RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 IGLV5-39A0A0G2JS06 123 aa12.34□□□□□ -0.43
CD40-202ENST00000372285 CCL25O15444 150 aa12.34□□□□□ -0.43
CD40-202ENST00000372285 Q8N3U1 123 aa12.34□□□□□ -0.43
CD40-202ENST00000372285 STAB2Q8WWQ8 2551 aa12.33□□□□□ -0.44
CD40-202ENST00000372285 SMIM1B2RUZ4 78 aa12.33□□□□□ -0.44
CD40-202ENST00000372285 ESRGQ1W209 222 aa12.33□□□□□ -0.44
CD40-202ENST00000372285 C15orf53Q8NAA6 179 aa12.33□□□□□ -0.44
CD40-202ENST00000372285 ANGP03950 147 aaKnown RBP12.32□□□□□ -0.44
CD40-202ENST00000372285 SS18Q15532 418 aa12.32□□□□□ -0.44
CD40-202ENST00000372285 LINC00269Q8N2A0 174 aa12.32□□□□□ -0.44
CD40-202ENST00000372285 IGHV3OR16-9A0A0B4J2B5 98 aa12.31□□□□□ -0.44
CD40-202ENST00000372285 NHLRC4P0CG21 123 aaPredicted RBP12.31□□□□□ -0.44
CD40-202ENST00000372285 TAL2Q16559 108 aa12.31□□□□□ -0.44
CD40-202ENST00000372285 SCGB1D4Q6XE38 83 aa12.31□□□□□ -0.44
CD40-202ENST00000372285 DNAH9Q9NYC9 4486 aa12.31□□□□□ -0.44
CD40-202ENST00000372285 COL5A1-AS1Q5SY13 56 aa12.31□□□□□ -0.44
CD40-202ENST00000372285 ZFAND6Q6FIF0 208 aa12.3□□□□□ -0.44
CD40-202ENST00000372285 REG3AQ06141 175 aa12.29□□□□□ -0.44
CD40-202ENST00000372285 CLPSL2Q6UWE3 100 aa12.29□□□□□ -0.44
CD40-202ENST00000372285 A0A087WZ39 114 aa12.28□□□□□ -0.44
CD40-202ENST00000372285 ORAOV1Q8WV07 137 aa12.28□□□□□ -0.44
CD40-202ENST00000372285 NDUFA12Q9UI09 145 aa12.28□□□□□ -0.44
CD40-202ENST00000372285 WFDC10BQ8IUB3 73 aa12.28□□□□□ -0.44
CD40-202ENST00000372285 PRR34Q9NV39 138 aa12.28□□□□□ -0.44
CD40-202ENST00000372285 C10orf126Q8N4M7 172 aa12.27□□□□□ -0.45
CD40-202ENST00000372285 HIST1H4GQ99525 98 aa12.27□□□□□ -0.45
CD40-202ENST00000372285 TM2D2Q9BX73 214 aa12.27□□□□□ -0.45
CD40-202ENST00000372285 CEND1Q8N111 149 aa12.26□□□□□ -0.45
CD40-202ENST00000372285 SPANXB1Q9NS25 103 aaPredicted RBP12.26□□□□□ -0.45
CD40-202ENST00000372285 MEGF8Q7Z7M0 2845 aa12.26□□□□□ -0.45
CD40-202ENST00000372285 A0A0J9YXY3 114 aa12.25□□□□□ -0.45
CD40-202ENST00000372285 NDUFA1O15239 70 aa12.25□□□□□ -0.45
CD40-202ENST00000372285 XCL1P47992 114 aa12.25□□□□□ -0.45
CD40-202ENST00000372285 LINC01561Q8N1V8 128 aa12.25□□□□□ -0.45
CD40-202ENST00000372285 KLK12Q9UKR0 248 aa12.25□□□□□ -0.45
CD40-202ENST00000372285 IGHV3-30P01768 117 aa12.25□□□□□ -0.45
CD40-202ENST00000372285 IGHV3-33P01772 117 aa12.25□□□□□ -0.45
CD40-202ENST00000372285 IGHV3-30-5P0DP03 117 aa12.25□□□□□ -0.45
CD40-202ENST00000372285 GCSHP23434 173 aa12.25□□□□□ -0.45
CD40-202ENST00000372285 DNHD1Q96M86 4753 aa12.25□□□□□ -0.45
CD40-202ENST00000372285 CD164L2Q6UWJ8 174 aa12.24□□□□□ -0.45
CD40-202ENST00000372285 C5orf38Q86SI9 138 aa12.24□□□□□ -0.45
CD40-202ENST00000372285 CHCHD10Q8WYQ3 142 aaPredicted RBP12.24□□□□□ -0.45
CD40-202ENST00000372285 IGLL5B9A064 214 aa12.23□□□□□ -0.45
CD40-202ENST00000372285 ENHOQ6UWT2 76 aa12.23□□□□□ -0.45
CD40-202ENST00000372285 FXYD2P54710 66 aa12.23□□□□□ -0.45
CD40-202ENST00000372285 A6NDN8 102 aa12.22□□□□□ -0.45
CD40-202ENST00000372285 SRSF9Q13242 221 aaKnown RBP eCLIP12.22□□□□□ -0.45
CD40-202ENST00000372285 LINC01556Q5JQF7 62 aa12.22□□□□□ -0.45
CD40-202ENST00000372285 COX7B2Q8TF08 81 aa12.22□□□□□ -0.45
CD40-202ENST00000372285 ZNF625Q96I27 306 aaPredicted RBP12.22□□□□□ -0.45
CD40-202ENST00000372285 Q9H8V8 135 aa12.21□□□□□ -0.45
CD40-202ENST00000372285 IGLV10-54A0A075B6I4 117 aa12.2□□□□□ -0.46
CD40-202ENST00000372285 TMEM238C9JI98 176 aa12.2□□□□□ -0.46
CD40-202ENST00000372285 LITAFQ99732 161 aa12.2□□□□□ -0.46
CD40-202ENST00000372285 LINC00588Q9Y4M8 146 aa12.2□□□□□ -0.46
CD40-202ENST00000372285 TRAV8-4A0A0B4J246 113 aa12.2□□□□□ -0.46
CD40-202ENST00000372285 A0A1B0GV90 55 aa12.2□□□□□ -0.46
CD40-202ENST00000372285 TIMM17BO60830 172 aa12.2□□□□□ -0.46
CD40-202ENST00000372285 K7EP13 123 aa12.19□□□□□ -0.46
CD40-202ENST00000372285 COX7A2LO14548 114 aa12.19□□□□□ -0.46
CD40-202ENST00000372285 CRPP02741 224 aa12.19□□□□□ -0.46
CD40-202ENST00000372285 PTTG1IPP53801 180 aa12.19□□□□□ -0.46
CD40-202ENST00000372285 CCL18P55774 89 aa12.19□□□□□ -0.46
CD40-202ENST00000372285 FOXI1Q12951 378 aa12.19□□□□□ -0.46
CD40-202ENST00000372285 DNAH10OSP0CZ25 163 aa12.18□□□□□ -0.46
CD40-202ENST00000372285 HERV-K104P63124 156 aa12.18□□□□□ -0.46
CD40-202ENST00000372285 UBE2WQ96B02 151 aa12.18□□□□□ -0.46
CD40-202ENST00000372285 TAX1BP3O14907 124 aa12.17□□□□□ -0.46
CD40-202ENST00000372285 MIAQ16674 131 aa12.17□□□□□ -0.46
CD40-202ENST00000372285 GAGE12HA6NDE8 117 aa12.17□□□□□ -0.46
CD40-202ENST00000372285 SPANXDQ9BXN6 97 aa12.17□□□□□ -0.46
CD40-202ENST00000372285 SPANXCQ9NY87 97 aa12.17□□□□□ -0.46
CD40-202ENST00000372285 TOMM7Q9P0U1 55 aa12.17□□□□□ -0.46
CD40-202ENST00000372285 PRKDCP78527 4128 aaKnown RBP12.15□□□□□ -0.46
CD40-202ENST00000372285 ADAMTSL4-AS1Q5T5F5 129 aa12.15□□□□□ -0.46
CD40-202ENST00000372285 Q6ZVH6 145 aa12.15□□□□□ -0.46
CD40-202ENST00000372285 Q8IZM0 81 aa12.15□□□□□ -0.46
CD40-202ENST00000372285 UPK3BQ9BT76 320 aa12.15□□□□□ -0.46
CD40-202ENST00000372285 SMIM13P0DJ93 91 aa12.14□□□□□ -0.47
CD40-202ENST00000372285 CIRBPQ14011 172 aaKnown RBP12.14□□□□□ -0.47
CD40-202ENST00000372285 TMEM238LA0A1B0GVL6 79 aa12.14□□□□□ -0.47
CD40-202ENST00000372285 A0A1B0GWB2 263 aa12.14□□□□□ -0.47
CD40-202ENST00000372285 A6NJY4 79 aa12.14□□□□□ -0.47
CD40-202ENST00000372285 SFTA2Q6UW10 78 aa12.14□□□□□ -0.47
CD40-202ENST00000372285 NHP2Q9NX24 153 aaKnown RBP12.14□□□□□ -0.47
CD40-202ENST00000372285 APLNQ9ULZ1 77 aa12.14□□□□□ -0.47
CD40-202ENST00000372285 MALP21145 153 aa12.13□□□□□ -0.47
CD40-202ENST00000372285 C6orf226Q5I0X4 101 aa12.13□□□□□ -0.47
CD40-202ENST00000372285 COX11Q9Y6N1 276 aa12.13□□□□□ -0.47
CD40-202ENST00000372285 PRSS2P07478 247 aa12.12□□□□□ -0.47
CD40-202ENST00000372285 KRTAP26-1Q6PEX3 210 aa12.12□□□□□ -0.47
CD40-202ENST00000372285 MUSTN1Q8IVN3 82 aa12.12□□□□□ -0.47
CD40-202ENST00000372285 KLK5Q9Y337 293 aaPredicted RBP12.12□□□□□ -0.47
CD40-202ENST00000372285 KIAA0087Q14695 138 aa12.11□□□□□ -0.47
CD40-202ENST00000372285 DYNC2H1Q8NCM8 4307 aaKnown RBP12.11□□□□□ -0.47
CD40-202ENST00000372285 APOMO95445 188 aa12.11□□□□□ -0.47
CD40-202ENST00000372285 NUPR2A6NF83 97 aa12.1□□□□□ -0.47
CD40-202ENST00000372285 IFITM1P13164 125 aa12.1□□□□□ -0.47
CD40-202ENST00000372285 RPL24P83731 157 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms