RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 IGHV3-38A0A0C4DH36 116 aa6.78□□□□□ -1.32
TRIM39-202ENST00000376659 NDUFA1O15239 70 aa6.78□□□□□ -1.32
TRIM39-202ENST00000376659 LGALS3P17931 250 aaKnown RBP6.78□□□□□ -1.32
TRIM39-202ENST00000376659 CHCHD5Q9BSY4 110 aa6.78□□□□□ -1.32
TRIM39-202ENST00000376659 IGHV3-64A0A075B6Q5 118 aa6.77□□□□□ -1.32
TRIM39-202ENST00000376659 TRBV10-1A0A0K0K1A3 114 aa6.77□□□□□ -1.32
TRIM39-202ENST00000376659 ZNF625Q96I27 306 aaPredicted RBP6.77□□□□□ -1.32
TRIM39-202ENST00000376659 PRO1854Q9UHT4 67 aa6.77□□□□□ -1.32
TRIM39-202ENST00000376659 UNC79Q9P2D8 2635 aa6.77□□□□□ -1.33
TRIM39-202ENST00000376659 HILS1P60008 231 aa6.77□□□□□ -1.33
TRIM39-202ENST00000376659 C9orf153Q5TBE3 101 aa6.77□□□□□ -1.33
TRIM39-202ENST00000376659 CDKN2A-AS1Q9UH64 79 aa6.77□□□□□ -1.33
TRIM39-202ENST00000376659 GCN1Q92616 2671 aaKnown RBP6.77□□□□□ -1.33
TRIM39-202ENST00000376659 SMIM1B2RUZ4 78 aa6.77□□□□□ -1.33
TRIM39-202ENST00000376659 HTN1P15515 57 aa6.76□□□□□ -1.33
TRIM39-202ENST00000376659 SPATA3Q8NHX4 192 aa6.76□□□□□ -1.33
TRIM39-202ENST00000376659 CDC42SE2Q9NRR3 84 aa6.76□□□□□ -1.33
TRIM39-202ENST00000376659 C1orf43Q9BWL3 253 aa6.76□□□□□ -1.33
TRIM39-202ENST00000376659 KLK5Q9Y337 293 aaPredicted RBP6.76□□□□□ -1.33
TRIM39-202ENST00000376659 TRBV30A0A0K0K1B3 111 aa6.75□□□□□ -1.33
TRIM39-202ENST00000376659 A0A1W2PRX2 142 aa6.75□□□□□ -1.33
TRIM39-202ENST00000376659 STHQ8IWL8 128 aa6.75□□□□□ -1.33
TRIM39-202ENST00000376659 MTORP42345 2549 aa6.75□□□□□ -1.33
TRIM39-202ENST00000376659 SEC61GP60059 68 aa6.75□□□□□ -1.33
TRIM39-202ENST00000376659 HERVK_113P63121 156 aa6.75□□□□□ -1.33
TRIM39-202ENST00000376659 HRCT1Q6UXD1 115 aa6.75□□□□□ -1.33
TRIM39-202ENST00000376659 SOSTDC1Q6X4U4 206 aa6.75□□□□□ -1.33
TRIM39-202ENST00000376659 DAZ4Q86SG3 579 aaKnown RBP6.75□□□□□ -1.33
TRIM39-202ENST00000376659 C15orf53Q8NAA6 179 aa6.75□□□□□ -1.33
TRIM39-202ENST00000376659 DAZ3Q9NR90 486 aaKnown RBP6.75□□□□□ -1.33
TRIM39-202ENST00000376659 TRIAP1O43715 76 aa6.74□□□□□ -1.33
TRIM39-202ENST00000376659 C16orf74Q96GX8 76 aa6.74□□□□□ -1.33
TRIM39-202ENST00000376659 C11orf44Q8N8P7 122 aa6.74□□□□□ -1.33
TRIM39-202ENST00000376659 KIR2DL5BQ8NHK3 375 aa6.74□□□□□ -1.33
TRIM39-202ENST00000376659 MRAPQ8TCY5 172 aa6.74□□□□□ -1.33
TRIM39-202ENST00000376659 FHL2Q14192 279 aa6.73□□□□□ -1.33
TRIM39-202ENST00000376659 NDUFA12Q9UI09 145 aa6.73□□□□□ -1.33
TRIM39-202ENST00000376659 LOC100131303A0A0U1RQF7 123 aa6.73□□□□□ -1.33
TRIM39-202ENST00000376659 SCGB1C2P0DMR2 95 aa6.73□□□□□ -1.33
TRIM39-202ENST00000376659 ANKRD29Q8N6D5 301 aa6.73□□□□□ -1.33
TRIM39-202ENST00000376659 LINC00482Q8N8I6 264 aa6.73□□□□□ -1.33
TRIM39-202ENST00000376659 KHDC1LQ5JSQ8 128 aa6.73□□□□□ -1.33
TRIM39-202ENST00000376659 TRGV1A0A0A0MS02 117 aa6.72□□□□□ -1.33
TRIM39-202ENST00000376659 TRBV6-4A0A1B0GX49 114 aa6.72□□□□□ -1.33
TRIM39-202ENST00000376659 C4orf26Q17RF5 130 aa6.72□□□□□ -1.33
TRIM39-202ENST00000376659 H7C423 109 aa6.72□□□□□ -1.33
TRIM39-202ENST00000376659 Q6Q795 121 aa6.72□□□□□ -1.33
TRIM39-202ENST00000376659 NOP10Q9NPE3 64 aaKnown RBP6.72□□□□□ -1.33
TRIM39-202ENST00000376659 PKIGQ9Y2B9 76 aa6.72□□□□□ -1.33
TRIM39-202ENST00000376659 C22orf24Q9Y442 160 aa6.72□□□□□ -1.33
TRIM39-202ENST00000376659 JMJD1CQ15652 2540 aa6.71□□□□□ -1.33
TRIM39-202ENST00000376659 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.71□□□□□ -1.34
TRIM39-202ENST00000376659 X6R8D5 127 aa6.71□□□□□ -1.34
TRIM39-202ENST00000376659 LYSTQ99698 3801 aa6.7□□□□□ -1.34
TRIM39-202ENST00000376659 DYNC2H1Q8NCM8 4307 aaKnown RBP6.7□□□□□ -1.34
TRIM39-202ENST00000376659 SMR3AQ99954 134 aa6.7□□□□□ -1.34
TRIM39-202ENST00000376659 RPL13AP40429 203 aaKnown RBP6.7□□□□□ -1.34
TRIM39-202ENST00000376659 NSD1Q96L73 2696 aaPredicted RBP6.7□□□□□ -1.34
TRIM39-202ENST00000376659 ACANP16112 2415 aa6.7□□□□□ -1.34
TRIM39-202ENST00000376659 FAM236AA0A1B0GUQ0 79 aa6.7□□□□□ -1.34
TRIM39-202ENST00000376659 FAM236BA0A1B0GV22 79 aa6.7□□□□□ -1.34
TRIM39-202ENST00000376659 CMC4P56277 68 aaPredicted RBP6.7□□□□□ -1.34
TRIM39-202ENST00000376659 ICOSQ9Y6W8 199 aa6.7□□□□□ -1.34
TRIM39-202ENST00000376659 HIVEP2P31629 2446 aa6.69□□□□□ -1.34
TRIM39-202ENST00000376659 DEFB121Q5J5C9 76 aa6.69□□□□□ -1.34
TRIM39-202ENST00000376659 LINC00308Q8TCZ7 52 aa6.69□□□□□ -1.34
TRIM39-202ENST00000376659 J3QKU1 62 aa6.69□□□□□ -1.34
TRIM39-202ENST00000376659 TRAV8-4A0A0B4J246 113 aa6.68□□□□□ -1.34
TRIM39-202ENST00000376659 GAGE2AQ6NT46 116 aa6.68□□□□□ -1.34
TRIM39-202ENST00000376659 RPL36AP83881 106 aaKnown RBP6.68□□□□□ -1.34
TRIM39-202ENST00000376659 LYRM7Q5U5X0 104 aa6.68□□□□□ -1.34
TRIM39-202ENST00000376659 RPL36ALQ969Q0 106 aaKnown RBP6.68□□□□□ -1.34
TRIM39-202ENST00000376659 IGLV4-60A0A075B6I1 120 aa6.68□□□□□ -1.34
TRIM39-202ENST00000376659 A0A1B0GX51 115 aa6.68□□□□□ -1.34
TRIM39-202ENST00000376659 RPL35AP18077 110 aaKnown RBP6.68□□□□□ -1.34
TRIM39-202ENST00000376659 HIVEP1P15822 2718 aa6.67□□□□□ -1.34
TRIM39-202ENST00000376659 FN1P02751 2386 aaKnown RBP6.67□□□□□ -1.34
TRIM39-202ENST00000376659 DAND5Q8N907 189 aa6.67□□□□□ -1.34
TRIM39-202ENST00000376659 IGHV3OR16-9A0A0B4J2B5 98 aa6.67□□□□□ -1.34
TRIM39-202ENST00000376659 LST1O00453 97 aa6.67□□□□□ -1.34
TRIM39-202ENST00000376659 HELZ2Q9BYK8 2649 aaKnown RBP6.67□□□□□ -1.34
TRIM39-202ENST00000376659 LINC01620Q4KN68 170 aa6.67□□□□□ -1.34
TRIM39-202ENST00000376659 C3orf22Q8N5N4 141 aa6.67□□□□□ -1.34
TRIM39-202ENST00000376659 NTN5Q8WTR8 489 aaPredicted RBP6.67□□□□□ -1.34
TRIM39-202ENST00000376659 SLC25A20O43772 301 aa6.66□□□□□ -1.34
TRIM39-202ENST00000376659 TRBV6-8A0A0A6YYG3 113 aa6.66□□□□□ -1.34
TRIM39-202ENST00000376659 Q9H8V8 135 aa6.66□□□□□ -1.34
TRIM39-202ENST00000376659 IGKV2-28A0A075B6P5 120 aa6.66□□□□□ -1.34
TRIM39-202ENST00000376659 IGKV2D-28P01615 120 aa6.66□□□□□ -1.34
TRIM39-202ENST00000376659 TRBV10-2A0A0K0K1G8 114 aa6.65□□□□□ -1.34
TRIM39-202ENST00000376659 RPS28P62857 69 aaKnown RBP6.65□□□□□ -1.34
TRIM39-202ENST00000376659 V9GYY9 64 aa6.65□□□□□ -1.35
TRIM39-202ENST00000376659 ATXN8Q156A1 80 aa6.64□□□□□ -1.35
TRIM39-202ENST00000376659 TMEM243Q9BU79 118 aa6.64□□□□□ -1.35
TRIM39-202ENST00000376659 CSMD3Q7Z407 3707 aa6.64□□□□□ -1.35
TRIM39-202ENST00000376659 UQCRQO14949 82 aa6.64□□□□□ -1.35
TRIM39-202ENST00000376659 HUWE1Q7Z6Z7 4374 aaKnown RBP6.64□□□□□ -1.35
TRIM39-202ENST00000376659 LY6G6DO95868 133 aa6.64□□□□□ -1.35
TRIM39-202ENST00000376659 A0A087WZ39 114 aa6.63□□□□□ -1.35
TRIM39-202ENST00000376659 NPC2P61916 151 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms