RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 COL4A6Q14031 1691 aa0.25□□□□□ -2.37
RPL39-201ENST00000361575 EHBP1L1Q8N3D4 1523 aa0.25□□□□□ -2.37
RPL39-201ENST00000361575 SFTA2Q6UW10 78 aa0.25□□□□□ -2.37
RPL39-201ENST00000361575 NHSL1Q5SYE7 1610 aa0.24□□□□□ -2.37
RPL39-201ENST00000361575 TMEM262E9PQX1 116 aa0.24□□□□□ -2.37
RPL39-201ENST00000361575 CGREF1Q99674 301 aa0.24□□□□□ -2.37
RPL39-201ENST00000361575 HIVEP3Q5T1R4 2406 aa0.24□□□□□ -2.37
RPL39-201ENST00000361575 COL7A1Q02388 2944 aa0.24□□□□□ -2.37
RPL39-201ENST00000361575 ABCC5O15440 1437 aa0.23□□□□□ -2.37
RPL39-201ENST00000361575 NAP1L6A6NFF2 107 aa0.23□□□□□ -2.37
RPL39-201ENST00000361575 ATP6V1G2-DDX39BF2Z307 99 aa0.23□□□□□ -2.37
RPL39-201ENST00000361575 M0R3E3 92 aa0.23□□□□□ -2.37
RPL39-201ENST00000361575 C12orf57Q99622 126 aa0.23□□□□□ -2.37
RPL39-201ENST00000361575 TP53AIP1Q9HCN2 124 aa0.23□□□□□ -2.37
RPL39-201ENST00000361575 TOPAZ1Q8N9V7 1692 aa0.23□□□□□ -2.37
RPL39-201ENST00000361575 MRC2Q9UBG0 1479 aa0.22□□□□□ -2.37
RPL39-201ENST00000361575 hADV29S1A0JD25 119 aa0.22□□□□□ -2.37
RPL39-201ENST00000361575 MGPP08493 103 aa0.22□□□□□ -2.37
RPL39-201ENST00000361575 PRO1854Q9UHT4 67 aa0.22□□□□□ -2.37
RPL39-201ENST00000361575 U3KQA8 63 aa0.22□□□□□ -2.37
RPL39-201ENST00000361575 TOP2BQ02880 1626 aa0.22□□□□□ -2.37
RPL39-201ENST00000361575 ANKRD17O75179 2603 aaKnown RBP0.22□□□□□ -2.37
RPL39-201ENST00000361575 WNK2Q9Y3S1 2297 aa0.22□□□□□ -2.37
RPL39-201ENST00000361575 VWFP04275 2813 aa0.22□□□□□ -2.37
RPL39-201ENST00000361575 PKD1L1Q8TDX9 2849 aa0.22□□□□□ -2.37
RPL39-201ENST00000361575 NCOR1O75376 2440 aa0.22□□□□□ -2.37
RPL39-201ENST00000361575 CHD6Q8TD26 2715 aa0.22□□□□□ -2.37
RPL39-201ENST00000361575 DMBT1Q9UGM3 2413 aaPredicted RBP0.21□□□□□ -2.38
RPL39-201ENST00000361575 PAPPAQ13219 1627 aa0.2□□□□□ -2.38
RPL39-201ENST00000361575 PKDREJQ9NTG1 2253 aa0.2□□□□□ -2.38
RPL39-201ENST00000361575 DOPEY2Q9Y3R5 2298 aa0.2□□□□□ -2.38
RPL39-201ENST00000361575 COX6CP09669 75 aa0.2□□□□□ -2.38
RPL39-201ENST00000361575 Q8IZM0 81 aa0.2□□□□□ -2.38
RPL39-201ENST00000361575 TMEM263Q8WUH6 116 aaKnown RBP0.2□□□□□ -2.38
RPL39-201ENST00000361575 ADGRL2O95490 1459 aa0.2□□□□□ -2.38
RPL39-201ENST00000361575 CRYM-AS1A6NIL9 109 aa0.19□□□□□ -2.38
RPL39-201ENST00000361575 TCEAL7Q9BRU2 100 aa0.19□□□□□ -2.38
RPL39-201ENST00000361575 GVINP1Q7Z2Y8 2422 aa0.19□□□□□ -2.38
RPL39-201ENST00000361575 TENM4Q6N022 2769 aa0.18□□□□□ -2.38
RPL39-201ENST00000361575 SPTBN1Q01082 2364 aaKnown RBP0.18□□□□□ -2.38
RPL39-201ENST00000361575 TMEM218A2RU14 115 aa0.18□□□□□ -2.38
RPL39-201ENST00000361575 KRTDAPP60985 99 aa0.18□□□□□ -2.38
RPL39-201ENST00000361575 WFDC2Q14508 124 aa0.18□□□□□ -2.38
RPL39-201ENST00000361575 C10orf113Q5VZT2 155 aa0.18□□□□□ -2.38
RPL39-201ENST00000361575 FAIMQ9NVQ4 179 aa0.18□□□□□ -2.38
RPL39-201ENST00000361575 FAM223BA6NKX1 122 aa0.17□□□□□ -2.38
RPL39-201ENST00000361575 TRAPPC2P0DI81 140 aa0.17□□□□□ -2.38
RPL39-201ENST00000361575 TRAPPC2BP0DI82 140 aa0.17□□□□□ -2.38
RPL39-201ENST00000361575 Q5VSD8 79 aa0.17□□□□□ -2.38
RPL39-201ENST00000361575 ABCA2Q9BZC7 2435 aa0.17□□□□□ -2.38
RPL39-201ENST00000361575 ARHGEF12Q9NZN5 1544 aa0.17□□□□□ -2.38
RPL39-201ENST00000361575 RBP2P50120 134 aa0.16□□□□□ -2.38
RPL39-201ENST00000361575 SEC11AP67812 179 aa0.16□□□□□ -2.38
RPL39-201ENST00000361575 PPRC1Q5VV67 1664 aaKnown RBP0.16□□□□□ -2.38
RPL39-201ENST00000361575 FSIP2Q5CZC0 6907 aa0.16□□□□□ -2.38
RPL39-201ENST00000361575 SYNE2Q8WXH0 6885 aaKnown RBP0.16□□□□□ -2.38
RPL39-201ENST00000361575 TRAV30A0A087WSZ9 112 aa0.15□□□□□ -2.39
RPL39-201ENST00000361575 UBA52P62987 128 aaKnown RBP0.15□□□□□ -2.39
RPL39-201ENST00000361575 LCN9Q8WX39 176 aa0.15□□□□□ -2.39
RPL39-201ENST00000361575 PDCD11Q14690 1871 aaKnown RBP0.15□□□□□ -2.39
RPL39-201ENST00000361575 NUP188Q5SRE5 1749 aa0.15□□□□□ -2.39
RPL39-201ENST00000361575 MAGI1Q96QZ7 1491 aaPredicted RBP0.15□□□□□ -2.39
RPL39-201ENST00000361575 TRBV6-1A0A0K0K1D8 114 aa0.14□□□□□ -2.39
RPL39-201ENST00000361575 CFDP00746 253 aaPredicted RBP0.14□□□□□ -2.39
RPL39-201ENST00000361575 SAA2P0DJI9 122 aaPredicted RBP0.14□□□□□ -2.39
RPL39-201ENST00000361575 PIGYQ3MUY2 71 aa0.14□□□□□ -2.39
RPL39-201ENST00000361575 TULP4Q9NRJ4 1543 aa0.13□□□□□ -2.39
RPL39-201ENST00000361575 MT-ATP8P03928 68 aa0.13□□□□□ -2.39
RPL39-201ENST00000361575 S100A10P60903 97 aa0.13□□□□□ -2.39
RPL39-201ENST00000361575 DEFB123Q8N688 67 aa0.13□□□□□ -2.39
RPL39-201ENST00000361575 LINC00846Q9NV44 126 aa0.13□□□□□ -2.39
RPL39-201ENST00000361575 PTPN13Q12923 2485 aa0.13□□□□□ -2.39
RPL39-201ENST00000361575 CACNA1AO00555 2505 aa0.12□□□□□ -2.39
RPL39-201ENST00000361575 GNGT2O14610 69 aa0.12□□□□□ -2.39
RPL39-201ENST00000361575 LINC01600Q96MT4 127 aa0.12□□□□□ -2.39
RPL39-201ENST00000361575 SSPOA2VEC9 5147 aa0.12□□□□□ -2.39
RPL39-201ENST00000361575 FLNCQ14315 2725 aa0.12□□□□□ -2.39
RPL39-201ENST00000361575 MACF1Q9UPN3 7388 aaKnown RBP0.12□□□□□ -2.39
RPL39-201ENST00000361575 A0A1B0GWA3 101 aa0.11□□□□□ -2.39
RPL39-201ENST00000361575 HUWE1Q7Z6Z7 4374 aaKnown RBP0.1□□□□□ -2.39
RPL39-201ENST00000361575 C1orf167Q5SNV9 1468 aa0.1□□□□□ -2.39
RPL39-201ENST00000361575 NDUFC1O43677 76 aa0.1□□□□□ -2.39
RPL39-201ENST00000361575 MPC2O95563 127 aa0.1□□□□□ -2.39
RPL39-201ENST00000361575 PRO1933Q9H354 126 aa0.1□□□□□ -2.39
RPL39-201ENST00000361575 CNTLNQ9NXG0 1405 aa0.1□□□□□ -2.39
RPL39-201ENST00000361575 A0A0G2JMZ2 1700 aa0.1□□□□□ -2.39
RPL39-201ENST00000361575 POLA1P09884 1462 aaPredicted RBP0.1□□□□□ -2.39
RPL39-201ENST00000361575 PRDM15P57071 1507 aaPredicted RBP0.09□□□□□ -2.39
RPL39-201ENST00000361575 TSC2P49815 1807 aa0.09□□□□□ -2.39
RPL39-201ENST00000361575 FXYD6-FXYD2A0A087WZ82 144 aa0.09□□□□□ -2.4
RPL39-201ENST00000361575 LINC00959A0A1B0GUT2 108 aa0.09□□□□□ -2.4
RPL39-201ENST00000361575 SPRR1AP35321 89 aa0.09□□□□□ -2.4
RPL39-201ENST00000361575 DEFB109BQ30KR1 87 aa0.09□□□□□ -2.4
RPL39-201ENST00000361575 GAPVD1Q14C86 1478 aa0.09□□□□□ -2.4
RPL39-201ENST00000361575 DNAJC13O75165 2243 aa0.09□□□□□ -2.4
RPL39-201ENST00000361575 FAT2Q9NYQ8 4349 aa0.08□□□□□ -2.4
RPL39-201ENST00000361575 XRN1Q8IZH2 1706 aaKnown RBP0.08□□□□□ -2.4
RPL39-201ENST00000361575 NSD1Q96L73 2696 aaPredicted RBP0.08□□□□□ -2.4
RPL39-201ENST00000361575 KMT2AQ03164 3969 aa0.08□□□□□ -2.4
RPL39-201ENST00000361575 TRBV7-4A0A0J9YYF1 115 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms