RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 GAGE12FP0CL80 117 aa4.26□□□□□ -1.73
CLCN3-201ENST00000347613 GAGE12GP0CL81 117 aa4.26□□□□□ -1.73
CLCN3-201ENST00000347613 GAGE12IP0CL82 117 aa4.26□□□□□ -1.73
CLCN3-201ENST00000347613 IGLV4-60A0A075B6I1 120 aa4.26□□□□□ -1.73
CLCN3-201ENST00000347613 BAHCC1Q9P281 2608 aa4.26□□□□□ -1.73
CLCN3-201ENST00000347613 DNAH3Q8TD57 4116 aa4.25□□□□□ -1.73
CLCN3-201ENST00000347613 IGLV5-45A0A087WSX0 123 aa4.25□□□□□ -1.73
CLCN3-201ENST00000347613 SMIM1B2RUZ4 78 aa4.25□□□□□ -1.73
CLCN3-201ENST00000347613 CRLF1O75462 422 aa4.25□□□□□ -1.73
CLCN3-201ENST00000347613 SCGB1C2P0DMR2 95 aa4.25□□□□□ -1.73
CLCN3-201ENST00000347613 ZFAND6Q6FIF0 208 aa4.25□□□□□ -1.73
CLCN3-201ENST00000347613 Q8N3U1 123 aa4.25□□□□□ -1.73
CLCN3-201ENST00000347613 A0A0B4J2C4 111 aa4.25□□□□□ -1.73
CLCN3-201ENST00000347613 SMIM20Q8N5G0 67 aa4.25□□□□□ -1.73
CLCN3-201ENST00000347613 CDC42SE2Q9NRR3 84 aa4.25□□□□□ -1.73
CLCN3-201ENST00000347613 PIK3CD-AS1Q5SR53 167 aa4.25□□□□□ -1.73
CLCN3-201ENST00000347613 Q9H8V8 135 aa4.25□□□□□ -1.73
CLCN3-201ENST00000347613 ERG28Q9UKR5 140 aa4.25□□□□□ -1.73
CLCN3-201ENST00000347613 IGLV5-39A0A0G2JS06 123 aa4.24□□□□□ -1.73
CLCN3-201ENST00000347613 SLC25A20O43772 301 aa4.24□□□□□ -1.73
CLCN3-201ENST00000347613 MIAQ16674 131 aa4.24□□□□□ -1.73
CLCN3-201ENST00000347613 DGAT2L7PQ6IED9 249 aa4.24□□□□□ -1.73
CLCN3-201ENST00000347613 TEN1Q86WV5 123 aa4.24□□□□□ -1.73
CLCN3-201ENST00000347613 C22orf24Q9Y442 160 aa4.24□□□□□ -1.73
CLCN3-201ENST00000347613 H7C423 109 aa4.24□□□□□ -1.73
CLCN3-201ENST00000347613 K7EQD1 137 aa4.24□□□□□ -1.73
CLCN3-201ENST00000347613 SPANXDQ9BXN6 97 aa4.24□□□□□ -1.73
CLCN3-201ENST00000347613 SPANXA1Q9NS26 97 aa4.24□□□□□ -1.73
CLCN3-201ENST00000347613 SPANXCQ9NY87 97 aa4.24□□□□□ -1.73
CLCN3-201ENST00000347613 DNAH10Q8IVF4 4471 aa4.23□□□□□ -1.73
CLCN3-201ENST00000347613 IGKV3OR2-268A0A0C4DH90 116 aa4.23□□□□□ -1.73
CLCN3-201ENST00000347613 IGLV1-51P01701 117 aa4.23□□□□□ -1.73
CLCN3-201ENST00000347613 NTN5Q8WTR8 489 aaPredicted RBP4.23□□□□□ -1.73
CLCN3-201ENST00000347613 DNAJC30Q96LL9 226 aa4.23□□□□□ -1.73
CLCN3-201ENST00000347613 FAM218AQ96MZ4 157 aa4.23□□□□□ -1.73
CLCN3-201ENST00000347613 ICOSQ9Y6W8 199 aa4.23□□□□□ -1.73
CLCN3-201ENST00000347613 DEFB4AO15263 64 aa4.23□□□□□ -1.73
CLCN3-201ENST00000347613 FHL2Q14192 279 aa4.23□□□□□ -1.73
CLCN3-201ENST00000347613 LINC00482Q8N8I6 264 aa4.23□□□□□ -1.73
CLCN3-201ENST00000347613 DNAH1Q9P2D7 4330 aa4.22□□□□□ -1.73
CLCN3-201ENST00000347613 A0A096LPF7 62 aa4.22□□□□□ -1.73
CLCN3-201ENST00000347613 NDUFA1O15239 70 aa4.22□□□□□ -1.73
CLCN3-201ENST00000347613 LINC01620Q4KN68 170 aa4.22□□□□□ -1.73
CLCN3-201ENST00000347613 LINC00308Q8TCZ7 52 aa4.22□□□□□ -1.73
CLCN3-201ENST00000347613 TRBV30A0A0K0K1B3 111 aa4.22□□□□□ -1.73
CLCN3-201ENST00000347613 GAGE6Q13070 117 aa4.22□□□□□ -1.73
CLCN3-201ENST00000347613 Q1RN00 199 aa4.22□□□□□ -1.73
CLCN3-201ENST00000347613 C9orf129Q5T035 196 aaKnown RBP4.22□□□□□ -1.73
CLCN3-201ENST00000347613 TRAV4A0A0B4J268 109 aa4.22□□□□□ -1.73
CLCN3-201ENST00000347613 ATP6V0E2Q8NHE4 81 aa4.22□□□□□ -1.73
CLCN3-201ENST00000347613 DNAH7Q8WXX0 4024 aa4.21□□□□□ -1.73
CLCN3-201ENST00000347613 SMIM9A6NGZ8 99 aa4.21□□□□□ -1.73
CLCN3-201ENST00000347613 RPL13AP40429 203 aaKnown RBP4.21□□□□□ -1.73
CLCN3-201ENST00000347613 TMEM86BQ8N661 226 aa4.21□□□□□ -1.73
CLCN3-201ENST00000347613 TRBV20-1A0A075B6N2 111 aa4.21□□□□□ -1.74
CLCN3-201ENST00000347613 TRAV8-4A0A0B4J246 113 aa4.21□□□□□ -1.74
CLCN3-201ENST00000347613 RNASE1P07998 156 aaKnown RBP4.21□□□□□ -1.74
CLCN3-201ENST00000347613 DAZ2Q13117 558 aaKnown RBP4.21□□□□□ -1.74
CLCN3-201ENST00000347613 FAM19A3Q7Z5A8 133 aa4.21□□□□□ -1.74
CLCN3-201ENST00000347613 PPDPFLQ8WWR9 84 aa4.21□□□□□ -1.74
CLCN3-201ENST00000347613 IGKV2-28A0A075B6P5 120 aa4.21□□□□□ -1.74
CLCN3-201ENST00000347613 CYSRT1A8MQ03 144 aa4.21□□□□□ -1.74
CLCN3-201ENST00000347613 IGKV2D-28P01615 120 aa4.21□□□□□ -1.74
CLCN3-201ENST00000347613 DEFB130BP0DP73 79 aa4.21□□□□□ -1.74
CLCN3-201ENST00000347613 DEFB130AP0DP74 79 aa4.21□□□□□ -1.74
CLCN3-201ENST00000347613 TRGV2A0A075B6R0 118 aa4.2□□□□□ -1.74
CLCN3-201ENST00000347613 C16orf95Q9H693 158 aa4.2□□□□□ -1.74
CLCN3-201ENST00000347613 RPL36AP83881 106 aaKnown RBP4.2□□□□□ -1.74
CLCN3-201ENST00000347613 CLPSL2Q6UWE3 100 aa4.2□□□□□ -1.74
CLCN3-201ENST00000347613 FAM19A1Q7Z5A9 133 aa4.2□□□□□ -1.74
CLCN3-201ENST00000347613 RPL36ALQ969Q0 106 aaKnown RBP4.2□□□□□ -1.74
CLCN3-201ENST00000347613 C6orf226Q5I0X4 101 aa4.2□□□□□ -1.74
CLCN3-201ENST00000347613 LINC00337Q8N6G1 96 aa4.2□□□□□ -1.74
CLCN3-201ENST00000347613 OVOL2Q9BRP0 275 aa4.2□□□□□ -1.74
CLCN3-201ENST00000347613 X6R8D5 127 aa4.2□□□□□ -1.74
CLCN3-201ENST00000347613 DNAH9Q9NYC9 4486 aa4.19□□□□□ -1.74
CLCN3-201ENST00000347613 COL7A1Q02388 2944 aa4.19□□□□□ -1.74
CLCN3-201ENST00000347613 STAB1Q9NY15 2570 aa4.19□□□□□ -1.74
CLCN3-201ENST00000347613 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.19□□□□□ -1.74
CLCN3-201ENST00000347613 CKS1BP61024 79 aa4.19□□□□□ -1.74
CLCN3-201ENST00000347613 C11orf68Q9H3H3 251 aaKnown RBP4.19□□□□□ -1.74
CLCN3-201ENST00000347613 LST1O00453 97 aa4.19□□□□□ -1.74
CLCN3-201ENST00000347613 NHLRC4P0CG21 123 aaPredicted RBP4.19□□□□□ -1.74
CLCN3-201ENST00000347613 LINC00336Q6ZUF6 198 aa4.19□□□□□ -1.74
CLCN3-201ENST00000347613 DAZ4Q86SG3 579 aaKnown RBP4.19□□□□□ -1.74
CLCN3-201ENST00000347613 C5orf38Q86SI9 138 aa4.19□□□□□ -1.74
CLCN3-201ENST00000347613 Q8NDZ9 215 aa4.19□□□□□ -1.74
CLCN3-201ENST00000347613 DAZ3Q9NR90 486 aaKnown RBP4.19□□□□□ -1.74
CLCN3-201ENST00000347613 IGHV3OR16-9A0A0B4J2B5 98 aa4.19□□□□□ -1.74
CLCN3-201ENST00000347613 TRBV10-2A0A0K0K1G8 114 aa4.19□□□□□ -1.74
CLCN3-201ENST00000347613 HERVK_113P63121 156 aa4.19□□□□□ -1.74
CLCN3-201ENST00000347613 PRR3P79522 188 aaKnown RBP4.19□□□□□ -1.74
CLCN3-201ENST00000347613 PRIMA1Q86XR5 153 aa4.19□□□□□ -1.74
CLCN3-201ENST00000347613 HILS1P60008 231 aa4.18□□□□□ -1.74
CLCN3-201ENST00000347613 ATXN8Q156A1 80 aa4.18□□□□□ -1.74
CLCN3-201ENST00000347613 C2orf82Q6UX34 121 aa4.18□□□□□ -1.74
CLCN3-201ENST00000347613 TRBV6-8A0A0A6YYG3 113 aa4.18□□□□□ -1.74
CLCN3-201ENST00000347613 TRBV10-1A0A0K0K1A3 114 aa4.18□□□□□ -1.74
CLCN3-201ENST00000347613 C16orf74Q96GX8 76 aa4.18□□□□□ -1.74
CLCN3-201ENST00000347613 Q9HAA7 133 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms