RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 FAM19A3Q7Z5A8 133 aa9.04□□□□□ -0.96
LDB3-203ENST00000372056 ATP6V0E2Q8NHE4 81 aa9.04□□□□□ -0.96
LDB3-203ENST00000372056 GEMIN7Q9H840 131 aaKnown RBP9.04□□□□□ -0.96
LDB3-203ENST00000372056 A0A0J9YY99 117 aa9.03□□□□□ -0.96
LDB3-203ENST00000372056 IGHV3-30-3P0DP02 117 aa9.03□□□□□ -0.96
LDB3-203ENST00000372056 ICOSQ9Y6W8 199 aa9.03□□□□□ -0.96
LDB3-203ENST00000372056 NOTCH1P46531 2555 aa9.03□□□□□ -0.96
LDB3-203ENST00000372056 TRAV8-3A0A0A6YYJ7 113 aa9.02□□□□□ -0.96
LDB3-203ENST00000372056 LINC00242Q5T6M2 205 aa9.02□□□□□ -0.96
LDB3-203ENST00000372056 TMEM101Q96IK0 257 aa9.02□□□□□ -0.96
LDB3-203ENST00000372056 VSIG2Q96IQ7 327 aa9.02□□□□□ -0.96
LDB3-203ENST00000372056 TRAV10A0A0B4J240 114 aa9.02□□□□□ -0.97
LDB3-203ENST00000372056 IGHV1-58A0A0C4DH39 117 aa9.02□□□□□ -0.97
LDB3-203ENST00000372056 SCGB1A1P11684 91 aa9.02□□□□□ -0.97
LDB3-203ENST00000372056 CDKN2A-AS1Q9UH64 79 aa9.02□□□□□ -0.97
LDB3-203ENST00000372056 NBEAL1Q6ZS30 2694 aa9.01□□□□□ -0.97
LDB3-203ENST00000372056 SPINK8P0C7L1 97 aa9.01□□□□□ -0.97
LDB3-203ENST00000372056 HERVK_113P63121 156 aa9.01□□□□□ -0.97
LDB3-203ENST00000372056 COX6A2Q02221 97 aa9.01□□□□□ -0.97
LDB3-203ENST00000372056 GAGE6Q13070 117 aa9.01□□□□□ -0.97
LDB3-203ENST00000372056 CHCHD5Q9BSY4 110 aa9.01□□□□□ -0.97
LDB3-203ENST00000372056 TRAV13-1A0A0B4J241 112 aa9□□□□□ -0.97
LDB3-203ENST00000372056 SPANXB1Q9NS25 103 aaPredicted RBP9□□□□□ -0.97
LDB3-203ENST00000372056 NHP2Q9NX24 153 aaKnown RBP9□□□□□ -0.97
LDB3-203ENST00000372056 K7ERJ3 54 aa9□□□□□ -0.97
LDB3-203ENST00000372056 SRSF9Q13242 221 aaKnown RBP eCLIP9□□□□□ -0.97
LDB3-203ENST00000372056 C10orf126Q8N4M7 172 aa9□□□□□ -0.97
LDB3-203ENST00000372056 C15orf53Q8NAA6 179 aa9□□□□□ -0.97
LDB3-203ENST00000372056 DEFB131BA0A096LNP1 70 aa8.99□□□□□ -0.97
LDB3-203ENST00000372056 CMYA5Q8N3K9 4069 aa8.99□□□□□ -0.97
LDB3-203ENST00000372056 MGAM2Q2M2H8 2515 aa8.99□□□□□ -0.97
LDB3-203ENST00000372056 IGLV4-60A0A075B6I1 120 aa8.98□□□□□ -0.97
LDB3-203ENST00000372056 IGLL5B9A064 214 aa8.98□□□□□ -0.97
LDB3-203ENST00000372056 F8W1H4 67 aa8.98□□□□□ -0.97
LDB3-203ENST00000372056 HTN3P15516 51 aa8.98□□□□□ -0.97
LDB3-203ENST00000372056 IGLV5-39A0A0G2JS06 123 aa8.98□□□□□ -0.97
LDB3-203ENST00000372056 A0A1B0GWB2 263 aa8.98□□□□□ -0.97
LDB3-203ENST00000372056 Q6ZTC4 211 aa8.98□□□□□ -0.97
LDB3-203ENST00000372056 DNAH3Q8TD57 4116 aa8.97□□□□□ -0.97
LDB3-203ENST00000372056 A0A096LPF7 62 aa8.97□□□□□ -0.97
LDB3-203ENST00000372056 A0A0J9YXY3 114 aa8.97□□□□□ -0.97
LDB3-203ENST00000372056 ZFAND6Q6FIF0 208 aa8.97□□□□□ -0.97
LDB3-203ENST00000372056 NDUFA12Q9UI09 145 aa8.97□□□□□ -0.97
LDB3-203ENST00000372056 IGHV3-30P01768 117 aa8.96□□□□□ -0.97
LDB3-203ENST00000372056 IGHV3-30-5P0DP03 117 aa8.96□□□□□ -0.97
LDB3-203ENST00000372056 RPL24P83731 157 aaKnown RBP8.96□□□□□ -0.97
LDB3-203ENST00000372056 TENM3Q9P273 2699 aa8.96□□□□□ -0.97
LDB3-203ENST00000372056 SMIM1B2RUZ4 78 aa8.96□□□□□ -0.98
LDB3-203ENST00000372056 NANOS2P60321 138 aaKnown RBP8.96□□□□□ -0.98
LDB3-203ENST00000372056 TMEM238LA0A1B0GVL6 79 aa8.95□□□□□ -0.98
LDB3-203ENST00000372056 A6NJY4 79 aa8.95□□□□□ -0.98
LDB3-203ENST00000372056 LELP1Q5T871 98 aa8.95□□□□□ -0.98
LDB3-203ENST00000372056 SIGMAR1Q99720 223 aa8.95□□□□□ -0.98
LDB3-203ENST00000372056 A0A1B0GUV1 79 aa8.94□□□□□ -0.98
LDB3-203ENST00000372056 LITAFQ99732 161 aa8.94□□□□□ -0.98
LDB3-203ENST00000372056 J3QR89 54 aa8.94□□□□□ -0.98
LDB3-203ENST00000372056 PRO0461Q9UI25 63 aa8.94□□□□□ -0.98
LDB3-203ENST00000372056 NDUFA1O15239 70 aa8.93□□□□□ -0.98
LDB3-203ENST00000372056 WFDC2Q14508 124 aa8.93□□□□□ -0.98
LDB3-203ENST00000372056 IGKV3OR2-268A0A0C4DH90 116 aa8.92□□□□□ -0.98
LDB3-203ENST00000372056 GAGE12HA6NDE8 117 aa8.92□□□□□ -0.98
LDB3-203ENST00000372056 TMEM262E9PQX1 116 aa8.92□□□□□ -0.98
LDB3-203ENST00000372056 LYPD5Q6UWN5 251 aa8.91□□□□□ -0.98
LDB3-203ENST00000372056 FBN3Q75N90 2809 aa8.9□□□□□ -0.98
LDB3-203ENST00000372056 IGHV3OR16-9A0A0B4J2B5 98 aa8.9□□□□□ -0.98
LDB3-203ENST00000372056 LINC00959A0A1B0GUT2 108 aa8.9□□□□□ -0.98
LDB3-203ENST00000372056 TIMM17BO60830 172 aa8.9□□□□□ -0.98
LDB3-203ENST00000372056 ADAMTSL4-AS1Q5T5F5 129 aa8.9□□□□□ -0.98
LDB3-203ENST00000372056 MUSTN1Q8IVN3 82 aa8.89□□□□□ -0.99
LDB3-203ENST00000372056 SPANXDQ9BXN6 97 aa8.89□□□□□ -0.99
LDB3-203ENST00000372056 Q9H8V8 135 aa8.89□□□□□ -0.99
LDB3-203ENST00000372056 SPANXCQ9NY87 97 aa8.89□□□□□ -0.99
LDB3-203ENST00000372056 NUPR2A6NF83 97 aa8.89□□□□□ -0.99
LDB3-203ENST00000372056 H3BMG7 143 aa8.89□□□□□ -0.99
LDB3-203ENST00000372056 CFC1BP0CG36 223 aa8.89□□□□□ -0.99
LDB3-203ENST00000372056 CFC1P0CG37 223 aa8.89□□□□□ -0.99
LDB3-203ENST00000372056 MIAQ16674 131 aa8.89□□□□□ -0.99
LDB3-203ENST00000372056 ZNF625Q96I27 306 aaPredicted RBP8.89□□□□□ -0.99
LDB3-203ENST00000372056 KLK5Q9Y337 293 aaPredicted RBP8.89□□□□□ -0.99
LDB3-203ENST00000372056 A4D1N5 150 aa8.88□□□□□ -0.99
LDB3-203ENST00000372056 APOMO95445 188 aa8.88□□□□□ -0.99
LDB3-203ENST00000372056 A0A087WZ39 114 aa8.87□□□□□ -0.99
LDB3-203ENST00000372056 CCL18P55774 89 aa8.87□□□□□ -0.99
LDB3-203ENST00000372056 ETDBQ3ZM63 59 aa8.87□□□□□ -0.99
LDB3-203ENST00000372056 PGPEP1Q9NXJ5 209 aa8.87□□□□□ -0.99
LDB3-203ENST00000372056 SS18Q15532 418 aa8.87□□□□□ -0.99
LDB3-203ENST00000372056 Q8N3U1 123 aa8.87□□□□□ -0.99
LDB3-203ENST00000372056 PRSS2P07478 247 aa8.86□□□□□ -0.99
LDB3-203ENST00000372056 CLPSL2Q6UWE3 100 aa8.86□□□□□ -0.99
LDB3-203ENST00000372056 LINC00269Q8N2A0 174 aa8.86□□□□□ -0.99
LDB3-203ENST00000372056 COX7B2Q8TF08 81 aa8.86□□□□□ -0.99
LDB3-203ENST00000372056 EIF4EBP3O60516 100 aaPredicted RBP8.85□□□□□ -0.99
LDB3-203ENST00000372056 TSPAN13O95857 204 aa8.85□□□□□ -0.99
LDB3-203ENST00000372056 HERV-K104P63124 156 aa8.85□□□□□ -0.99
LDB3-203ENST00000372056 CIRBPQ14011 172 aaKnown RBP8.85□□□□□ -0.99
LDB3-203ENST00000372056 A0A0B4J2C4 111 aa8.85□□□□□ -0.99
LDB3-203ENST00000372056 XCL1P47992 114 aa8.85□□□□□ -0.99
LDB3-203ENST00000372056 C5orf38Q86SI9 138 aa8.85□□□□□ -0.99
LDB3-203ENST00000372056 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.84□□□□□ -0.99
LDB3-203ENST00000372056 A0A1B0GV72 72 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms