RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 CDKN2A-AS1Q9UH64 79 aa11.89□□□□□ -0.51
SMARCA4-201ENST00000344626 UBE2D3P61077 147 aa11.88□□□□□ -0.51
SMARCA4-201ENST00000344626 UBE2D2P62837 147 aa11.88□□□□□ -0.51
SMARCA4-201ENST00000344626 CHCHD7Q9BUK0 85 aa11.88□□□□□ -0.51
SMARCA4-201ENST00000344626 C1orf158Q8N1D5 194 aa11.88□□□□□ -0.51
SMARCA4-201ENST00000344626 CITED1Q99966 193 aa11.88□□□□□ -0.51
SMARCA4-201ENST00000344626 TSHBP01222 138 aa11.87□□□□□ -0.51
SMARCA4-201ENST00000344626 AKAP13Q12802 2813 aa11.87□□□□□ -0.51
SMARCA4-201ENST00000344626 IBA57-AS1B1ANH7 110 aa11.87□□□□□ -0.51
SMARCA4-201ENST00000344626 COX7BP24311 80 aa11.87□□□□□ -0.51
SMARCA4-201ENST00000344626 FHL3Q13643 280 aa11.86□□□□□ -0.51
SMARCA4-201ENST00000344626 A0A087WZ39 114 aa11.86□□□□□ -0.51
SMARCA4-201ENST00000344626 CNFNQ9BYD5 112 aa11.86□□□□□ -0.51
SMARCA4-201ENST00000344626 MRPS36P82909 103 aaKnown RBP11.85□□□□□ -0.51
SMARCA4-201ENST00000344626 SPANXCQ9NY87 97 aa11.85□□□□□ -0.51
SMARCA4-201ENST00000344626 ZNF22P17026 224 aaPredicted RBP11.85□□□□□ -0.51
SMARCA4-201ENST00000344626 AGRNO00468 2067 aa11.84□□□□□ -0.51
SMARCA4-201ENST00000344626 hADV29S1A0JD25 119 aa11.84□□□□□ -0.51
SMARCA4-201ENST00000344626 MUC4Q99102 2169 aa11.84□□□□□ -0.51
SMARCA4-201ENST00000344626 NRACQ8N912 160 aa11.84□□□□□ -0.51
SMARCA4-201ENST00000344626 POLR2KP53803 58 aaKnown RBP11.84□□□□□ -0.51
SMARCA4-201ENST00000344626 LINC00959A0A1B0GUT2 108 aa11.83□□□□□ -0.51
SMARCA4-201ENST00000344626 TMEM223A0PJW6 202 aa11.83□□□□□ -0.51
SMARCA4-201ENST00000344626 IGLV4-69A0A075B6H9 119 aa11.83□□□□□ -0.52
SMARCA4-201ENST00000344626 A0A0J9YXY3 114 aa11.83□□□□□ -0.52
SMARCA4-201ENST00000344626 BEAN1Q3B7T3 259 aa11.83□□□□□ -0.52
SMARCA4-201ENST00000344626 RNASE8Q8TDE3 154 aaKnown RBP11.83□□□□□ -0.52
SMARCA4-201ENST00000344626 H3BMG7 143 aa11.82□□□□□ -0.52
SMARCA4-201ENST00000344626 TTTY13Q9BZ97 58 aa11.82□□□□□ -0.52
SMARCA4-201ENST00000344626 UBE2D4Q9Y2X8 147 aa11.82□□□□□ -0.52
SMARCA4-201ENST00000344626 C9orf153Q5TBE3 101 aa11.82□□□□□ -0.52
SMARCA4-201ENST00000344626 NDUFB1O75438 58 aa11.82□□□□□ -0.52
SMARCA4-201ENST00000344626 FSHBP01225 129 aa11.82□□□□□ -0.52
SMARCA4-201ENST00000344626 ANAPC13Q9BS18 74 aa11.82□□□□□ -0.52
SMARCA4-201ENST00000344626 SZT2Q5T011 3432 aa11.82□□□□□ -0.52
SMARCA4-201ENST00000344626 NBEAL1Q6ZS30 2694 aa11.82□□□□□ -0.52
SMARCA4-201ENST00000344626 LINC00474Q9P2X8 69 aa11.81□□□□□ -0.52
SMARCA4-201ENST00000344626 SPANXDQ9BXN6 97 aa11.81□□□□□ -0.52
SMARCA4-201ENST00000344626 SPATA3Q8NHX4 192 aa11.81□□□□□ -0.52
SMARCA4-201ENST00000344626 SBSPONQ8IVN8 264 aa11.8□□□□□ -0.52
SMARCA4-201ENST00000344626 LOC107984640A0A0U1RRK4 108 aa11.8□□□□□ -0.52
SMARCA4-201ENST00000344626 HIGD2AQ9BW72 106 aa11.8□□□□□ -0.52
SMARCA4-201ENST00000344626 FAM19A1Q7Z5A9 133 aa11.8□□□□□ -0.52
SMARCA4-201ENST00000344626 ETDBQ3ZM63 59 aa11.79□□□□□ -0.52
SMARCA4-201ENST00000344626 CDH23Q9H251 3354 aa11.79□□□□□ -0.52
SMARCA4-201ENST00000344626 COX8CQ7Z4L0 72 aa11.79□□□□□ -0.52
SMARCA4-201ENST00000344626 FHL2Q14192 279 aa11.79□□□□□ -0.52
SMARCA4-201ENST00000344626 PTH2Q96A98 100 aa11.79□□□□□ -0.52
SMARCA4-201ENST00000344626 FAM19A5Q7Z5A7 132 aaPredicted RBP11.79□□□□□ -0.52
SMARCA4-201ENST00000344626 LINC00526Q96FQ7 95 aa11.79□□□□□ -0.52
SMARCA4-201ENST00000344626 JMJD7-PLA2G4BH0Y9G9 81 aa11.78□□□□□ -0.52
SMARCA4-201ENST00000344626 NTN5Q8WTR8 489 aaPredicted RBP11.78□□□□□ -0.52
SMARCA4-201ENST00000344626 TRACP01848 142 aa11.78□□□□□ -0.52
SMARCA4-201ENST00000344626 C1orf134Q5TEV5 83 aa11.78□□□□□ -0.52
SMARCA4-201ENST00000344626 NDUFS5O43920 106 aa11.77□□□□□ -0.53
SMARCA4-201ENST00000344626 PCP4P48539 62 aa11.77□□□□□ -0.53
SMARCA4-201ENST00000344626 SPANXB1Q9NS25 103 aaPredicted RBP11.77□□□□□ -0.53
SMARCA4-201ENST00000344626 FXYD2P54710 66 aa11.77□□□□□ -0.53
SMARCA4-201ENST00000344626 CFAP54Q96N23 3096 aa11.77□□□□□ -0.53
SMARCA4-201ENST00000344626 ANKRD29Q8N6D5 301 aa11.76□□□□□ -0.53
SMARCA4-201ENST00000344626 NOTCH1P46531 2555 aa11.76□□□□□ -0.53
SMARCA4-201ENST00000344626 TMEM256-PLSCR3K7ERE1 68 aa11.76□□□□□ -0.53
SMARCA4-201ENST00000344626 CDC42SE2Q9NRR3 84 aa11.76□□□□□ -0.53
SMARCA4-201ENST00000344626 K7EP13 123 aa11.75□□□□□ -0.53
SMARCA4-201ENST00000344626 MUC7Q8TAX7 377 aa11.75□□□□□ -0.53
SMARCA4-201ENST00000344626 XAGE1AQ9HD64 81 aa11.75□□□□□ -0.53
SMARCA4-201ENST00000344626 MDFIQ99750 246 aa11.75□□□□□ -0.53
SMARCA4-201ENST00000344626 A0A096LNT2 108 aa11.74□□□□□ -0.53
SMARCA4-201ENST00000344626 ACYP1P07311 99 aa11.74□□□□□ -0.53
SMARCA4-201ENST00000344626 LINC01620Q4KN68 170 aa11.74□□□□□ -0.53
SMARCA4-201ENST00000344626 UBE2D1P51668 147 aa11.73□□□□□ -0.53
SMARCA4-201ENST00000344626 WWC2-AS2Q96NR7 200 aa11.73□□□□□ -0.53
SMARCA4-201ENST00000344626 A0A0B4J2C4 111 aa11.72□□□□□ -0.53
SMARCA4-201ENST00000344626 PDE6GP18545 87 aa11.72□□□□□ -0.53
SMARCA4-201ENST00000344626 NREPQ16612 68 aa11.72□□□□□ -0.53
SMARCA4-201ENST00000344626 COX17Q14061 63 aa11.72□□□□□ -0.53
SMARCA4-201ENST00000344626 RBM3P98179 157 aaKnown RBP11.71□□□□□ -0.53
SMARCA4-201ENST00000344626 Q8IZM0 81 aa11.71□□□□□ -0.53
SMARCA4-201ENST00000344626 LINC00308Q8TCZ7 52 aa11.71□□□□□ -0.53
SMARCA4-201ENST00000344626 A0A096LNI7 61 aa11.71□□□□□ -0.54
SMARCA4-201ENST00000344626 ZNF706Q9Y5V0 76 aaPredicted RBP11.71□□□□□ -0.54
SMARCA4-201ENST00000344626 COL6A3P12111 3177 aa11.71□□□□□ -0.54
SMARCA4-201ENST00000344626 TIMM17BO60830 172 aa11.7□□□□□ -0.54
SMARCA4-201ENST00000344626 CDPF1Q6NVV7 123 aa11.7□□□□□ -0.54
SMARCA4-201ENST00000344626 M0R378 163 aa11.7□□□□□ -0.54
SMARCA4-201ENST00000344626 WFDC9Q8NEX5 89 aa11.7□□□□□ -0.54
SMARCA4-201ENST00000344626 KRTAP1-3Q8IUG1 177 aa11.69□□□□□ -0.54
SMARCA4-201ENST00000344626 IGLV5-52A0A0A0MRZ9 124 aa11.68□□□□□ -0.54
SMARCA4-201ENST00000344626 LYPD5Q6UWN5 251 aa11.68□□□□□ -0.54
SMARCA4-201ENST00000344626 CLEC2BQ92478 149 aa11.67□□□□□ -0.54
SMARCA4-201ENST00000344626 REV3LO60673 3130 aa11.67□□□□□ -0.54
SMARCA4-201ENST00000344626 H3BT86 120 aa11.67□□□□□ -0.54
SMARCA4-201ENST00000344626 CELA1Q9UNI1 258 aa11.67□□□□□ -0.54
SMARCA4-201ENST00000344626 YPEL4Q96NS1 127 aa11.66□□□□□ -0.54
SMARCA4-201ENST00000344626 TRBV30A0A0K0K1B3 111 aa11.66□□□□□ -0.54
SMARCA4-201ENST00000344626 TRBV10-2A0A0K0K1G8 114 aa11.66□□□□□ -0.54
SMARCA4-201ENST00000344626 CSDC2Q9Y534 153 aaKnown RBP11.66□□□□□ -0.54
SMARCA4-201ENST00000344626 TRAV23DV6A0A075B6W5 121 aa11.65□□□□□ -0.54
SMARCA4-201ENST00000344626 F8WDY8 70 aa11.65□□□□□ -0.54
SMARCA4-201ENST00000344626 GAS8-AS1O95177 125 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms