RNA–Protein interactions for RNA: ENST00000378633.5

CDK11A-205, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best) BASIC

Gene CDK11A, Length 2,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-205ENST00000378633 CLEC2BQ92478 149 aa13.25□□□□□ -0.29
CDK11A-205ENST00000378633 SETD2Q9BYW2 2564 aaPredicted RBP13.25□□□□□ -0.29
CDK11A-205ENST00000378633 NOTCH3Q9UM47 2321 aa13.25□□□□□ -0.29
CDK11A-205ENST00000378633 JMJD1CQ15652 2540 aa13.25□□□□□ -0.29
CDK11A-205ENST00000378633 A0A0U1RRA0 63 aa13.24□□□□□ -0.29
CDK11A-205ENST00000378633 H7C423 109 aa13.24□□□□□ -0.29
CDK11A-205ENST00000378633 PRIMA1Q86XR5 153 aa13.24□□□□□ -0.29
CDK11A-205ENST00000378633 ANK3Q12955 4377 aaKnown RBP13.24□□□□□ -0.29
CDK11A-205ENST00000378633 LST1O00453 97 aa13.24□□□□□ -0.29
CDK11A-205ENST00000378633 PLA2G2AP14555 144 aa13.23□□□□□ -0.29
CDK11A-205ENST00000378633 SOSTDC1Q6X4U4 206 aa13.23□□□□□ -0.29
CDK11A-205ENST00000378633 PDZD2O15018 2839 aa13.23□□□□□ -0.29
CDK11A-205ENST00000378633 C2orf82Q6UX34 121 aa13.23□□□□□ -0.29
CDK11A-205ENST00000378633 TRGV4A0A0C4DH28 118 aa13.22□□□□□ -0.29
CDK11A-205ENST00000378633 TEX49A0A1B0GTD5 131 aa13.22□□□□□ -0.29
CDK11A-205ENST00000378633 TENM4Q6N022 2769 aa13.22□□□□□ -0.29
CDK11A-205ENST00000378633 COPS9Q8WXC6 57 aa13.22□□□□□ -0.29
CDK11A-205ENST00000378633 H3BT86 120 aa13.22□□□□□ -0.29
CDK11A-205ENST00000378633 HERV-K104P63124 156 aa13.22□□□□□ -0.29
CDK11A-205ENST00000378633 MEIG1Q5JSS6 88 aa13.22□□□□□ -0.29
CDK11A-205ENST00000378633 C2CD3Q4AC94 2353 aa13.21□□□□□ -0.29
CDK11A-205ENST00000378633 ACANP16112 2415 aa13.21□□□□□ -0.3
CDK11A-205ENST00000378633 A0A1B0GV72 72 aa13.2□□□□□ -0.3
CDK11A-205ENST00000378633 UBE2WQ96B02 151 aa13.2□□□□□ -0.3
CDK11A-205ENST00000378633 HILS1P60008 231 aa13.2□□□□□ -0.3
CDK11A-205ENST00000378633 FHL2Q14192 279 aa13.2□□□□□ -0.3
CDK11A-205ENST00000378633 GAGE6Q13070 117 aa13.18□□□□□ -0.3
CDK11A-205ENST00000378633 MTORP42345 2549 aa13.17□□□□□ -0.3
CDK11A-205ENST00000378633 TRBV6-8A0A0A6YYG3 113 aa13.17□□□□□ -0.3
CDK11A-205ENST00000378633 CKS1BP61024 79 aa13.17□□□□□ -0.3
CDK11A-205ENST00000378633 PPDPFQ9H3Y8 114 aa13.17□□□□□ -0.3
CDK11A-205ENST00000378633 SHISA2Q6UWI4 295 aa13.16□□□□□ -0.3
CDK11A-205ENST00000378633 IGLV4-60A0A075B6I1 120 aa13.16□□□□□ -0.3
CDK11A-205ENST00000378633 COX7A2LO14548 114 aa13.15□□□□□ -0.3
CDK11A-205ENST00000378633 COX7B2Q8TF08 81 aa13.15□□□□□ -0.3
CDK11A-205ENST00000378633 TRAV8-4A0A0B4J246 113 aa13.14□□□□□ -0.31
CDK11A-205ENST00000378633 IGKV3OR2-268A0A0C4DH90 116 aa13.14□□□□□ -0.31
CDK11A-205ENST00000378633 CHCHD5Q9BSY4 110 aa13.14□□□□□ -0.31
CDK11A-205ENST00000378633 CITED1Q99966 193 aa13.13□□□□□ -0.31
CDK11A-205ENST00000378633 IGHV3OR16-9A0A0B4J2B5 98 aa13.12□□□□□ -0.31
CDK11A-205ENST00000378633 KRTAP10-3P60369 221 aa13.12□□□□□ -0.31
CDK11A-205ENST00000378633 DEFB121Q5J5C9 76 aa13.11□□□□□ -0.31
CDK11A-205ENST00000378633 KIR2DL5BQ8NHK3 375 aa13.11□□□□□ -0.31
CDK11A-205ENST00000378633 DEFB130BP0DP73 79 aa13.11□□□□□ -0.31
CDK11A-205ENST00000378633 DEFB130AP0DP74 79 aa13.11□□□□□ -0.31
CDK11A-205ENST00000378633 TOMM7Q9P0U1 55 aa13.11□□□□□ -0.31
CDK11A-205ENST00000378633 LINC00612Q8N6U2 182 aa13.1□□□□□ -0.31
CDK11A-205ENST00000378633 ITPR2Q14571 2701 aa13.1□□□□□ -0.31
CDK11A-205ENST00000378633 CRLF1O75462 422 aa13.09□□□□□ -0.31
CDK11A-205ENST00000378633 MIR7-3HGQ8N6C7 128 aa13.09□□□□□ -0.31
CDK11A-205ENST00000378633 PF4P02776 101 aa13.08□□□□□ -0.31
CDK11A-205ENST00000378633 LINC00482Q8N8I6 264 aa13.08□□□□□ -0.31
CDK11A-205ENST00000378633 A0A087WZ39 114 aa13.08□□□□□ -0.32
CDK11A-205ENST00000378633 SNCGO76070 127 aa13.07□□□□□ -0.32
CDK11A-205ENST00000378633 SMR3AQ99954 134 aa13.07□□□□□ -0.32
CDK11A-205ENST00000378633 TRAV13-2A0A0B4J235 113 aa13.06□□□□□ -0.32
CDK11A-205ENST00000378633 FAM222AQ5U5X8 452 aa13.06□□□□□ -0.32
CDK11A-205ENST00000378633 J3QKU1 62 aa13.05□□□□□ -0.32
CDK11A-205ENST00000378633 TRACP01848 142 aa13.05□□□□□ -0.32
CDK11A-205ENST00000378633 C5orf38Q86SI9 138 aa13.05□□□□□ -0.32
CDK11A-205ENST00000378633 X6R8D5 127 aa13.05□□□□□ -0.32
CDK11A-205ENST00000378633 LINC00959A0A1B0GUT2 108 aa13.05□□□□□ -0.32
CDK11A-205ENST00000378633 FAM240AA0A1B0GVK7 77 aa13.05□□□□□ -0.32
CDK11A-205ENST00000378633 GYPEP15421 78 aa13.05□□□□□ -0.32
CDK11A-205ENST00000378633 LINC00158P58513 81 aa13.04□□□□□ -0.32
CDK11A-205ENST00000378633 SND1-IT1Q9HBX3 110 aa13.04□□□□□ -0.32
CDK11A-205ENST00000378633 IGKV2-28A0A075B6P5 120 aa13.04□□□□□ -0.32
CDK11A-205ENST00000378633 IGKV2D-28P01615 120 aa13.04□□□□□ -0.32
CDK11A-205ENST00000378633 CRPP02741 224 aa13.04□□□□□ -0.32
CDK11A-205ENST00000378633 LINC00337Q8N6G1 96 aa13.04□□□□□ -0.32
CDK11A-205ENST00000378633 C15orf53Q8NAA6 179 aa13.04□□□□□ -0.32
CDK11A-205ENST00000378633 RPL28P46779 137 aaKnown RBP13.03□□□□□ -0.32
CDK11A-205ENST00000378633 FAM218AQ96MZ4 157 aa13.03□□□□□ -0.32
CDK11A-205ENST00000378633 IBA57-AS1B1ANH7 110 aa13.03□□□□□ -0.32
CDK11A-205ENST00000378633 GAGE2BQ13066 116 aa13.03□□□□□ -0.32
CDK11A-205ENST00000378633 GAGE2EQ4V326 116 aa13.03□□□□□ -0.32
CDK11A-205ENST00000378633 GAGE2DQ9UEU5 116 aa13.03□□□□□ -0.32
CDK11A-205ENST00000378633 SMIM9A6NGZ8 99 aa13.01□□□□□ -0.33
CDK11A-205ENST00000378633 UNC79Q9P2D8 2635 aa13.01□□□□□ -0.33
CDK11A-205ENST00000378633 CCL18P55774 89 aa13.01□□□□□ -0.33
CDK11A-205ENST00000378633 A0A1B0GUV1 79 aa13□□□□□ -0.33
CDK11A-205ENST00000378633 MRPL23Q16540 153 aaKnown RBP13□□□□□ -0.33
CDK11A-205ENST00000378633 PRO0255Q9UI72 69 aa13□□□□□ -0.33
CDK11A-205ENST00000378633 HIVEP2P31629 2446 aa13□□□□□ -0.33
CDK11A-205ENST00000378633 Q6Q795 121 aa13□□□□□ -0.33
CDK11A-205ENST00000378633 BAALC-AS2P0C853 105 aa12.99□□□□□ -0.33
CDK11A-205ENST00000378633 ANAPC13Q9BS18 74 aa12.99□□□□□ -0.33
CDK11A-205ENST00000378633 FN1P02751 2386 aaKnown RBP12.98□□□□□ -0.33
CDK11A-205ENST00000378633 PFN2P35080 140 aa12.98□□□□□ -0.33
CDK11A-205ENST00000378633 XCL1P47992 114 aa12.98□□□□□ -0.33
CDK11A-205ENST00000378633 SS18Q15532 418 aa12.97□□□□□ -0.33
CDK11A-205ENST00000378633 TTC32Q5I0X7 151 aa12.97□□□□□ -0.33
CDK11A-205ENST00000378633 SPATA3Q8NHX4 192 aa12.97□□□□□ -0.33
CDK11A-205ENST00000378633 C22orf24Q9Y442 160 aa12.97□□□□□ -0.33
CDK11A-205ENST00000378633 C6orf226Q5I0X4 101 aa12.97□□□□□ -0.33
CDK11A-205ENST00000378633 SMIM11BQ8TCY0 68 aa12.97□□□□□ -0.33
CDK11A-205ENST00000378633 A0A096LPF7 62 aa12.96□□□□□ -0.33
CDK11A-205ENST00000378633 HELZ2Q9BYK8 2649 aaKnown RBP12.96□□□□□ -0.33
CDK11A-205ENST00000378633 TRAV26-1A0A087WT03 109 aa12.96□□□□□ -0.34
CDK11A-205ENST00000378633 LY6G6DO95868 133 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms