RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 CMC4P56277 68 aaPredicted RBP12.82□□□□□ -0.36
UBQLN4-201ENST00000368309 CIRBPQ14011 172 aaKnown RBP12.82□□□□□ -0.36
UBQLN4-201ENST00000368309 TMEM243Q9BU79 118 aa12.82□□□□□ -0.36
UBQLN4-201ENST00000368309 CLEC2BQ92478 149 aa12.81□□□□□ -0.36
UBQLN4-201ENST00000368309 TIMM17BO60830 172 aa12.81□□□□□ -0.36
UBQLN4-201ENST00000368309 RPL13AP40429 203 aaKnown RBP12.81□□□□□ -0.36
UBQLN4-201ENST00000368309 PRIMA1Q86XR5 153 aa12.8□□□□□ -0.36
UBQLN4-201ENST00000368309 LINC00308Q8TCZ7 52 aa12.8□□□□□ -0.36
UBQLN4-201ENST00000368309 NTN5Q8WTR8 489 aaPredicted RBP12.8□□□□□ -0.36
UBQLN4-201ENST00000368309 IFITM1P13164 125 aa12.8□□□□□ -0.36
UBQLN4-201ENST00000368309 GAGE6Q13070 117 aa12.8□□□□□ -0.36
UBQLN4-201ENST00000368309 HECTD1Q9ULT8 2610 aa12.8□□□□□ -0.36
UBQLN4-201ENST00000368309 MEIG1Q5JSS6 88 aa12.79□□□□□ -0.36
UBQLN4-201ENST00000368309 VWFP04275 2813 aa12.79□□□□□ -0.36
UBQLN4-201ENST00000368309 F5H768 121 aa12.79□□□□□ -0.36
UBQLN4-201ENST00000368309 HILS1P60008 231 aa12.79□□□□□ -0.36
UBQLN4-201ENST00000368309 MT-ATP8P03928 68 aa12.78□□□□□ -0.36
UBQLN4-201ENST00000368309 COX6CP09669 75 aa12.78□□□□□ -0.36
UBQLN4-201ENST00000368309 DEFB130BP0DP73 79 aa12.78□□□□□ -0.36
UBQLN4-201ENST00000368309 DEFB130AP0DP74 79 aa12.78□□□□□ -0.36
UBQLN4-201ENST00000368309 TRBV6-4A0A1B0GX49 114 aa12.78□□□□□ -0.36
UBQLN4-201ENST00000368309 XGP55808 180 aa12.78□□□□□ -0.36
UBQLN4-201ENST00000368309 OVOL2Q9BRP0 275 aa12.78□□□□□ -0.36
UBQLN4-201ENST00000368309 SOSTDC1Q6X4U4 206 aa12.77□□□□□ -0.36
UBQLN4-201ENST00000368309 FAM19A3Q7Z5A8 133 aa12.77□□□□□ -0.36
UBQLN4-201ENST00000368309 FAM110AQ9BQ89 295 aa12.77□□□□□ -0.37
UBQLN4-201ENST00000368309 TEX49A0A1B0GTD5 131 aa12.76□□□□□ -0.37
UBQLN4-201ENST00000368309 KRTAP10-3P60369 221 aa12.76□□□□□ -0.37
UBQLN4-201ENST00000368309 FHL2Q14192 279 aa12.76□□□□□ -0.37
UBQLN4-201ENST00000368309 SCGB1A1P11684 91 aa12.76□□□□□ -0.37
UBQLN4-201ENST00000368309 RNF183Q96D59 192 aa12.76□□□□□ -0.37
UBQLN4-201ENST00000368309 IGLV4-60A0A075B6I1 120 aa12.75□□□□□ -0.37
UBQLN4-201ENST00000368309 TRBV10-2A0A0K0K1G8 114 aa12.75□□□□□ -0.37
UBQLN4-201ENST00000368309 H7C423 109 aa12.75□□□□□ -0.37
UBQLN4-201ENST00000368309 J3QKU1 62 aa12.74□□□□□ -0.37
UBQLN4-201ENST00000368309 CHCHD5Q9BSY4 110 aa12.74□□□□□ -0.37
UBQLN4-201ENST00000368309 C2orf82Q6UX34 121 aa12.74□□□□□ -0.37
UBQLN4-201ENST00000368309 TOMM7Q9P0U1 55 aa12.74□□□□□ -0.37
UBQLN4-201ENST00000368309 PF4P02776 101 aa12.74□□□□□ -0.37
UBQLN4-201ENST00000368309 TRBV6-8A0A0A6YYG3 113 aa12.72□□□□□ -0.37
UBQLN4-201ENST00000368309 M0QXV9 152 aa12.72□□□□□ -0.37
UBQLN4-201ENST00000368309 CRLF1O75462 422 aa12.72□□□□□ -0.37
UBQLN4-201ENST00000368309 LST1O00453 97 aa12.7□□□□□ -0.38
UBQLN4-201ENST00000368309 CIDEAO60543 219 aa12.7□□□□□ -0.38
UBQLN4-201ENST00000368309 SPATA3Q8NHX4 192 aa12.69□□□□□ -0.38
UBQLN4-201ENST00000368309 TMEM262E9PQX1 116 aa12.68□□□□□ -0.38
UBQLN4-201ENST00000368309 HERV-K104P63124 156 aa12.68□□□□□ -0.38
UBQLN4-201ENST00000368309 C5orf38Q86SI9 138 aa12.68□□□□□ -0.38
UBQLN4-201ENST00000368309 COX7B2Q8TF08 81 aa12.68□□□□□ -0.38
UBQLN4-201ENST00000368309 UBE2WQ96B02 151 aa12.68□□□□□ -0.38
UBQLN4-201ENST00000368309 A0A096LPF7 62 aa12.67□□□□□ -0.38
UBQLN4-201ENST00000368309 OTOGQ6ZRI0 2925 aa12.67□□□□□ -0.38
UBQLN4-201ENST00000368309 LINC00482Q8N8I6 264 aa12.67□□□□□ -0.38
UBQLN4-201ENST00000368309 GYPEP15421 78 aa12.66□□□□□ -0.38
UBQLN4-201ENST00000368309 TENM1Q9UKZ4 2725 aa12.66□□□□□ -0.38
UBQLN4-201ENST00000368309 MIR7-3HGQ8N6C7 128 aa12.65□□□□□ -0.38
UBQLN4-201ENST00000368309 COPS9Q8WXC6 57 aa12.65□□□□□ -0.38
UBQLN4-201ENST00000368309 IGHV3OR16-9A0A0B4J2B5 98 aa12.65□□□□□ -0.38
UBQLN4-201ENST00000368309 LY6G6DO95868 133 aa12.64□□□□□ -0.39
UBQLN4-201ENST00000368309 H3BT86 120 aa12.64□□□□□ -0.39
UBQLN4-201ENST00000368309 DEFB4AO15263 64 aa12.64□□□□□ -0.39
UBQLN4-201ENST00000368309 LINC01600Q96MT4 127 aa12.64□□□□□ -0.39
UBQLN4-201ENST00000368309 CKS1BP61024 79 aa12.64□□□□□ -0.39
UBQLN4-201ENST00000368309 SHISA2Q6UWI4 295 aa12.63□□□□□ -0.39
UBQLN4-201ENST00000368309 LINC00158P58513 81 aa12.63□□□□□ -0.39
UBQLN4-201ENST00000368309 X6R8D5 127 aa12.63□□□□□ -0.39
UBQLN4-201ENST00000368309 KMT2BQ9UMN6 2715 aaPredicted RBP12.62□□□□□ -0.39
UBQLN4-201ENST00000368309 TRAV8-4A0A0B4J246 113 aa12.62□□□□□ -0.39
UBQLN4-201ENST00000368309 COX7A2LO14548 114 aa12.62□□□□□ -0.39
UBQLN4-201ENST00000368309 CLPSL2Q6UWE3 100 aa12.62□□□□□ -0.39
UBQLN4-201ENST00000368309 KIR2DL5BQ8NHK3 375 aa12.62□□□□□ -0.39
UBQLN4-201ENST00000368309 C11orf68Q9H3H3 251 aaKnown RBP12.62□□□□□ -0.39
UBQLN4-201ENST00000368309 PFN2P35080 140 aa12.61□□□□□ -0.39
UBQLN4-201ENST00000368309 LINC00959A0A1B0GUT2 108 aa12.6□□□□□ -0.39
UBQLN4-201ENST00000368309 XCL1P47992 114 aa12.6□□□□□ -0.39
UBQLN4-201ENST00000368309 ATRQ13535 2644 aa12.6□□□□□ -0.39
UBQLN4-201ENST00000368309 A0A1B0GV72 72 aa12.6□□□□□ -0.39
UBQLN4-201ENST00000368309 FAM222AQ5U5X8 452 aa12.59□□□□□ -0.39
UBQLN4-201ENST00000368309 A0A087WZ39 114 aa12.59□□□□□ -0.39
UBQLN4-201ENST00000368309 SND1-IT1Q9HBX3 110 aa12.59□□□□□ -0.39
UBQLN4-201ENST00000368309 LINC00337Q8N6G1 96 aa12.58□□□□□ -0.4
UBQLN4-201ENST00000368309 LINC00612Q8N6U2 182 aa12.58□□□□□ -0.4
UBQLN4-201ENST00000368309 DEFB135Q30KP9 77 aa12.58□□□□□ -0.4
UBQLN4-201ENST00000368309 FAM218AQ96MZ4 157 aa12.58□□□□□ -0.4
UBQLN4-201ENST00000368309 INAFM1C9JVW0 142 aa12.58□□□□□ -0.4
UBQLN4-201ENST00000368309 IGKV2-28A0A075B6P5 120 aa12.57□□□□□ -0.4
UBQLN4-201ENST00000368309 IGKV2D-28P01615 120 aa12.57□□□□□ -0.4
UBQLN4-201ENST00000368309 PRO0255Q9UI72 69 aa12.57□□□□□ -0.4
UBQLN4-201ENST00000368309 NSD1Q96L73 2696 aaPredicted RBP12.57□□□□□ -0.4
UBQLN4-201ENST00000368309 C6orf226Q5I0X4 101 aa12.56□□□□□ -0.4
UBQLN4-201ENST00000368309 TRRAPQ9Y4A5 3859 aa12.56□□□□□ -0.4
UBQLN4-201ENST00000368309 SNCGO76070 127 aa12.56□□□□□ -0.4
UBQLN4-201ENST00000368309 CRPP02741 224 aa12.56□□□□□ -0.4
UBQLN4-201ENST00000368309 CCL18P55774 89 aa12.56□□□□□ -0.4
UBQLN4-201ENST00000368309 PAX4O43316 350 aa12.55□□□□□ -0.4
UBQLN4-201ENST00000368309 TRAV13-2A0A0B4J235 113 aa12.54□□□□□ -0.4
UBQLN4-201ENST00000368309 CITED1Q99966 193 aa12.54□□□□□ -0.4
UBQLN4-201ENST00000368309 C15orf53Q8NAA6 179 aa12.54□□□□□ -0.4
UBQLN4-201ENST00000368309 Q9HAA7 133 aa12.54□□□□□ -0.4
UBQLN4-201ENST00000368309 Q8N3U1 123 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms