RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 H7C423 109 aa6.11□□□□□ -1.43
RFX3-202ENST00000358730 LST1O00453 97 aa6.11□□□□□ -1.43
RFX3-202ENST00000358730 LOC100131303A0A0U1RQF7 123 aa6.1□□□□□ -1.43
RFX3-202ENST00000358730 PLAC8L1A1L4L8 177 aa6.1□□□□□ -1.43
RFX3-202ENST00000358730 HIST2H2BCQ6DN03 193 aa6.1□□□□□ -1.43
RFX3-202ENST00000358730 LINC01600Q96MT4 127 aa6.1□□□□□ -1.43
RFX3-202ENST00000358730 F5H768 121 aa6.1□□□□□ -1.43
RFX3-202ENST00000358730 H3BT86 120 aa6.1□□□□□ -1.43
RFX3-202ENST00000358730 CMC4P56277 68 aaPredicted RBP6.09□□□□□ -1.43
RFX3-202ENST00000358730 SOSTDC1Q6X4U4 206 aa6.09□□□□□ -1.43
RFX3-202ENST00000358730 COPS9Q8WXC6 57 aa6.09□□□□□ -1.43
RFX3-202ENST00000358730 TRAV8-4A0A0B4J246 113 aa6.09□□□□□ -1.44
RFX3-202ENST00000358730 TRGV4A0A0C4DH28 118 aa6.09□□□□□ -1.44
RFX3-202ENST00000358730 IGLV1-51P01701 117 aa6.09□□□□□ -1.44
RFX3-202ENST00000358730 RNASE1P07998 156 aaKnown RBP6.09□□□□□ -1.44
RFX3-202ENST00000358730 IGKV3OR2-268A0A0C4DH90 116 aa6.08□□□□□ -1.44
RFX3-202ENST00000358730 C19orf73Q9NVV2 129 aa6.08□□□□□ -1.44
RFX3-202ENST00000358730 TENM4Q6N022 2769 aa6.08□□□□□ -1.44
RFX3-202ENST00000358730 TRBV6-4A0A1B0GX49 114 aa6.08□□□□□ -1.44
RFX3-202ENST00000358730 HERV-K104P63124 156 aa6.08□□□□□ -1.44
RFX3-202ENST00000358730 KRTAP1-1Q07627 177 aa6.08□□□□□ -1.44
RFX3-202ENST00000358730 SNCGO76070 127 aa6.07□□□□□ -1.44
RFX3-202ENST00000358730 PLA2G2AP14555 144 aa6.07□□□□□ -1.44
RFX3-202ENST00000358730 GAGE6Q13070 117 aa6.07□□□□□ -1.44
RFX3-202ENST00000358730 FAM110AQ9BQ89 295 aa6.07□□□□□ -1.44
RFX3-202ENST00000358730 C16orf95Q9H693 158 aa6.07□□□□□ -1.44
RFX3-202ENST00000358730 CSNK1G2-AS1Q8NCQ2 148 aa6.07□□□□□ -1.44
RFX3-202ENST00000358730 COX7A2LO14548 114 aa6.06□□□□□ -1.44
RFX3-202ENST00000358730 CITED1Q99966 193 aa6.06□□□□□ -1.44
RFX3-202ENST00000358730 TOMM7Q9P0U1 55 aa6.06□□□□□ -1.44
RFX3-202ENST00000358730 OVOL2Q9BRP0 275 aa6.06□□□□□ -1.44
RFX3-202ENST00000358730 CHCHD5Q9BSY4 110 aa6.06□□□□□ -1.44
RFX3-202ENST00000358730 IGLV4-60A0A075B6I1 120 aa6.05□□□□□ -1.44
RFX3-202ENST00000358730 TRBV6-8A0A0A6YYG3 113 aa6.05□□□□□ -1.44
RFX3-202ENST00000358730 CRLF1O75462 422 aa6.05□□□□□ -1.44
RFX3-202ENST00000358730 COX7B2Q8TF08 81 aa6.05□□□□□ -1.44
RFX3-202ENST00000358730 PDZD2O15018 2839 aa6.05□□□□□ -1.44
RFX3-202ENST00000358730 FHL2Q14192 279 aa6.05□□□□□ -1.44
RFX3-202ENST00000358730 SHISA2Q6UWI4 295 aa6.05□□□□□ -1.44
RFX3-202ENST00000358730 FN1P02751 2386 aaKnown RBP6.04□□□□□ -1.44
RFX3-202ENST00000358730 ITPR2Q14571 2701 aa6.04□□□□□ -1.44
RFX3-202ENST00000358730 GAGE2BQ13066 116 aa6.04□□□□□ -1.44
RFX3-202ENST00000358730 GAGE2EQ4V326 116 aa6.04□□□□□ -1.44
RFX3-202ENST00000358730 MIR7-3HGQ8N6C7 128 aa6.04□□□□□ -1.44
RFX3-202ENST00000358730 C15orf53Q8NAA6 179 aa6.04□□□□□ -1.44
RFX3-202ENST00000358730 ANAPC13Q9BS18 74 aa6.04□□□□□ -1.44
RFX3-202ENST00000358730 GAGE2DQ9UEU5 116 aa6.04□□□□□ -1.44
RFX3-202ENST00000358730 CRPP02741 224 aa6.03□□□□□ -1.44
RFX3-202ENST00000358730 DEFB130BP0DP73 79 aa6.03□□□□□ -1.44
RFX3-202ENST00000358730 DEFB130AP0DP74 79 aa6.03□□□□□ -1.44
RFX3-202ENST00000358730 TRAV26-1A0A087WT03 109 aa6.03□□□□□ -1.44
RFX3-202ENST00000358730 HILS1P60008 231 aa6.03□□□□□ -1.44
RFX3-202ENST00000358730 TTC32Q5I0X7 151 aa6.03□□□□□ -1.44
RFX3-202ENST00000358730 GCN1Q92616 2671 aaKnown RBP6.02□□□□□ -1.45
RFX3-202ENST00000358730 IGHV3OR16-9A0A0B4J2B5 98 aa6.02□□□□□ -1.45
RFX3-202ENST00000358730 FAM240AA0A1B0GVK7 77 aa6.02□□□□□ -1.45
RFX3-202ENST00000358730 PPDPFQ9H3Y8 114 aa6.02□□□□□ -1.45
RFX3-202ENST00000358730 TRAV13-2A0A0B4J235 113 aa6.02□□□□□ -1.45
RFX3-202ENST00000358730 PF4P02776 101 aa6.02□□□□□ -1.45
RFX3-202ENST00000358730 LINC00158P58513 81 aa6.02□□□□□ -1.45
RFX3-202ENST00000358730 DEFB121Q5J5C9 76 aa6.02□□□□□ -1.45
RFX3-202ENST00000358730 SND1-IT1Q9HBX3 110 aa6.02□□□□□ -1.45
RFX3-202ENST00000358730 TRACP01848 142 aa6.01□□□□□ -1.45
RFX3-202ENST00000358730 FAM222AQ5U5X8 452 aa6.01□□□□□ -1.45
RFX3-202ENST00000358730 C5orf38Q86SI9 138 aa6.01□□□□□ -1.45
RFX3-202ENST00000358730 FAM218AQ96MZ4 157 aa6.01□□□□□ -1.45
RFX3-202ENST00000358730 ANK3Q12955 4377 aaKnown RBP6.01□□□□□ -1.45
RFX3-202ENST00000358730 LINC00337Q8N6G1 96 aa6.01□□□□□ -1.45
RFX3-202ENST00000358730 HIVEP2P31629 2446 aa6.01□□□□□ -1.45
RFX3-202ENST00000358730 A0A087WZ39 114 aa6□□□□□ -1.45
RFX3-202ENST00000358730 GYPEP15421 78 aa6□□□□□ -1.45
RFX3-202ENST00000358730 C11orf68Q9H3H3 251 aaKnown RBP6□□□□□ -1.45
RFX3-202ENST00000358730 IGKV2-28A0A075B6P5 120 aa6□□□□□ -1.45
RFX3-202ENST00000358730 IGKV2D-28P01615 120 aa6□□□□□ -1.45
RFX3-202ENST00000358730 LINC00959A0A1B0GUT2 108 aa6□□□□□ -1.45
RFX3-202ENST00000358730 PFN2P35080 140 aa6□□□□□ -1.45
RFX3-202ENST00000358730 NDUFV3P56181 108 aaKnown RBP6□□□□□ -1.45
RFX3-202ENST00000358730 Q6Q795 121 aa6□□□□□ -1.45
RFX3-202ENST00000358730 KIR2DL5BQ8NHK3 375 aa6□□□□□ -1.45
RFX3-202ENST00000358730 UNC79Q9P2D8 2635 aa5.99□□□□□ -1.45
RFX3-202ENST00000358730 BAALC-AS2P0C853 105 aa5.99□□□□□ -1.45
RFX3-202ENST00000358730 RPL28P46779 137 aaKnown RBP5.99□□□□□ -1.45
RFX3-202ENST00000358730 IBA57-AS1B1ANH7 110 aa5.99□□□□□ -1.45
RFX3-202ENST00000358730 XCL1P47992 114 aa5.99□□□□□ -1.45
RFX3-202ENST00000358730 CCL18P55774 89 aa5.99□□□□□ -1.45
RFX3-202ENST00000358730 MRPL23Q16540 153 aaKnown RBP5.99□□□□□ -1.45
RFX3-202ENST00000358730 CLPSL2Q6UWE3 100 aa5.99□□□□□ -1.45
RFX3-202ENST00000358730 KRTAP10-3P60369 221 aa5.98□□□□□ -1.45
RFX3-202ENST00000358730 LINC00482Q8N8I6 264 aa5.98□□□□□ -1.45
RFX3-202ENST00000358730 SMR3AQ99954 134 aa5.98□□□□□ -1.45
RFX3-202ENST00000358730 Q9HAA7 133 aa5.98□□□□□ -1.45
RFX3-202ENST00000358730 NBEAL2Q6ZNJ1 2754 aa5.98□□□□□ -1.45
RFX3-202ENST00000358730 HELZ2Q9BYK8 2649 aaKnown RBP5.98□□□□□ -1.45
RFX3-202ENST00000358730 FASNP49327 2511 aaKnown RBP5.98□□□□□ -1.45
RFX3-202ENST00000358730 A0A096LPF7 62 aa5.98□□□□□ -1.45
RFX3-202ENST00000358730 NHLRC4P0CG21 123 aaPredicted RBP5.98□□□□□ -1.45
RFX3-202ENST00000358730 LINC00612Q8N6U2 182 aa5.98□□□□□ -1.45
RFX3-202ENST00000358730 SMIM11BQ8TCY0 68 aa5.97□□□□□ -1.45
RFX3-202ENST00000358730 X6R8D5 127 aa5.97□□□□□ -1.45
RFX3-202ENST00000358730 PAX4O43316 350 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms