RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 FHL2Q14192 279 aa8.29□□□□□ -1.08
TNFRSF9-201ENST00000377507 HIST2H2BCQ6DN03 193 aa8.29□□□□□ -1.08
TNFRSF9-201ENST00000377507 SOSTDC1Q6X4U4 206 aa8.29□□□□□ -1.08
TNFRSF9-201ENST00000377507 LOC100131303A0A0U1RQF7 123 aa8.29□□□□□ -1.08
TNFRSF9-201ENST00000377507 SHISA2Q6UWI4 295 aa8.28□□□□□ -1.08
TNFRSF9-201ENST00000377507 PRIMA1Q86XR5 153 aa8.28□□□□□ -1.08
TNFRSF9-201ENST00000377507 TEX49A0A1B0GTD5 131 aa8.27□□□□□ -1.09
TNFRSF9-201ENST00000377507 C2orf82Q6UX34 121 aa8.27□□□□□ -1.09
TNFRSF9-201ENST00000377507 CLEC2BQ92478 149 aa8.27□□□□□ -1.09
TNFRSF9-201ENST00000377507 WNK1Q9H4A3 2382 aa8.27□□□□□ -1.09
TNFRSF9-201ENST00000377507 ANK3Q12955 4377 aaKnown RBP8.27□□□□□ -1.09
TNFRSF9-201ENST00000377507 TRBV6-8A0A0A6YYG3 113 aa8.27□□□□□ -1.09
TNFRSF9-201ENST00000377507 TRGV4A0A0C4DH28 118 aa8.27□□□□□ -1.09
TNFRSF9-201ENST00000377507 PDZD2O15018 2839 aa8.27□□□□□ -1.09
TNFRSF9-201ENST00000377507 FLNAP21333 2647 aaKnown RBP8.26□□□□□ -1.09
TNFRSF9-201ENST00000377507 PLA2G2AP14555 144 aa8.26□□□□□ -1.09
TNFRSF9-201ENST00000377507 DEFB121Q5J5C9 76 aa8.26□□□□□ -1.09
TNFRSF9-201ENST00000377507 LCE2DQ5TA82 110 aaPredicted RBP8.26□□□□□ -1.09
TNFRSF9-201ENST00000377507 LINC00612Q8N6U2 182 aa8.26□□□□□ -1.09
TNFRSF9-201ENST00000377507 NF1P21359 2839 aa8.25□□□□□ -1.09
TNFRSF9-201ENST00000377507 A0A1B0GV72 72 aa8.25□□□□□ -1.09
TNFRSF9-201ENST00000377507 COX7A2LO14548 114 aa8.25□□□□□ -1.09
TNFRSF9-201ENST00000377507 MEIG1Q5JSS6 88 aa8.25□□□□□ -1.09
TNFRSF9-201ENST00000377507 KIR2DL5BQ8NHK3 375 aa8.25□□□□□ -1.09
TNFRSF9-201ENST00000377507 UBE2WQ96B02 151 aa8.25□□□□□ -1.09
TNFRSF9-201ENST00000377507 IGHV3OR16-9A0A0B4J2B5 98 aa8.24□□□□□ -1.09
TNFRSF9-201ENST00000377507 A0A0U1RRA0 63 aa8.24□□□□□ -1.09
TNFRSF9-201ENST00000377507 CITED1Q99966 193 aa8.24□□□□□ -1.09
TNFRSF9-201ENST00000377507 IGLV4-60A0A075B6I1 120 aa8.23□□□□□ -1.09
TNFRSF9-201ENST00000377507 CKS1BP61024 79 aa8.23□□□□□ -1.09
TNFRSF9-201ENST00000377507 GAGE6Q13070 117 aa8.23□□□□□ -1.09
TNFRSF9-201ENST00000377507 COX7B2Q8TF08 81 aa8.23□□□□□ -1.09
TNFRSF9-201ENST00000377507 KRTAP10-3P60369 221 aa8.23□□□□□ -1.09
TNFRSF9-201ENST00000377507 SETXQ7Z333 2677 aaKnown RBP8.22□□□□□ -1.09
TNFRSF9-201ENST00000377507 CCDC168Q8NDH2 2452 aa8.22□□□□□ -1.09
TNFRSF9-201ENST00000377507 A0A087WZ39 114 aa8.22□□□□□ -1.09
TNFRSF9-201ENST00000377507 PF4P02776 101 aa8.22□□□□□ -1.09
TNFRSF9-201ENST00000377507 LINC00482Q8N8I6 264 aa8.22□□□□□ -1.09
TNFRSF9-201ENST00000377507 TRAV8-4A0A0B4J246 113 aa8.21□□□□□ -1.09
TNFRSF9-201ENST00000377507 FAM222AQ5U5X8 452 aa8.21□□□□□ -1.09
TNFRSF9-201ENST00000377507 FAM240AA0A1B0GVK7 77 aa8.21□□□□□ -1.1
TNFRSF9-201ENST00000377507 CHCHD5Q9BSY4 110 aa8.21□□□□□ -1.1
TNFRSF9-201ENST00000377507 NOTCH3Q9UM47 2321 aa8.2□□□□□ -1.1
TNFRSF9-201ENST00000377507 TRACP01848 142 aa8.2□□□□□ -1.1
TNFRSF9-201ENST00000377507 TRAV13-2A0A0B4J235 113 aa8.19□□□□□ -1.1
TNFRSF9-201ENST00000377507 A0A1B0GUV1 79 aa8.19□□□□□ -1.1
TNFRSF9-201ENST00000377507 SMIM9A6NGZ8 99 aa8.19□□□□□ -1.1
TNFRSF9-201ENST00000377507 RPL28P46779 137 aaKnown RBP8.19□□□□□ -1.1
TNFRSF9-201ENST00000377507 X6R8D5 127 aa8.19□□□□□ -1.1
TNFRSF9-201ENST00000377507 TENM4Q6N022 2769 aa8.19□□□□□ -1.1
TNFRSF9-201ENST00000377507 LINC00959A0A1B0GUT2 108 aa8.19□□□□□ -1.1
TNFRSF9-201ENST00000377507 IBA57-AS1B1ANH7 110 aa8.19□□□□□ -1.1
TNFRSF9-201ENST00000377507 J3QKU1 62 aa8.19□□□□□ -1.1
TNFRSF9-201ENST00000377507 CRLF1O75462 422 aa8.19□□□□□ -1.1
TNFRSF9-201ENST00000377507 MIR7-3HGQ8N6C7 128 aa8.19□□□□□ -1.1
TNFRSF9-201ENST00000377507 IGKV2-28A0A075B6P5 120 aa8.18□□□□□ -1.1
TNFRSF9-201ENST00000377507 IGKV2D-28P01615 120 aa8.18□□□□□ -1.1
TNFRSF9-201ENST00000377507 DEFB130BP0DP73 79 aa8.18□□□□□ -1.1
TNFRSF9-201ENST00000377507 DEFB130AP0DP74 79 aa8.18□□□□□ -1.1
TNFRSF9-201ENST00000377507 MRPL23Q16540 153 aaKnown RBP8.18□□□□□ -1.1
TNFRSF9-201ENST00000377507 Q6Q795 121 aa8.18□□□□□ -1.1
TNFRSF9-201ENST00000377507 JMJD1CQ15652 2540 aa8.18□□□□□ -1.1
TNFRSF9-201ENST00000377507 NIPBLQ6KC79 2804 aaeCLIP8.17□□□□□ -1.1
TNFRSF9-201ENST00000377507 ACANP16112 2415 aa8.17□□□□□ -1.1
TNFRSF9-201ENST00000377507 C2CD3Q4AC94 2353 aa8.17□□□□□ -1.1
TNFRSF9-201ENST00000377507 IGKV3OR2-268A0A0C4DH90 116 aa8.17□□□□□ -1.1
TNFRSF9-201ENST00000377507 SNCGO76070 127 aa8.17□□□□□ -1.1
TNFRSF9-201ENST00000377507 GYPEP15421 78 aa8.17□□□□□ -1.1
TNFRSF9-201ENST00000377507 LINC00337Q8N6G1 96 aa8.17□□□□□ -1.1
TNFRSF9-201ENST00000377507 SND1-IT1Q9HBX3 110 aa8.17□□□□□ -1.1
TNFRSF9-201ENST00000377507 TOMM7Q9P0U1 55 aa8.17□□□□□ -1.1
TNFRSF9-201ENST00000377507 FAM218AQ96MZ4 157 aa8.16□□□□□ -1.1
TNFRSF9-201ENST00000377507 SMR3AQ99954 134 aa8.16□□□□□ -1.1
TNFRSF9-201ENST00000377507 PRO0255Q9UI72 69 aa8.16□□□□□ -1.1
TNFRSF9-201ENST00000377507 CCL18P55774 89 aa8.15□□□□□ -1.1
TNFRSF9-201ENST00000377507 GAGE2BQ13066 116 aa8.15□□□□□ -1.1
TNFRSF9-201ENST00000377507 GAGE2EQ4V326 116 aa8.15□□□□□ -1.1
TNFRSF9-201ENST00000377507 LINC01561Q8N1V8 128 aa8.15□□□□□ -1.1
TNFRSF9-201ENST00000377507 GAGE2DQ9UEU5 116 aa8.15□□□□□ -1.1
TNFRSF9-201ENST00000377507 C22orf24Q9Y442 160 aa8.15□□□□□ -1.1
TNFRSF9-201ENST00000377507 CRPP02741 224 aa8.15□□□□□ -1.11
TNFRSF9-201ENST00000377507 LINC00158P58513 81 aa8.15□□□□□ -1.11
TNFRSF9-201ENST00000377507 C5orf38Q86SI9 138 aa8.15□□□□□ -1.11
TNFRSF9-201ENST00000377507 C15orf53Q8NAA6 179 aa8.15□□□□□ -1.11
TNFRSF9-201ENST00000377507 SETD2Q9BYW2 2564 aaPredicted RBP8.14□□□□□ -1.11
TNFRSF9-201ENST00000377507 MTORP42345 2549 aa8.13□□□□□ -1.11
TNFRSF9-201ENST00000377507 TRAV26-1A0A087WT03 109 aa8.13□□□□□ -1.11
TNFRSF9-201ENST00000377507 LYRM9A8MSI8 78 aa8.13□□□□□ -1.11
TNFRSF9-201ENST00000377507 ACYP1P07311 99 aa8.13□□□□□ -1.11
TNFRSF9-201ENST00000377507 BAALC-AS2P0C853 105 aa8.13□□□□□ -1.11
TNFRSF9-201ENST00000377507 SS18Q15532 418 aa8.13□□□□□ -1.11
TNFRSF9-201ENST00000377507 Q8IZM0 81 aa8.13□□□□□ -1.11
TNFRSF9-201ENST00000377507 LY6G6DO95868 133 aa8.12□□□□□ -1.11
TNFRSF9-201ENST00000377507 C9orf66Q5T8R8 295 aa8.12□□□□□ -1.11
TNFRSF9-201ENST00000377507 NHLRC4P0CG21 123 aaPredicted RBP8.11□□□□□ -1.11
TNFRSF9-201ENST00000377507 C6orf226Q5I0X4 101 aa8.11□□□□□ -1.11
TNFRSF9-201ENST00000377507 SMIM11BQ8TCY0 68 aa8.11□□□□□ -1.11
TNFRSF9-201ENST00000377507 ITPR2Q14571 2701 aa8.11□□□□□ -1.11
TNFRSF9-201ENST00000377507 H0YGX0 51 aa8.11□□□□□ -1.11
TNFRSF9-201ENST00000377507 XCL1P47992 114 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms