ -1.12
SMAD9-202ENST00000379826 LRCOL1A6NCL2 159 aa8.07□□□□□ -1.12
SMAD9-202ENST00000379826 CDK2AP2O75956 126 aa8.07□□□□□ -1.12
SMAD9-202ENST00000379826 RPL28P46779 137 aaKnown RBP8.07□□□□□ -1.12
SMAD9-202ENST00000379826 REG3AQ06141 175 aa8.07□□□□□ -1.12
SMAD9-202ENST00000379826 C4orf48Q5BLP8 95 aa8.07□□□□□ -1.12
SMAD9-202ENST00000379826 IGLV5-39A0A0G2JS06 123 aa8.07□□□□□ -1.12
SMAD9-202ENST00000379826 WNK1Q9H4A3 2382 aa8.07□□□□□ -1.12
SMAD9-202ENST00000379826 ABCA12Q86UK0 2595 aa8.07□□□□□ -1.12
SMAD9-202ENST00000379826 MUC3AQ02505 3323 aa8.07□□□□□ -1.12
SMAD9-202ENST00000379826 RBM3P98179 157 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms