RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 CFAP161Q6P656 301 aa9.47□□□□□ -0.89
NCDN-203ENST00000373253 LINC00526Q96FQ7 95 aa9.47□□□□□ -0.89
NCDN-203ENST00000373253 UBE2D4Q9Y2X8 147 aa9.47□□□□□ -0.89
NCDN-203ENST00000373253 MALP21145 153 aa9.47□□□□□ -0.89
NCDN-203ENST00000373253 Q8N2B8 174 aa9.47□□□□□ -0.89
NCDN-203ENST00000373253 VSIG2Q96IQ7 327 aa9.47□□□□□ -0.89
NCDN-203ENST00000373253 SPANXA1Q9NS26 97 aa9.47□□□□□ -0.89
NCDN-203ENST00000373253 NDUFA11Q86Y39 141 aa9.46□□□□□ -0.89
NCDN-203ENST00000373253 C10orf126Q8N4M7 172 aa9.46□□□□□ -0.89
NCDN-203ENST00000373253 RNF152Q8N8N0 203 aa9.46□□□□□ -0.89
NCDN-203ENST00000373253 PDZD2O15018 2839 aa9.46□□□□□ -0.89
NCDN-203ENST00000373253 IGLV1-51P01701 117 aa9.46□□□□□ -0.89
NCDN-203ENST00000373253 RPL13AP40429 203 aaKnown RBP9.46□□□□□ -0.89
NCDN-203ENST00000373253 CHCHD7Q9BUK0 85 aa9.46□□□□□ -0.89
NCDN-203ENST00000373253 CFC1BP0CG36 223 aa9.46□□□□□ -0.9
NCDN-203ENST00000373253 CFC1P0CG37 223 aa9.46□□□□□ -0.9
NCDN-203ENST00000373253 TAL2Q16559 108 aa9.46□□□□□ -0.9
NCDN-203ENST00000373253 CMC4P56277 68 aaPredicted RBP9.45□□□□□ -0.9
NCDN-203ENST00000373253 PPDPFLQ8WWR9 84 aa9.45□□□□□ -0.9
NCDN-203ENST00000373253 IGHV1-58A0A0C4DH39 117 aa9.45□□□□□ -0.9
NCDN-203ENST00000373253 RS1O15537 224 aa9.45□□□□□ -0.9
NCDN-203ENST00000373253 ATP6V0E2Q8NHE4 81 aa9.45□□□□□ -0.9
NCDN-203ENST00000373253 CLEC2BQ92478 149 aa9.45□□□□□ -0.9
NCDN-203ENST00000373253 PIK3CD-AS1Q5SR53 167 aa9.45□□□□□ -0.9
NCDN-203ENST00000373253 CDIP1Q9H305 208 aa9.44□□□□□ -0.9
NCDN-203ENST00000373253 TRAV4A0A0B4J268 109 aa9.44□□□□□ -0.9
NCDN-203ENST00000373253 ADAMTSL4-AS1Q5T5F5 129 aa9.44□□□□□ -0.9
NCDN-203ENST00000373253 TCL1BO95988 128 aa9.43□□□□□ -0.9
NCDN-203ENST00000373253 HERVK_113P63121 156 aa9.43□□□□□ -0.9
NCDN-203ENST00000373253 KRTAP1-1Q07627 177 aa9.43□□□□□ -0.9
NCDN-203ENST00000373253 ANKRD29Q8N6D5 301 aa9.43□□□□□ -0.9
NCDN-203ENST00000373253 DAZ2Q13117 558 aaKnown RBP9.43□□□□□ -0.9
NCDN-203ENST00000373253 DAZ4Q86SG3 579 aaKnown RBP9.43□□□□□ -0.9
NCDN-203ENST00000373253 DAZ3Q9NR90 486 aaKnown RBP9.43□□□□□ -0.9
NCDN-203ENST00000373253 IGLV4-60A0A075B6I1 120 aa9.42□□□□□ -0.9
NCDN-203ENST00000373253 CCDC179H3BU77 68 aa9.42□□□□□ -0.9
NCDN-203ENST00000373253 IGHV3-30P01768 117 aa9.42□□□□□ -0.9
NCDN-203ENST00000373253 IGHV3-33P01772 117 aa9.42□□□□□ -0.9
NCDN-203ENST00000373253 IGHV3-30-5P0DP03 117 aa9.42□□□□□ -0.9
NCDN-203ENST00000373253 FHL3Q13643 280 aa9.42□□□□□ -0.9
NCDN-203ENST00000373253 RETNQ9HD89 108 aa9.42□□□□□ -0.9
NCDN-203ENST00000373253 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.42□□□□□ -0.9
NCDN-203ENST00000373253 NTM-AS1Q6ZSK4 140 aa9.42□□□□□ -0.9
NCDN-203ENST00000373253 DNAJC30Q96LL9 226 aa9.42□□□□□ -0.9
NCDN-203ENST00000373253 C9orf66Q5T8R8 295 aa9.41□□□□□ -0.9
NCDN-203ENST00000373253 LINC01546A6NGU7 62 aa9.41□□□□□ -0.9
NCDN-203ENST00000373253 NTN5Q8WTR8 489 aaPredicted RBP9.41□□□□□ -0.9
NCDN-203ENST00000373253 KRTAP10-3P60369 221 aa9.41□□□□□ -0.9
NCDN-203ENST00000373253 C2orf82Q6UX34 121 aa9.41□□□□□ -0.9
NCDN-203ENST00000373253 SMCPP49901 116 aaPredicted RBP9.4□□□□□ -0.9
NCDN-203ENST00000373253 LINC00242Q5T6M2 205 aa9.4□□□□□ -0.9
NCDN-203ENST00000373253 TEN1Q86WV5 123 aa9.4□□□□□ -0.9
NCDN-203ENST00000373253 Q8N3U1 123 aa9.4□□□□□ -0.91
NCDN-203ENST00000373253 SLC25A20O43772 301 aa9.39□□□□□ -0.91
NCDN-203ENST00000373253 LINC00269Q8N2A0 174 aa9.39□□□□□ -0.91
NCDN-203ENST00000373253 PRO0461Q9UI25 63 aa9.39□□□□□ -0.91
NCDN-203ENST00000373253 RPL32P62910 135 aaKnown RBP9.38□□□□□ -0.91
NCDN-203ENST00000373253 MIR7-3HGQ8N6C7 128 aa9.38□□□□□ -0.91
NCDN-203ENST00000373253 UBE2WQ96B02 151 aa9.38□□□□□ -0.91
NCDN-203ENST00000373253 SS18Q15532 418 aa9.38□□□□□ -0.91
NCDN-203ENST00000373253 CARD19Q96LW7 228 aa9.38□□□□□ -0.91
NCDN-203ENST00000373253 KLK12Q9UKR0 248 aa9.38□□□□□ -0.91
NCDN-203ENST00000373253 TINCRA0A1B0GVN0 87 aa9.38□□□□□ -0.91
NCDN-203ENST00000373253 UBE2D1P51668 147 aa9.37□□□□□ -0.91
NCDN-203ENST00000373253 IGHV4-28A0A0C4DH34 117 aa9.37□□□□□ -0.91
NCDN-203ENST00000373253 TRBV10-1A0A0K0K1A3 114 aa9.37□□□□□ -0.91
NCDN-203ENST00000373253 UBE2D3P61077 147 aa9.37□□□□□ -0.91
NCDN-203ENST00000373253 UBE2D2P62837 147 aa9.37□□□□□ -0.91
NCDN-203ENST00000373253 MRPS36P82909 103 aaKnown RBP9.37□□□□□ -0.91
NCDN-203ENST00000373253 TRBV6-8A0A0A6YYG3 113 aa9.37□□□□□ -0.91
NCDN-203ENST00000373253 EIF4EBP3O60516 100 aaPredicted RBP9.37□□□□□ -0.91
NCDN-203ENST00000373253 IFITM1P13164 125 aa9.37□□□□□ -0.91
NCDN-203ENST00000373253 APOC4P55056 127 aa9.37□□□□□ -0.91
NCDN-203ENST00000373253 CITED1Q99966 193 aa9.37□□□□□ -0.91
NCDN-203ENST00000373253 TRAV8-4A0A0B4J246 113 aa9.36□□□□□ -0.91
NCDN-203ENST00000373253 DNAL4O96015 105 aa9.36□□□□□ -0.91
NCDN-203ENST00000373253 CRPP02741 224 aa9.36□□□□□ -0.91
NCDN-203ENST00000373253 GIG44P09565 113 aaPredicted RBP9.36□□□□□ -0.91
NCDN-203ENST00000373253 C15orf53Q8NAA6 179 aa9.36□□□□□ -0.91
NCDN-203ENST00000373253 Q9HAA7 133 aa9.36□□□□□ -0.91
NCDN-203ENST00000373253 PRO0255Q9UI72 69 aa9.36□□□□□ -0.91
NCDN-203ENST00000373253 PYGO1Q9Y3Y4 419 aa9.36□□□□□ -0.91
NCDN-203ENST00000373253 BEAN1Q3B7T3 259 aa9.35□□□□□ -0.91
NCDN-203ENST00000373253 CDC42SE2Q9NRR3 84 aa9.35□□□□□ -0.91
NCDN-203ENST00000373253 KMT2BQ9UMN6 2715 aaPredicted RBP9.35□□□□□ -0.91
NCDN-203ENST00000373253 NDUFV3P56181 108 aaKnown RBP9.35□□□□□ -0.91
NCDN-203ENST00000373253 FHL2Q14192 279 aa9.35□□□□□ -0.91
NCDN-203ENST00000373253 ATXN8Q156A1 80 aa9.35□□□□□ -0.91
NCDN-203ENST00000373253 TRIAP1O43715 76 aa9.34□□□□□ -0.91
NCDN-203ENST00000373253 COX7B2Q8TF08 81 aa9.34□□□□□ -0.91
NCDN-203ENST00000373253 AMELXQ99217 191 aa9.34□□□□□ -0.91
NCDN-203ENST00000373253 ATP5G1P05496 136 aa9.34□□□□□ -0.91
NCDN-203ENST00000373253 IGHV4-30-4P0DP06 118 aa9.34□□□□□ -0.91
NCDN-203ENST00000373253 ICOSQ9Y6W8 199 aa9.34□□□□□ -0.91
NCDN-203ENST00000373253 SND1-IT1Q9HBX3 110 aa9.33□□□□□ -0.92
NCDN-203ENST00000373253 MRPL23Q16540 153 aaKnown RBP9.33□□□□□ -0.92
NCDN-203ENST00000373253 SPART-AS1P0CW21 52 aa9.32□□□□□ -0.92
NCDN-203ENST00000373253 MIAQ16674 131 aa9.32□□□□□ -0.92
NCDN-203ENST00000373253 C16orf95Q9H693 158 aa9.32□□□□□ -0.92
NCDN-203ENST00000373253 TEX49A0A1B0GTD5 131 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 444.5 ms