RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 KNTC1P50748 2209 aa1.13□□□□□ -2.23
RNU6-1249P-201ENST00000363237 NLRP1Q9C000 1473 aa1.12□□□□□ -2.23
RNU6-1249P-201ENST00000363237 MAP3K4Q9Y6R4 1608 aa1.12□□□□□ -2.23
RNU6-1249P-201ENST00000363237 ZNF815PA8K554 130 aa1.12□□□□□ -2.23
RNU6-1249P-201ENST00000363237 C10orf142B7Z368 130 aa1.12□□□□□ -2.23
RNU6-1249P-201ENST00000363237 M0R3E3 92 aa1.12□□□□□ -2.23
RNU6-1249P-201ENST00000363237 LCN9Q8WX39 176 aa1.12□□□□□ -2.23
RNU6-1249P-201ENST00000363237 PRO1933Q9H354 126 aa1.12□□□□□ -2.23
RNU6-1249P-201ENST00000363237 C10orf95Q9H7T3 257 aa1.12□□□□□ -2.23
RNU6-1249P-201ENST00000363237 UACAQ9BZF9 1416 aa1.12□□□□□ -2.23
RNU6-1249P-201ENST00000363237 A0A0D9SG42 100 aa1.11□□□□□ -2.23
RNU6-1249P-201ENST00000363237 BCE1O60756 84 aa1.11□□□□□ -2.23
RNU6-1249P-201ENST00000363237 ZNF720Q7Z2F6 126 aa1.11□□□□□ -2.23
RNU6-1249P-201ENST00000363237 UBE2DNLQ8IWF7 75 aa1.11□□□□□ -2.23
RNU6-1249P-201ENST00000363237 TMEM263Q8WUH6 116 aaKnown RBP1.11□□□□□ -2.23
RNU6-1249P-201ENST00000363237 SUPT6HQ7KZ85 1726 aaKnown RBP1.11□□□□□ -2.23
RNU6-1249P-201ENST00000363237 POLA1P09884 1462 aaPredicted RBP1.11□□□□□ -2.23
RNU6-1249P-201ENST00000363237 NRXN1Q9ULB1 1477 aa1.11□□□□□ -2.23
RNU6-1249P-201ENST00000363237 SHPRHQ149N8 1683 aa1.1□□□□□ -2.23
RNU6-1249P-201ENST00000363237 PLIN4Q96Q06 1357 aa1.1□□□□□ -2.23
RNU6-1249P-201ENST00000363237 EDC4Q6P2E9 1401 aaKnown RBP1.1□□□□□ -2.23
RNU6-1249P-201ENST00000363237 CYB5AP00167 134 aa1.1□□□□□ -2.23
RNU6-1249P-201ENST00000363237 KRTAP5-7Q6L8G8 165 aa1.1□□□□□ -2.23
RNU6-1249P-201ENST00000363237 KIF14Q15058 1648 aa1.1□□□□□ -2.23
RNU6-1249P-201ENST00000363237 ARHGAP35Q9NRY4 1499 aa1.1□□□□□ -2.23
RNU6-1249P-201ENST00000363237 LRP6O75581 1613 aa1.09□□□□□ -2.23
RNU6-1249P-201ENST00000363237 C7orf77A4D0Y5 90 aa1.09□□□□□ -2.23
RNU6-1249P-201ENST00000363237 NMBP08949 121 aa1.09□□□□□ -2.23
RNU6-1249P-201ENST00000363237 SMIM11AP58511 58 aa1.09□□□□□ -2.23
RNU6-1249P-201ENST00000363237 HAMPP81172 84 aa1.09□□□□□ -2.23
RNU6-1249P-201ENST00000363237 LINC00846Q9NV44 126 aa1.09□□□□□ -2.23
RNU6-1249P-201ENST00000363237 RABAC1Q9UI14 185 aa1.09□□□□□ -2.23
RNU6-1249P-201ENST00000363237 MAGI2Q86UL8 1455 aa1.09□□□□□ -2.24
RNU6-1249P-201ENST00000363237 HMGN3Q15651 99 aa1.08□□□□□ -2.24
RNU6-1249P-201ENST00000363237 ETDBQ3ZM63 59 aa1.08□□□□□ -2.24
RNU6-1249P-201ENST00000363237 Q6JHZ5 121 aa1.08□□□□□ -2.24
RNU6-1249P-201ENST00000363237 S100A16Q96FQ6 103 aaKnown RBP1.08□□□□□ -2.24
RNU6-1249P-201ENST00000363237 HIGD1BQ9P298 99 aa1.08□□□□□ -2.24
RNU6-1249P-201ENST00000363237 MYO7AQ13402 2215 aa1.08□□□□□ -2.24
RNU6-1249P-201ENST00000363237 KNDC1Q76NI1 1749 aa1.07□□□□□ -2.24
RNU6-1249P-201ENST00000363237 XRN1Q8IZH2 1706 aaKnown RBP1.07□□□□□ -2.24
RNU6-1249P-201ENST00000363237 CRYBG1Q9Y4K1 1723 aa1.07□□□□□ -2.24
RNU6-1249P-201ENST00000363237 S100A3P33764 101 aa1.07□□□□□ -2.24
RNU6-1249P-201ENST00000363237 PEA15Q15121 130 aa1.07□□□□□ -2.24
RNU6-1249P-201ENST00000363237 CACNA1CQ13936 2221 aa1.07□□□□□ -2.24
RNU6-1249P-201ENST00000363237 C1orf167Q5SNV9 1468 aa1.06□□□□□ -2.24
RNU6-1249P-201ENST00000363237 A0A087WVE0 104 aa1.06□□□□□ -2.24
RNU6-1249P-201ENST00000363237 F8WEM9 126 aa1.06□□□□□ -2.24
RNU6-1249P-201ENST00000363237 ARMS2P0C7Q2 107 aa1.06□□□□□ -2.24
RNU6-1249P-201ENST00000363237 KRTAP21-2Q3LI59 83 aa1.06□□□□□ -2.24
RNU6-1249P-201ENST00000363237 C10orf113Q5VZT2 155 aa1.06□□□□□ -2.24
RNU6-1249P-201ENST00000363237 TARBP1Q13395 1621 aaKnown RBP1.06□□□□□ -2.24
RNU6-1249P-201ENST00000363237 C5P01031 1676 aa1.06□□□□□ -2.24
RNU6-1249P-201ENST00000363237 KMT2BQ9UMN6 2715 aaPredicted RBP1.06□□□□□ -2.24
RNU6-1249P-201ENST00000363237 CUX1P39880 1505 aa1.05□□□□□ -2.24
RNU6-1249P-201ENST00000363237 ERCC6L2Q5T890 1561 aa1.05□□□□□ -2.24
RNU6-1249P-201ENST00000363237 TRBV6-1A0A0K0K1D8 114 aa1.05□□□□□ -2.24
RNU6-1249P-201ENST00000363237 FAM103A1Q9BTL3 118 aaKnown RBP1.05□□□□□ -2.24
RNU6-1249P-201ENST00000363237 PAPPA2Q9BXP8 1791 aa1.05□□□□□ -2.24
RNU6-1249P-201ENST00000363237 H3BQF6 201 aa1.04□□□□□ -2.24
RNU6-1249P-201ENST00000363237 ALKAL2Q6UX46 152 aa1.04□□□□□ -2.24
RNU6-1249P-201ENST00000363237 ASH1LQ9NR48 2969 aaKnown RBP1.04□□□□□ -2.24
RNU6-1249P-201ENST00000363237 A0A0G2JMZ2 1700 aa1.03□□□□□ -2.24
RNU6-1249P-201ENST00000363237 HELZ2Q9BYK8 2649 aaKnown RBP1.03□□□□□ -2.24
RNU6-1249P-201ENST00000363237 CADP27708 2225 aa1.03□□□□□ -2.24
RNU6-1249P-201ENST00000363237 NAV3Q8IVL0 2385 aa1.03□□□□□ -2.24
RNU6-1249P-201ENST00000363237 SSBP3-AS1Q7Z2R9 100 aa1.03□□□□□ -2.24
RNU6-1249P-201ENST00000363237 ZFHX3Q15911 3703 aa1.03□□□□□ -2.25
RNU6-1249P-201ENST00000363237 HMGN2P05204 90 aaKnown RBP1.02□□□□□ -2.25
RNU6-1249P-201ENST00000363237 LAMC1P11047 1609 aa1.02□□□□□ -2.25
RNU6-1249P-201ENST00000363237 SNRPFP62306 86 aaKnown RBP1.02□□□□□ -2.25
RNU6-1249P-201ENST00000363237 KCPQ6ZWJ8 1503 aa1.02□□□□□ -2.25
RNU6-1249P-201ENST00000363237 FDCSPQ8NFU4 85 aa1.02□□□□□ -2.25
RNU6-1249P-201ENST00000363237 S100A13Q99584 98 aa1.02□□□□□ -2.25
RNU6-1249P-201ENST00000363237 ALKQ9UM73 1620 aa1.02□□□□□ -2.25
RNU6-1249P-201ENST00000363237 ANKRD36A6QL64 1941 aa1.01□□□□□ -2.25
RNU6-1249P-201ENST00000363237 PKD1L3Q7Z443 1732 aa1.01□□□□□ -2.25
RNU6-1249P-201ENST00000363237 TMEM131LA2VDJ0 1609 aa1.01□□□□□ -2.25
RNU6-1249P-201ENST00000363237 DCAF1Q9Y4B6 1507 aa1.01□□□□□ -2.25
RNU6-1249P-201ENST00000363237 A0A0D9SFI3 127 aa1.01□□□□□ -2.25
RNU6-1249P-201ENST00000363237 D6R8Y8 96 aa1.01□□□□□ -2.25
RNU6-1249P-201ENST00000363237 LEPROTL1O95214 131 aa1.01□□□□□ -2.25
RNU6-1249P-201ENST00000363237 TDRG1Q3Y452 100 aa1.01□□□□□ -2.25
RNU6-1249P-201ENST00000363237 MUSTN1Q8IVN3 82 aa1.01□□□□□ -2.25
RNU6-1249P-201ENST00000363237 LINC01600Q96MT4 127 aa1.01□□□□□ -2.25
RNU6-1249P-201ENST00000363237 PSENENQ9NZ42 101 aa1.01□□□□□ -2.25
RNU6-1249P-201ENST00000363237 DIP2BQ9P265 1576 aa1□□□□□ -2.25
RNU6-1249P-201ENST00000363237 ERVK-7P63135 1459 aa1□□□□□ -2.25
RNU6-1249P-201ENST00000363237 H0Y9P7 68 aa1□□□□□ -2.25
RNU6-1249P-201ENST00000363237 SPINK7P58062 85 aa1□□□□□ -2.25
RNU6-1249P-201ENST00000363237 COX6A2Q02221 97 aa1□□□□□ -2.25
RNU6-1249P-201ENST00000363237 SPATA8Q6RVD6 105 aa1□□□□□ -2.25
RNU6-1249P-201ENST00000363237 CNFNQ9BYD5 112 aa1□□□□□ -2.25
RNU6-1249P-201ENST00000363237 SPCS1Q9Y6A9 102 aa1□□□□□ -2.25
RNU6-1249P-201ENST00000363237 NHSL1Q5SYE7 1610 aa1□□□□□ -2.25
RNU6-1249P-201ENST00000363237 KANTRA0A1W2PQU2 76 aa0.99□□□□□ -2.25
RNU6-1249P-201ENST00000363237 ACYP1P07311 99 aa0.99□□□□□ -2.25
RNU6-1249P-201ENST00000363237 DEFB107AQ8IZN7 70 aa0.99□□□□□ -2.25
RNU6-1249P-201ENST00000363237 PLAC8Q9NZF1 115 aa0.99□□□□□ -2.25
RNU6-1249P-201ENST00000363237 NEXMIFQ5QGS0 1516 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms