RNA–Protein interactions for RNA: ENST00000347140.7

R3HDM2-201, Transcript of R3H domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene R3HDM2, Length 4,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-201ENST00000347140 BEAN1Q3B7T3 259 aa11.17□□□□□ -0.62
R3HDM2-201ENST00000347140 FAM218AQ96MZ4 157 aa11.17□□□□□ -0.62
R3HDM2-201ENST00000347140 RPL18AQ02543 176 aaKnown RBP11.17□□□□□ -0.62
R3HDM2-201ENST00000347140 SMIM11BQ8TCY0 68 aa11.17□□□□□ -0.62
R3HDM2-201ENST00000347140 NCOR2Q9Y618 2525 aa11.16□□□□□ -0.62
R3HDM2-201ENST00000347140 C18orf65Q6ZTR6 163 aa11.16□□□□□ -0.62
R3HDM2-201ENST00000347140 C11orf72Q8NBR9 251 aa11.15□□□□□ -0.62
R3HDM2-201ENST00000347140 PRB1P04280 392 aa11.15□□□□□ -0.62
R3HDM2-201ENST00000347140 MYO9AB2RTY4 2548 aa11.15□□□□□ -0.62
R3HDM2-201ENST00000347140 NCR3O14931 201 aa11.15□□□□□ -0.63
R3HDM2-201ENST00000347140 CSDC2Q9Y534 153 aaKnown RBP11.15□□□□□ -0.63
R3HDM2-201ENST00000347140 F5H768 121 aa11.14□□□□□ -0.63
R3HDM2-201ENST00000347140 LRRC75A-AS1Q8N1F1 130 aa11.14□□□□□ -0.63
R3HDM2-201ENST00000347140 RPL35AP18077 110 aaKnown RBP11.14□□□□□ -0.63
R3HDM2-201ENST00000347140 USP9YO00507 2555 aaPredicted RBP11.14□□□□□ -0.63
R3HDM2-201ENST00000347140 SLPIP03973 132 aa11.14□□□□□ -0.63
R3HDM2-201ENST00000347140 NRGNQ92686 78 aa11.14□□□□□ -0.63
R3HDM2-201ENST00000347140 A0A087WYN8 130 aa11.13□□□□□ -0.63
R3HDM2-201ENST00000347140 LOC107984640A0A0U1RRK4 108 aa11.13□□□□□ -0.63
R3HDM2-201ENST00000347140 DEFB114Q30KQ6 69 aa11.13□□□□□ -0.63
R3HDM2-201ENST00000347140 UBL5Q9BZL1 73 aa11.13□□□□□ -0.63
R3HDM2-201ENST00000347140 ZNF702PQ9H963 129 aa11.13□□□□□ -0.63
R3HDM2-201ENST00000347140 ATMQ13315 3056 aa11.13□□□□□ -0.63
R3HDM2-201ENST00000347140 Q6JHZ5 121 aa11.12□□□□□ -0.63
R3HDM2-201ENST00000347140 LINC00337Q8N6G1 96 aa11.12□□□□□ -0.63
R3HDM2-201ENST00000347140 SERP2Q8N6R1 65 aa11.12□□□□□ -0.63
R3HDM2-201ENST00000347140 PRB2P02812 416 aaPredicted RBP11.12□□□□□ -0.63
R3HDM2-201ENST00000347140 ACACBO00763 2458 aa11.12□□□□□ -0.63
R3HDM2-201ENST00000347140 DMXL1Q9Y485 3027 aa11.12□□□□□ -0.63
R3HDM2-201ENST00000347140 ABCA2Q9BZC7 2435 aa11.11□□□□□ -0.63
R3HDM2-201ENST00000347140 CCL18P55774 89 aa11.11□□□□□ -0.63
R3HDM2-201ENST00000347140 SS18Q15532 418 aa11.11□□□□□ -0.63
R3HDM2-201ENST00000347140 IBA57-AS1B1ANH7 110 aa11.11□□□□□ -0.63
R3HDM2-201ENST00000347140 C4orf3Q8WVX3 66 aa11.11□□□□□ -0.63
R3HDM2-201ENST00000347140 USP17L23D6RBM5 183 aa11.1□□□□□ -0.63
R3HDM2-201ENST00000347140 XCL1P47992 114 aa11.1□□□□□ -0.63
R3HDM2-201ENST00000347140 FAM208BQ5VWN6 2430 aa11.09□□□□□ -0.63
R3HDM2-201ENST00000347140 A0A087WVE0 104 aa11.09□□□□□ -0.63
R3HDM2-201ENST00000347140 NTM-AS1Q6ZSK4 140 aa11.09□□□□□ -0.63
R3HDM2-201ENST00000347140 USP9XQ93008 2570 aaPredicted RBP11.08□□□□□ -0.63
R3HDM2-201ENST00000347140 Q6YL49 198 aa11.08□□□□□ -0.64
R3HDM2-201ENST00000347140 SPTSSBQ8NFR3 76 aa11.08□□□□□ -0.64
R3HDM2-201ENST00000347140 JMJD7-PLA2G4BH0Y9G9 81 aa11.08□□□□□ -0.64
R3HDM2-201ENST00000347140 LINC00846Q9NV44 126 aa11.08□□□□□ -0.64
R3HDM2-201ENST00000347140 CRYGAP11844 174 aa11.08□□□□□ -0.64
R3HDM2-201ENST00000347140 CMC4P56277 68 aaPredicted RBP11.07□□□□□ -0.64
R3HDM2-201ENST00000347140 FAM19A5Q7Z5A7 132 aaPredicted RBP11.07□□□□□ -0.64
R3HDM2-201ENST00000347140 C16orf74Q96GX8 76 aa11.07□□□□□ -0.64
R3HDM2-201ENST00000347140 DEFB130BP0DP73 79 aa11.07□□□□□ -0.64
R3HDM2-201ENST00000347140 DEFB130AP0DP74 79 aa11.07□□□□□ -0.64
R3HDM2-201ENST00000347140 LOC100131303A0A0U1RQF7 123 aa11.06□□□□□ -0.64
R3HDM2-201ENST00000347140 CLPSL2Q6UWE3 100 aa11.06□□□□□ -0.64
R3HDM2-201ENST00000347140 C1orf158Q8N1D5 194 aa11.06□□□□□ -0.64
R3HDM2-201ENST00000347140 CHD8Q9HCK8 2581 aa11.06□□□□□ -0.64
R3HDM2-201ENST00000347140 TRAV25A0A0B4J276 109 aa11.05□□□□□ -0.64
R3HDM2-201ENST00000347140 LAMA5O15230 3695 aa11.05□□□□□ -0.64
R3HDM2-201ENST00000347140 ODF3L2Q3SX64 289 aa11.05□□□□□ -0.64
R3HDM2-201ENST00000347140 TRAV23DV6A0A075B6W5 121 aa11.05□□□□□ -0.64
R3HDM2-201ENST00000347140 Q96MF0 132 aa11.05□□□□□ -0.64
R3HDM2-201ENST00000347140 PTPN13Q12923 2485 aa11.05□□□□□ -0.64
R3HDM2-201ENST00000347140 CSMD1Q96PZ7 3565 aa11.04□□□□□ -0.64
R3HDM2-201ENST00000347140 SMIM9A6NGZ8 99 aa11.04□□□□□ -0.64
R3HDM2-201ENST00000347140 A8MTW9 85 aa11.04□□□□□ -0.64
R3HDM2-201ENST00000347140 SPENQ96T58 3664 aaKnown RBP11.04□□□□□ -0.64
R3HDM2-201ENST00000347140 C1orf195Q5TG92 126 aa11.03□□□□□ -0.64
R3HDM2-201ENST00000347140 TMEM256-PLSCR3K7ERE1 68 aa11.03□□□□□ -0.64
R3HDM2-201ENST00000347140 DAD1P61803 113 aa11.03□□□□□ -0.64
R3HDM2-201ENST00000347140 FAM19A3Q7Z5A8 133 aa11.03□□□□□ -0.64
R3HDM2-201ENST00000347140 IGKV2-28A0A075B6P5 120 aa11.03□□□□□ -0.64
R3HDM2-201ENST00000347140 IGKV2D-28P01615 120 aa11.03□□□□□ -0.64
R3HDM2-201ENST00000347140 TRBV6-8A0A0A6YYG3 113 aa11.02□□□□□ -0.64
R3HDM2-201ENST00000347140 TRBV6-4A0A1B0GX49 114 aa11.02□□□□□ -0.65
R3HDM2-201ENST00000347140 CCL24O00175 119 aa11.02□□□□□ -0.65
R3HDM2-201ENST00000347140 WFDC11Q8NEX6 87 aa11.02□□□□□ -0.65
R3HDM2-201ENST00000347140 CACNA1AO00555 2505 aa11.02□□□□□ -0.65
R3HDM2-201ENST00000347140 HRNRQ86YZ3 2850 aaPredicted RBP11.01□□□□□ -0.65
R3HDM2-201ENST00000347140 ATP5EP2Q5VTU8 51 aa11.01□□□□□ -0.65
R3HDM2-201ENST00000347140 DCHS2Q6V1P9 2916 aa11.01□□□□□ -0.65
R3HDM2-201ENST00000347140 DSCR8Q96T75 97 aa11.01□□□□□ -0.65
R3HDM2-201ENST00000347140 CCKP06307 115 aa11□□□□□ -0.65
R3HDM2-201ENST00000347140 IGLV4-60A0A075B6I1 120 aa11□□□□□ -0.65
R3HDM2-201ENST00000347140 ENHOQ6UWT2 76 aa11□□□□□ -0.65
R3HDM2-201ENST00000347140 RETNQ9HD89 108 aa11□□□□□ -0.65
R3HDM2-201ENST00000347140 MYO18BQ8IUG5 2567 aa11□□□□□ -0.65
R3HDM2-201ENST00000347140 SPTBN4Q9H254 2564 aa10.99□□□□□ -0.65
R3HDM2-201ENST00000347140 WFDC9Q8NEX5 89 aa10.99□□□□□ -0.65
R3HDM2-201ENST00000347140 A0A087WZ39 114 aa10.99□□□□□ -0.65
R3HDM2-201ENST00000347140 MPLKIPQ8TAP9 179 aa10.99□□□□□ -0.65
R3HDM2-201ENST00000347140 MAP1AP78559 2803 aaPredicted RBP10.98□□□□□ -0.65
R3HDM2-201ENST00000347140 A0A096LPF7 62 aa10.98□□□□□ -0.65
R3HDM2-201ENST00000347140 C20orf197Q8N268 126 aa10.98□□□□□ -0.65
R3HDM2-201ENST00000347140 GYPEP15421 78 aa10.97□□□□□ -0.65
R3HDM2-201ENST00000347140 RPS28P62857 69 aaKnown RBP10.97□□□□□ -0.65
R3HDM2-201ENST00000347140 UPK3BQ9BT76 320 aa10.97□□□□□ -0.65
R3HDM2-201ENST00000347140 LINC00959A0A1B0GUT2 108 aa10.97□□□□□ -0.65
R3HDM2-201ENST00000347140 TLN2Q9Y4G6 2542 aa10.97□□□□□ -0.65
R3HDM2-201ENST00000347140 NAV2Q8IVL1 2488 aa10.96□□□□□ -0.65
R3HDM2-201ENST00000347140 IGHV3OR16-9A0A0B4J2B5 98 aa10.96□□□□□ -0.66
R3HDM2-201ENST00000347140 C9orf129Q5T035 196 aaKnown RBP10.95□□□□□ -0.66
R3HDM2-201ENST00000347140 C2orf48Q96LS8 159 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms