RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 Q8N3U1 123 aa17.97■□□□□ 0.47
ATPAF1-202ENST00000371937 IGLL5B9A064 214 aa17.96■□□□□ 0.47
ATPAF1-202ENST00000371937 HIGD1BQ9P298 99 aa17.96■□□□□ 0.47
ATPAF1-202ENST00000371937 TRAV8-3A0A0A6YYJ7 113 aa17.95■□□□□ 0.46
ATPAF1-202ENST00000371937 M0R143 59 aa17.95■□□□□ 0.46
ATPAF1-202ENST00000371937 TSPEAR-AS2P59090 65 aa17.95■□□□□ 0.46
ATPAF1-202ENST00000371937 REG3AQ06141 175 aa17.95■□□□□ 0.46
ATPAF1-202ENST00000371937 CLPSL2Q6UWE3 100 aa17.94■□□□□ 0.46
ATPAF1-202ENST00000371937 WFDC10BQ8IUB3 73 aa17.94■□□□□ 0.46
ATPAF1-202ENST00000371937 IGHV3OR16-9A0A0B4J2B5 98 aa17.92■□□□□ 0.46
ATPAF1-202ENST00000371937 IGLV5-39A0A0G2JS06 123 aa17.91■□□□□ 0.46
ATPAF1-202ENST00000371937 SMIM1B2RUZ4 78 aa17.91■□□□□ 0.46
ATPAF1-202ENST00000371937 SNHG12Q9BXW3 62 aa17.91■□□□□ 0.46
ATPAF1-202ENST00000371937 PRR34Q9NV39 138 aa17.91■□□□□ 0.46
ATPAF1-202ENST00000371937 KLK12Q9UKR0 248 aa17.91■□□□□ 0.46
ATPAF1-202ENST00000371937 IGHV3-30P01768 117 aa17.9■□□□□ 0.46
ATPAF1-202ENST00000371937 IGHV3-33P01772 117 aa17.9■□□□□ 0.46
ATPAF1-202ENST00000371937 IGHV3-30-5P0DP03 117 aa17.9■□□□□ 0.46
ATPAF1-202ENST00000371937 CCL18P55774 89 aa17.9■□□□□ 0.46
ATPAF1-202ENST00000371937 SCGB1D4Q6XE38 83 aa17.9■□□□□ 0.46
ATPAF1-202ENST00000371937 XCL1P47992 114 aa17.88■□□□□ 0.45
ATPAF1-202ENST00000371937 A0A087WZ39 114 aa17.88■□□□□ 0.45
ATPAF1-202ENST00000371937 HINT1P49773 126 aaPredicted RBP17.87■□□□□ 0.45
ATPAF1-202ENST00000371937 HSD52Q0P140 79 aa17.86■□□□□ 0.45
ATPAF1-202ENST00000371937 LINC01556Q5JQF7 62 aa17.86■□□□□ 0.45
ATPAF1-202ENST00000371937 EREGO14944 169 aa17.86■□□□□ 0.45
ATPAF1-202ENST00000371937 ZFAND6Q6FIF0 208 aa17.86■□□□□ 0.45
ATPAF1-202ENST00000371937 CD164L2Q6UWJ8 174 aa17.86■□□□□ 0.45
ATPAF1-202ENST00000371937 CHCHD10Q8WYQ3 142 aaPredicted RBP17.86■□□□□ 0.45
ATPAF1-202ENST00000371937 CRPP02741 224 aa17.85■□□□□ 0.45
ATPAF1-202ENST00000371937 BATFQ16520 125 aa17.85■□□□□ 0.45
ATPAF1-202ENST00000371937 NDUFA12Q9UI09 145 aa17.85■□□□□ 0.45
ATPAF1-202ENST00000371937 LINC00588Q9Y4M8 146 aa17.85■□□□□ 0.45
ATPAF1-202ENST00000371937 PRKDCP78527 4128 aaKnown RBP17.85■□□□□ 0.45
ATPAF1-202ENST00000371937 LBHQ53QV2 105 aaPredicted RBP17.84■□□□□ 0.45
ATPAF1-202ENST00000371937 C5orf38Q86SI9 138 aa17.84■□□□□ 0.45
ATPAF1-202ENST00000371937 ENHOQ6UWT2 76 aa17.83■□□□□ 0.44
ATPAF1-202ENST00000371937 LINC01561Q8N1V8 128 aa17.83■□□□□ 0.44
ATPAF1-202ENST00000371937 IGLV10-54A0A075B6I4 117 aa17.82■□□□□ 0.44
ATPAF1-202ENST00000371937 TRAV8-4A0A0B4J246 113 aa17.82■□□□□ 0.44
ATPAF1-202ENST00000371937 DNAH10OSP0CZ25 163 aa17.82■□□□□ 0.44
ATPAF1-202ENST00000371937 TAL2Q16559 108 aa17.82■□□□□ 0.44
ATPAF1-202ENST00000371937 UBE2WQ96B02 151 aa17.82■□□□□ 0.44
ATPAF1-202ENST00000371937 BVES-AS1Q5T3Y7 98 aa17.81■□□□□ 0.44
ATPAF1-202ENST00000371937 NUPR2A6NF83 97 aa17.8■□□□□ 0.44
ATPAF1-202ENST00000371937 MIAQ16674 131 aa17.8■□□□□ 0.44
ATPAF1-202ENST00000371937 NDUFA1O15239 70 aa17.79■□□□□ 0.44
ATPAF1-202ENST00000371937 C10orf126Q8N4M7 172 aa17.79■□□□□ 0.44
ATPAF1-202ENST00000371937 HIST1H4GQ99525 98 aa17.79■□□□□ 0.44
ATPAF1-202ENST00000371937 COX7A2LO14548 114 aa17.79■□□□□ 0.44
ATPAF1-202ENST00000371937 UPK3BQ9BT76 320 aa17.79■□□□□ 0.44
ATPAF1-202ENST00000371937 KLK5Q9Y337 293 aaPredicted RBP17.79■□□□□ 0.44
ATPAF1-202ENST00000371937 A0A0J9YXY3 114 aa17.77■□□□□ 0.44
ATPAF1-202ENST00000371937 COX7B2Q8TF08 81 aa17.77■□□□□ 0.44
ATPAF1-202ENST00000371937 APLNQ9ULZ1 77 aa17.77■□□□□ 0.44
ATPAF1-202ENST00000371937 FOXI1Q12951 378 aa17.76■□□□□ 0.43
ATPAF1-202ENST00000371937 SRSF9Q13242 221 aaKnown RBP eCLIP17.75■□□□□ 0.43
ATPAF1-202ENST00000371937 Q9H8V8 135 aa17.75■□□□□ 0.43
ATPAF1-202ENST00000371937 SPANXB1Q9NS25 103 aaPredicted RBP17.75■□□□□ 0.43
ATPAF1-202ENST00000371937 GAGE12HA6NDE8 117 aa17.75■□□□□ 0.43
ATPAF1-202ENST00000371937 ORAOV1Q8WV07 137 aa17.75■□□□□ 0.43
ATPAF1-202ENST00000371937 TOMM7Q9P0U1 55 aa17.75■□□□□ 0.43
ATPAF1-202ENST00000371937 MALP21145 153 aa17.74■□□□□ 0.43
ATPAF1-202ENST00000371937 GCSHP23434 173 aa17.74■□□□□ 0.43
ATPAF1-202ENST00000371937 COL5A1-AS1Q5SY13 56 aa17.74■□□□□ 0.43
ATPAF1-202ENST00000371937 CEND1Q8N111 149 aa17.74■□□□□ 0.43
ATPAF1-202ENST00000371937 TMEM238C9JI98 176 aa17.73■□□□□ 0.43
ATPAF1-202ENST00000371937 TM2D2Q9BX73 214 aa17.73■□□□□ 0.43
ATPAF1-202ENST00000371937 ZNF625Q96I27 306 aaPredicted RBP17.72■□□□□ 0.43
ATPAF1-202ENST00000371937 HERV-K104P63124 156 aa17.72■□□□□ 0.43
ATPAF1-202ENST00000371937 SFTA2Q6UW10 78 aa17.7■□□□□ 0.42
ATPAF1-202ENST00000371937 PRSS2P07478 247 aa17.7■□□□□ 0.42
ATPAF1-202ENST00000371937 Q8IZM0 81 aa17.7■□□□□ 0.42
ATPAF1-202ENST00000371937 TIMM17BO60830 172 aa17.69■□□□□ 0.42
ATPAF1-202ENST00000371937 APOMO95445 188 aa17.69■□□□□ 0.42
ATPAF1-202ENST00000371937 C6orf226Q5I0X4 101 aa17.69■□□□□ 0.42
ATPAF1-202ENST00000371937 CIRBPQ14011 172 aaKnown RBP17.68■□□□□ 0.42
ATPAF1-202ENST00000371937 A6NDN8 102 aa17.68■□□□□ 0.42
ATPAF1-202ENST00000371937 PTTG1IPP53801 180 aa17.68■□□□□ 0.42
ATPAF1-202ENST00000371937 C1orf43Q9BWL3 253 aa17.68■□□□□ 0.42
ATPAF1-202ENST00000371937 UBE2DNLQ8IWF7 75 aa17.67■□□□□ 0.42
ATPAF1-202ENST00000371937 DYNC2H1Q8NCM8 4307 aaKnown RBP17.67■□□□□ 0.42
ATPAF1-202ENST00000371937 IBA57-AS1B1ANH7 110 aa17.66■□□□□ 0.42
ATPAF1-202ENST00000371937 FXYD2P54710 66 aa17.66■□□□□ 0.42
ATPAF1-202ENST00000371937 K7EP13 123 aa17.65■□□□□ 0.42
ATPAF1-202ENST00000371937 LITAFQ99732 161 aa17.65■□□□□ 0.42
ATPAF1-202ENST00000371937 FBN3Q75N90 2809 aa17.65■□□□□ 0.42
ATPAF1-202ENST00000371937 Q6ZVH6 145 aa17.65■□□□□ 0.42
ATPAF1-202ENST00000371937 KRTAP26-1Q6PEX3 210 aa17.63■□□□□ 0.41
ATPAF1-202ENST00000371937 CFAP161Q6P656 301 aa17.63■□□□□ 0.41
ATPAF1-202ENST00000371937 SPANXDQ9BXN6 97 aa17.63■□□□□ 0.41
ATPAF1-202ENST00000371937 SPANXCQ9NY87 97 aa17.63■□□□□ 0.41
ATPAF1-202ENST00000371937 TMEM238LA0A1B0GVL6 79 aa17.62■□□□□ 0.41
ATPAF1-202ENST00000371937 A6NJY4 79 aa17.62■□□□□ 0.41
ATPAF1-202ENST00000371937 MEIG1Q5JSS6 88 aa17.62■□□□□ 0.41
ATPAF1-202ENST00000371937 IGKV2D-24A0A075B6R9 120 aa17.61■□□□□ 0.41
ATPAF1-202ENST00000371937 CXCL5P42830 114 aa17.61■□□□□ 0.41
ATPAF1-202ENST00000371937 CKS1BP61024 79 aa17.61■□□□□ 0.41
ATPAF1-202ENST00000371937 KIAA0087Q14695 138 aa17.61■□□□□ 0.41
ATPAF1-202ENST00000371937 ADAMTSL4-AS1Q5T5F5 129 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms