RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 IGLV5-45A0A087WSX0 123 aa7.48□□□□□ -1.21
TRAPPC4-201ENST00000359005 TRAV10A0A0B4J240 114 aa7.48□□□□□ -1.21
TRAPPC4-201ENST00000359005 IGHV1-58A0A0C4DH39 117 aa7.48□□□□□ -1.21
TRAPPC4-201ENST00000359005 A0A0J9YWU9 116 aa7.48□□□□□ -1.21
TRAPPC4-201ENST00000359005 TMEM238LA0A1B0GVL6 79 aa7.48□□□□□ -1.21
TRAPPC4-201ENST00000359005 A6NJY4 79 aa7.48□□□□□ -1.21
TRAPPC4-201ENST00000359005 SFTA2Q6UW10 78 aa7.48□□□□□ -1.21
TRAPPC4-201ENST00000359005 SNHG12Q9BXW3 62 aa7.48□□□□□ -1.21
TRAPPC4-201ENST00000359005 IGKV2D-26A0A0A0MRZ7 120 aa7.47□□□□□ -1.21
TRAPPC4-201ENST00000359005 TRAV13-1A0A0B4J241 112 aa7.47□□□□□ -1.21
TRAPPC4-201ENST00000359005 HINT1P49773 126 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC4-201ENST00000359005 TCTAP57738 103 aa7.47□□□□□ -1.21
TRAPPC4-201ENST00000359005 CIRBPQ14011 172 aaKnown RBP7.47□□□□□ -1.21
TRAPPC4-201ENST00000359005 MPV17L2Q567V2 206 aa7.47□□□□□ -1.21
TRAPPC4-201ENST00000359005 C15orf53Q8NAA6 179 aa7.47□□□□□ -1.21
TRAPPC4-201ENST00000359005 COPS9Q8WXC6 57 aa7.47□□□□□ -1.21
TRAPPC4-201ENST00000359005 HIST1H4GQ99525 98 aa7.47□□□□□ -1.21
TRAPPC4-201ENST00000359005 VPS13DQ5THJ4 4388 aa7.46□□□□□ -1.22
TRAPPC4-201ENST00000359005 DEFB131BA0A096LNP1 70 aa7.46□□□□□ -1.22
TRAPPC4-201ENST00000359005 TMEM238C9JI98 176 aa7.46□□□□□ -1.22
TRAPPC4-201ENST00000359005 SRSF9Q13242 221 aaKnown RBP eCLIP7.46□□□□□ -1.22
TRAPPC4-201ENST00000359005 RNASE13Q5GAN3 156 aaKnown RBP7.46□□□□□ -1.22
TRAPPC4-201ENST00000359005 C2orf91Q6ZV80 131 aa7.46□□□□□ -1.22
TRAPPC4-201ENST00000359005 ORAOV1Q8WV07 137 aa7.46□□□□□ -1.22
TRAPPC4-201ENST00000359005 A0A096LPF7 62 aa7.45□□□□□ -1.22
TRAPPC4-201ENST00000359005 PTTG1IPP53801 180 aa7.45□□□□□ -1.22
TRAPPC4-201ENST00000359005 RBX1P62877 108 aa7.45□□□□□ -1.22
TRAPPC4-201ENST00000359005 BVES-AS1Q5T3Y7 98 aa7.45□□□□□ -1.22
TRAPPC4-201ENST00000359005 LINC00242Q5T6M2 205 aa7.45□□□□□ -1.22
TRAPPC4-201ENST00000359005 Q6ZTC4 211 aa7.45□□□□□ -1.22
TRAPPC4-201ENST00000359005 Q6ZVH6 145 aa7.45□□□□□ -1.22
TRAPPC4-201ENST00000359005 LINC01561Q8N1V8 128 aa7.45□□□□□ -1.22
TRAPPC4-201ENST00000359005 FAM104AQ969W3 186 aa7.45□□□□□ -1.22
TRAPPC4-201ENST00000359005 DNAH10Q8IVF4 4471 aa7.45□□□□□ -1.22
TRAPPC4-201ENST00000359005 KMT2AQ03164 3969 aa7.44□□□□□ -1.22
TRAPPC4-201ENST00000359005 BIRC6Q9NR09 4857 aa7.44□□□□□ -1.22
TRAPPC4-201ENST00000359005 IGHV3-30-3P0DP02 117 aa7.44□□□□□ -1.22
TRAPPC4-201ENST00000359005 HERV-K104P63124 156 aa7.44□□□□□ -1.22
TRAPPC4-201ENST00000359005 SPANXB1Q9NS25 103 aaPredicted RBP7.44□□□□□ -1.22
TRAPPC4-201ENST00000359005 CDKN2A-AS1Q9UH64 79 aa7.44□□□□□ -1.22
TRAPPC4-201ENST00000359005 EREGO14944 169 aa7.43□□□□□ -1.22
TRAPPC4-201ENST00000359005 CEND1Q8N111 149 aa7.43□□□□□ -1.22
TRAPPC4-201ENST00000359005 LINC00959A0A1B0GUT2 108 aa7.42□□□□□ -1.22
TRAPPC4-201ENST00000359005 CRPP02741 224 aa7.42□□□□□ -1.22
TRAPPC4-201ENST00000359005 ANGP03950 147 aaKnown RBP7.42□□□□□ -1.22
TRAPPC4-201ENST00000359005 SPINK8P0C7L1 97 aa7.42□□□□□ -1.22
TRAPPC4-201ENST00000359005 NANOS2P60321 138 aaKnown RBP7.42□□□□□ -1.22
TRAPPC4-201ENST00000359005 LYPD5Q6UWN5 251 aa7.42□□□□□ -1.22
TRAPPC4-201ENST00000359005 MAPKAPK5-AS1Q8N8E1 139 aa7.42□□□□□ -1.22
TRAPPC4-201ENST00000359005 TM2D2Q9BX73 214 aa7.42□□□□□ -1.22
TRAPPC4-201ENST00000359005 NDUFA12Q9UI09 145 aa7.42□□□□□ -1.22
TRAPPC4-201ENST00000359005 IGLV4-60A0A075B6I1 120 aa7.41□□□□□ -1.22
TRAPPC4-201ENST00000359005 TRAV8-4A0A0B4J246 113 aa7.41□□□□□ -1.22
TRAPPC4-201ENST00000359005 IGLV5-39A0A0G2JS06 123 aa7.41□□□□□ -1.22
TRAPPC4-201ENST00000359005 LCE6AA0A183 80 aa7.41□□□□□ -1.22
TRAPPC4-201ENST00000359005 TIMM17BO60830 172 aa7.41□□□□□ -1.22
TRAPPC4-201ENST00000359005 SMIM13P0DJ93 91 aa7.41□□□□□ -1.22
TRAPPC4-201ENST00000359005 TP73-AS1Q9UF72 201 aa7.41□□□□□ -1.22
TRAPPC4-201ENST00000359005 IGHV3-64A0A075B6Q5 118 aa7.4□□□□□ -1.22
TRAPPC4-201ENST00000359005 A0A087WZ39 114 aa7.4□□□□□ -1.22
TRAPPC4-201ENST00000359005 IGKV3OR2-268A0A0C4DH90 116 aa7.4□□□□□ -1.22
TRAPPC4-201ENST00000359005 NDUFA1O15239 70 aa7.4□□□□□ -1.22
TRAPPC4-201ENST00000359005 APOMO95445 188 aa7.4□□□□□ -1.22
TRAPPC4-201ENST00000359005 PRSS2P07478 247 aa7.4□□□□□ -1.22
TRAPPC4-201ENST00000359005 RPL24P83731 157 aaKnown RBP7.4□□□□□ -1.22
TRAPPC4-201ENST00000359005 REG3AQ06141 175 aa7.4□□□□□ -1.22
TRAPPC4-201ENST00000359005 A0A0J9YXY3 114 aa7.39□□□□□ -1.23
TRAPPC4-201ENST00000359005 SMIM1B2RUZ4 78 aa7.39□□□□□ -1.23
TRAPPC4-201ENST00000359005 CCL18P55774 89 aa7.39□□□□□ -1.23
TRAPPC4-201ENST00000359005 CD164L2Q6UWJ8 174 aa7.39□□□□□ -1.23
TRAPPC4-201ENST00000359005 LINC00269Q8N2A0 174 aa7.39□□□□□ -1.23
TRAPPC4-201ENST00000359005 TTTY13Q9BZ97 58 aa7.39□□□□□ -1.23
TRAPPC4-201ENST00000359005 FRAS1Q86XX4 4008 aa7.38□□□□□ -1.23
TRAPPC4-201ENST00000359005 TRAV8-3A0A0A6YYJ7 113 aa7.38□□□□□ -1.23
TRAPPC4-201ENST00000359005 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC4-201ENST00000359005 IGHV3OR16-9A0A0B4J2B5 98 aa7.38□□□□□ -1.23
TRAPPC4-201ENST00000359005 COX7A2LO14548 114 aa7.38□□□□□ -1.23
TRAPPC4-201ENST00000359005 IFITM1P13164 125 aa7.38□□□□□ -1.23
TRAPPC4-201ENST00000359005 MALP21145 153 aa7.38□□□□□ -1.23
TRAPPC4-201ENST00000359005 CXCL5P42830 114 aa7.38□□□□□ -1.23
TRAPPC4-201ENST00000359005 COX6A2Q02221 97 aa7.38□□□□□ -1.23
TRAPPC4-201ENST00000359005 MIAQ16674 131 aa7.38□□□□□ -1.23
TRAPPC4-201ENST00000359005 COX7B2Q8TF08 81 aa7.38□□□□□ -1.23
TRAPPC4-201ENST00000359005 K7EP13 123 aa7.37□□□□□ -1.23
TRAPPC4-201ENST00000359005 XCL1P47992 114 aa7.36□□□□□ -1.23
TRAPPC4-201ENST00000359005 TSPEAR-AS2P59090 65 aa7.36□□□□□ -1.23
TRAPPC4-201ENST00000359005 C6orf226Q5I0X4 101 aa7.36□□□□□ -1.23
TRAPPC4-201ENST00000359005 MEIG1Q5JSS6 88 aa7.36□□□□□ -1.23
TRAPPC4-201ENST00000359005 CFAP161Q6P656 301 aa7.36□□□□□ -1.23
TRAPPC4-201ENST00000359005 SPANXDQ9BXN6 97 aa7.36□□□□□ -1.23
TRAPPC4-201ENST00000359005 Q9H8V8 135 aa7.36□□□□□ -1.23
TRAPPC4-201ENST00000359005 SPANXCQ9NY87 97 aa7.36□□□□□ -1.23
TRAPPC4-201ENST00000359005 COX11Q9Y6N1 276 aa7.36□□□□□ -1.23
TRAPPC4-201ENST00000359005 DNAH2Q9P225 4427 aa7.36□□□□□ -1.23
TRAPPC4-201ENST00000359005 LYRM7Q5U5X0 104 aa7.35□□□□□ -1.23
TRAPPC4-201ENST00000359005 Q8IZM0 81 aa7.35□□□□□ -1.23
TRAPPC4-201ENST00000359005 C10orf126Q8N4M7 172 aa7.35□□□□□ -1.23
TRAPPC4-201ENST00000359005 CHCHD10Q8WYQ3 142 aaPredicted RBP7.35□□□□□ -1.23
TRAPPC4-201ENST00000359005 RMI2Q96E14 147 aa7.35□□□□□ -1.23
TRAPPC4-201ENST00000359005 PPDPFQ9H3Y8 114 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms