RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 PRM2P04554 102 aa6.14□□□□□ -1.43
SNRNP40-202ENST00000373720 TSPEAR-AS2P59090 65 aa6.14□□□□□ -1.43
SNRNP40-202ENST00000373720 SS18Q15532 418 aa6.14□□□□□ -1.43
SNRNP40-202ENST00000373720 MRPL23Q16540 153 aaKnown RBP6.14□□□□□ -1.43
SNRNP40-202ENST00000373720 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.14□□□□□ -1.43
SNRNP40-202ENST00000373720 A0A087WZ39 114 aa6.13□□□□□ -1.43
SNRNP40-202ENST00000373720 A4D1N5 150 aa6.13□□□□□ -1.43
SNRNP40-202ENST00000373720 CYSRT1A8MQ03 144 aa6.13□□□□□ -1.43
SNRNP40-202ENST00000373720 SMIM1B2RUZ4 78 aa6.13□□□□□ -1.43
SNRNP40-202ENST00000373720 H3BMG7 143 aa6.13□□□□□ -1.43
SNRNP40-202ENST00000373720 CXCL5P42830 114 aa6.13□□□□□ -1.43
SNRNP40-202ENST00000373720 DAD1P61803 113 aa6.13□□□□□ -1.43
SNRNP40-202ENST00000373720 CEMP1Q6PRD7 247 aaPredicted RBP6.13□□□□□ -1.43
SNRNP40-202ENST00000373720 MUSTN1Q8IVN3 82 aa6.13□□□□□ -1.43
SNRNP40-202ENST00000373720 LITAFQ99732 161 aa6.13□□□□□ -1.43
SNRNP40-202ENST00000373720 CHCHD5Q9BSY4 110 aa6.13□□□□□ -1.43
SNRNP40-202ENST00000373720 MAST4O15021 2626 aa6.12□□□□□ -1.43
SNRNP40-202ENST00000373720 IBA57-AS1B1ANH7 110 aa6.12□□□□□ -1.43
SNRNP40-202ENST00000373720 TSPAN13O95857 204 aa6.12□□□□□ -1.43
SNRNP40-202ENST00000373720 IGHV3-33P01772 117 aa6.12□□□□□ -1.43
SNRNP40-202ENST00000373720 PRSS2P07478 247 aa6.12□□□□□ -1.43
SNRNP40-202ENST00000373720 DEFB130BP0DP73 79 aa6.12□□□□□ -1.43
SNRNP40-202ENST00000373720 DEFB130AP0DP74 79 aa6.12□□□□□ -1.43
SNRNP40-202ENST00000373720 GYPEP15421 78 aa6.12□□□□□ -1.43
SNRNP40-202ENST00000373720 EGFEM1PQ0D2K5 195 aa6.12□□□□□ -1.43
SNRNP40-202ENST00000373720 MEIG1Q5JSS6 88 aa6.12□□□□□ -1.43
SNRNP40-202ENST00000373720 FAM222AQ5U5X8 452 aa6.12□□□□□ -1.43
SNRNP40-202ENST00000373720 WFDC10AQ9H1F0 79 aa6.12□□□□□ -1.43
SNRNP40-202ENST00000373720 Q9UF83 564 aa6.12□□□□□ -1.43
SNRNP40-202ENST00000373720 ACANP16112 2415 aa6.11□□□□□ -1.43
SNRNP40-202ENST00000373720 ZNF469Q96JG9 3925 aaPredicted RBP6.11□□□□□ -1.43
SNRNP40-202ENST00000373720 TRAV13-1A0A0B4J241 112 aa6.11□□□□□ -1.43
SNRNP40-202ENST00000373720 IGHV3OR16-9A0A0B4J2B5 98 aa6.11□□□□□ -1.43
SNRNP40-202ENST00000373720 F5H768 121 aa6.11□□□□□ -1.43
SNRNP40-202ENST00000373720 APOMO95445 188 aa6.11□□□□□ -1.43
SNRNP40-202ENST00000373720 SPINK8P0C7L1 97 aa6.11□□□□□ -1.43
SNRNP40-202ENST00000373720 SCGB1C2P0DMR2 95 aa6.11□□□□□ -1.43
SNRNP40-202ENST00000373720 COX17Q14061 63 aa6.11□□□□□ -1.43
SNRNP40-202ENST00000373720 ATXN8Q156A1 80 aa6.11□□□□□ -1.43
SNRNP40-202ENST00000373720 PRIMA1Q86XR5 153 aa6.11□□□□□ -1.43
SNRNP40-202ENST00000373720 ZNF625Q96I27 306 aaPredicted RBP6.11□□□□□ -1.43
SNRNP40-202ENST00000373720 MTORP42345 2549 aa6.11□□□□□ -1.43
SNRNP40-202ENST00000373720 TRAV8-3A0A0A6YYJ7 113 aa6.1□□□□□ -1.43
SNRNP40-202ENST00000373720 TRAV13-2A0A0B4J235 113 aa6.1□□□□□ -1.43
SNRNP40-202ENST00000373720 LOC107984156A0A0G2JMH3 177 aa6.1□□□□□ -1.43
SNRNP40-202ENST00000373720 G3V4G9 280 aa6.1□□□□□ -1.43
SNRNP40-202ENST00000373720 K7ERJ3 54 aa6.1□□□□□ -1.43
SNRNP40-202ENST00000373720 LELP1Q5T871 98 aa6.1□□□□□ -1.43
SNRNP40-202ENST00000373720 ARL17AQ8IVW1 177 aa6.1□□□□□ -1.43
SNRNP40-202ENST00000373720 Q8IZM0 81 aa6.1□□□□□ -1.43
SNRNP40-202ENST00000373720 Q8NAQ8 132 aa6.1□□□□□ -1.43
SNRNP40-202ENST00000373720 COX7B2Q8TF08 81 aa6.1□□□□□ -1.43
SNRNP40-202ENST00000373720 KRTAP4-9Q9BYQ8 210 aa6.1□□□□□ -1.43
SNRNP40-202ENST00000373720 C11orf68Q9H3H3 251 aaKnown RBP6.1□□□□□ -1.43
SNRNP40-202ENST00000373720 Q9H8V8 135 aa6.1□□□□□ -1.43
SNRNP40-202ENST00000373720 ICOSQ9Y6W8 199 aa6.1□□□□□ -1.43
SNRNP40-202ENST00000373720 NF1P21359 2839 aa6.1□□□□□ -1.43
SNRNP40-202ENST00000373720 NSD1Q96L73 2696 aaPredicted RBP6.09□□□□□ -1.43
SNRNP40-202ENST00000373720 IGHV4-28A0A0C4DH34 117 aa6.09□□□□□ -1.43
SNRNP40-202ENST00000373720 LINC00959A0A1B0GUT2 108 aa6.09□□□□□ -1.43
SNRNP40-202ENST00000373720 IGHV4-30-4P0DP06 118 aa6.09□□□□□ -1.43
SNRNP40-202ENST00000373720 PSMB2P49721 201 aa6.09□□□□□ -1.43
SNRNP40-202ENST00000373720 C3orf56Q8N813 242 aa6.09□□□□□ -1.43
SNRNP40-202ENST00000373720 TRAV8-4A0A0B4J246 113 aa6.08□□□□□ -1.44
SNRNP40-202ENST00000373720 F8WDY8 70 aa6.08□□□□□ -1.44
SNRNP40-202ENST00000373720 COX6A2Q02221 97 aa6.08□□□□□ -1.44
SNRNP40-202ENST00000373720 DEFB135Q30KP9 77 aa6.08□□□□□ -1.44
SNRNP40-202ENST00000373720 CD164L2Q6UWJ8 174 aa6.08□□□□□ -1.44
SNRNP40-202ENST00000373720 LINC00308Q8TCZ7 52 aa6.08□□□□□ -1.44
SNRNP40-202ENST00000373720 DEFB104AQ8WTQ1 72 aa6.08□□□□□ -1.44
SNRNP40-202ENST00000373720 CARD19Q96LW7 228 aa6.08□□□□□ -1.44
SNRNP40-202ENST00000373720 NBPF19A0A087WUL8 3843 aa6.08□□□□□ -1.44
SNRNP40-202ENST00000373720 OTOGQ6ZRI0 2925 aa6.08□□□□□ -1.44
SNRNP40-202ENST00000373720 ANK3Q12955 4377 aaKnown RBP6.07□□□□□ -1.44
SNRNP40-202ENST00000373720 WNK1Q9H4A3 2382 aa6.07□□□□□ -1.44
SNRNP40-202ENST00000373720 IGHV3-64A0A075B6Q5 118 aa6.07□□□□□ -1.44
SNRNP40-202ENST00000373720 TMEM262E9PQX1 116 aa6.07□□□□□ -1.44
SNRNP40-202ENST00000373720 RBX1P62877 108 aa6.07□□□□□ -1.44
SNRNP40-202ENST00000373720 GAGE6Q13070 117 aa6.07□□□□□ -1.44
SNRNP40-202ENST00000373720 Q1RN00 199 aa6.07□□□□□ -1.44
SNRNP40-202ENST00000373720 RNASE13Q5GAN3 156 aaKnown RBP6.07□□□□□ -1.44
SNRNP40-202ENST00000373720 HIST2H2BDQ6DRA6 164 aa6.07□□□□□ -1.44
SNRNP40-202ENST00000373720 H3BT86 120 aa6.06□□□□□ -1.44
SNRNP40-202ENST00000373720 C6orf226Q5I0X4 101 aa6.06□□□□□ -1.44
SNRNP40-202ENST00000373720 TEN1Q86WV5 123 aa6.06□□□□□ -1.44
SNRNP40-202ENST00000373720 PRO0461Q9UI25 63 aa6.06□□□□□ -1.44
SNRNP40-202ENST00000373720 C2CD3Q4AC94 2353 aa6.06□□□□□ -1.44
SNRNP40-202ENST00000373720 AKAP9Q99996 3911 aa6.06□□□□□ -1.44
SNRNP40-202ENST00000373720 H0YGX0 51 aa6.05□□□□□ -1.44
SNRNP40-202ENST00000373720 ADAMTSL4-AS1Q5T5F5 129 aa6.05□□□□□ -1.44
SNRNP40-202ENST00000373720 PPDPFLQ8WWR9 84 aa6.05□□□□□ -1.44
SNRNP40-202ENST00000373720 VPS25Q9BRG1 176 aa6.05□□□□□ -1.44
SNRNP40-202ENST00000373720 HECTD1Q9ULT8 2610 aa6.04□□□□□ -1.44
SNRNP40-202ENST00000373720 IGLV4-60A0A075B6I1 120 aa6.04□□□□□ -1.44
SNRNP40-202ENST00000373720 TRBV10-2A0A0K0K1G8 114 aa6.04□□□□□ -1.44
SNRNP40-202ENST00000373720 LOC100131303A0A0U1RQF7 123 aa6.04□□□□□ -1.44
SNRNP40-202ENST00000373720 COX7A2LO14548 114 aa6.04□□□□□ -1.44
SNRNP40-202ENST00000373720 SNCGO76070 127 aa6.04□□□□□ -1.44
SNRNP40-202ENST00000373720 NDUFC2O95298 119 aa6.04□□□□□ -1.44
SNRNP40-202ENST00000373720 PRR34Q9NV39 138 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms