RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 IGHV3-74A0A0B4J1X5 117 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 TRBV6-4A0A1B0GX49 114 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 FBXL19-AS1Q494R0 122 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 LCTP09848 1927 aa2.76□□□□□ -1.97
SYNE2-202ENST00000344113 C10orf55Q5SWW7 151 aa2.75□□□□□ -1.97
SYNE2-202ENST00000344113 LTBP1Q14766 1721 aa2.75□□□□□ -1.97
SYNE2-202ENST00000344113 LINC00846Q9NV44 126 aa2.75□□□□□ -1.97
SYNE2-202ENST00000344113 UBR3Q6ZT12 1888 aa2.75□□□□□ -1.97
SYNE2-202ENST00000344113 TNRC6BQ9UPQ9 1833 aaKnown RBP2.75□□□□□ -1.97
SYNE2-202ENST00000344113 LINC01548A6NM66 108 aa2.75□□□□□ -1.97
SYNE2-202ENST00000344113 IGKV1D-43A0A0B4J1Z2 117 aa2.75□□□□□ -1.97
SYNE2-202ENST00000344113 IGHV4-28A0A0C4DH34 117 aa2.75□□□□□ -1.97
SYNE2-202ENST00000344113 LINC00482Q8N8I6 264 aa2.75□□□□□ -1.97
SYNE2-202ENST00000344113 CCL18P55774 89 aa2.75□□□□□ -1.97
SYNE2-202ENST00000344113 IGHV3-35A0A0C4DH35 117 aa2.75□□□□□ -1.97
SYNE2-202ENST00000344113 C10orf25Q5T742 122 aa2.75□□□□□ -1.97
SYNE2-202ENST00000344113 ITGB4P16144 1822 aa2.75□□□□□ -1.97
SYNE2-202ENST00000344113 I3L2K1 104 aa2.75□□□□□ -1.97
SYNE2-202ENST00000344113 CRIP3Q6Q6R5 217 aa2.75□□□□□ -1.97
SYNE2-202ENST00000344113 MDS2Q8NDY4 140 aa2.75□□□□□ -1.97
SYNE2-202ENST00000344113 PRSS33Q8NF86 280 aa2.75□□□□□ -1.97
SYNE2-202ENST00000344113 C16orf95Q9H693 158 aa2.75□□□□□ -1.97
SYNE2-202ENST00000344113 RPL39LQ96EH5 51 aaKnown RBP2.75□□□□□ -1.97
SYNE2-202ENST00000344113 IGKV1D-17A0A075B6S4 117 aa2.75□□□□□ -1.97
SYNE2-202ENST00000344113 M0QY20 66 aa2.75□□□□□ -1.97
SYNE2-202ENST00000344113 IGKV1-17P01599 117 aa2.75□□□□□ -1.97
SYNE2-202ENST00000344113 FASNP49327 2511 aaKnown RBP2.75□□□□□ -1.97
SYNE2-202ENST00000344113 C17orf82Q86X59 251 aaPredicted RBP2.75□□□□□ -1.97
SYNE2-202ENST00000344113 IGHV4-38-2P0DP08 117 aa2.75□□□□□ -1.97
SYNE2-202ENST00000344113 FLVCR1-AS1Q8TAF5 88 aa2.75□□□□□ -1.97
SYNE2-202ENST00000344113 EFNA2O43921 213 aa2.74□□□□□ -1.97
SYNE2-202ENST00000344113 ZFAND2AQ8N6M9 145 aa2.74□□□□□ -1.97
SYNE2-202ENST00000344113 TRAV22A0A0B4J277 110 aa2.74□□□□□ -1.97
SYNE2-202ENST00000344113 LAMA2P24043 3122 aaKnown RBP2.74□□□□□ -1.97
SYNE2-202ENST00000344113 IGLV4-3A0A075B6K6 122 aa2.74□□□□□ -1.97
SYNE2-202ENST00000344113 A8MUN3 132 aa2.74□□□□□ -1.97
SYNE2-202ENST00000344113 BRCA1P38398 1863 aaKnown RBP2.74□□□□□ -1.97
SYNE2-202ENST00000344113 PLXNA1Q9UIW2 1896 aa2.74□□□□□ -1.97
SYNE2-202ENST00000344113 GPHB5Q86YW7 130 aa2.74□□□□□ -1.97
SYNE2-202ENST00000344113 C9orf106Q8NAJ2 232 aa2.74□□□□□ -1.97
SYNE2-202ENST00000344113 TRBV7-4A0A0J9YYF1 115 aa2.74□□□□□ -1.97
SYNE2-202ENST00000344113 IGLV11-55A0A075B6I3 123 aa2.74□□□□□ -1.97
SYNE2-202ENST00000344113 IGKV1OR2-108A0A075B7D4 117 aa2.74□□□□□ -1.97
SYNE2-202ENST00000344113 Q75L30 129 aa2.73□□□□□ -1.97
SYNE2-202ENST00000344113 C11orf72Q8NBR9 251 aa2.73□□□□□ -1.97
SYNE2-202ENST00000344113 CRIPTQ9P021 101 aa2.73□□□□□ -1.97
SYNE2-202ENST00000344113 RNASE3P12724 160 aaKnown RBP2.73□□□□□ -1.97
SYNE2-202ENST00000344113 RPL39P62891 51 aaKnown RBP2.73□□□□□ -1.97
SYNE2-202ENST00000344113 IGHV4-31P0DP07 118 aa2.73□□□□□ -1.97
SYNE2-202ENST00000344113 Q9BRP9 147 aa2.73□□□□□ -1.97
SYNE2-202ENST00000344113 XIRP1Q702N8 1843 aaKnown RBP2.73□□□□□ -1.97
SYNE2-202ENST00000344113 CHCHD7Q9BUK0 85 aa2.73□□□□□ -1.97
SYNE2-202ENST00000344113 PAPPA2Q9BXP8 1791 aa2.73□□□□□ -1.97
SYNE2-202ENST00000344113 LINC00167Q96N53 147 aa2.73□□□□□ -1.97
SYNE2-202ENST00000344113 PRO0255Q9UI72 69 aa2.73□□□□□ -1.97
SYNE2-202ENST00000344113 FHL2Q14192 279 aa2.73□□□□□ -1.97
SYNE2-202ENST00000344113 SPINK13Q1W4C9 94 aa2.73□□□□□ -1.97
SYNE2-202ENST00000344113 CDKN2A-AS1Q9UH64 79 aa2.73□□□□□ -1.97
SYNE2-202ENST00000344113 CPAMD8Q8IZJ3 1885 aa2.73□□□□□ -1.97
SYNE2-202ENST00000344113 WDR90Q96KV7 1748 aa2.72□□□□□ -1.97
SYNE2-202ENST00000344113 B4DSR2 109 aa2.72□□□□□ -1.97
SYNE2-202ENST00000344113 C5orf56Q8N8D9 126 aa2.72□□□□□ -1.97
SYNE2-202ENST00000344113 Q6ZTC4 211 aa2.72□□□□□ -1.97
SYNE2-202ENST00000344113 ZNF580Q9UK33 172 aa2.72□□□□□ -1.97
SYNE2-202ENST00000344113 PLXNB3Q9ULL4 1909 aa2.72□□□□□ -1.97
SYNE2-202ENST00000344113 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.72□□□□□ -1.97
SYNE2-202ENST00000344113 IGHV3OR16-10A0A075B7F0 116 aa2.72□□□□□ -1.97
SYNE2-202ENST00000344113 IGKV2-29A2NJV5 120 aaPredicted RBP2.72□□□□□ -1.97
SYNE2-202ENST00000344113 CENPFP49454 3210 aa2.72□□□□□ -1.97
SYNE2-202ENST00000344113 HTN3P15516 51 aa2.72□□□□□ -1.97
SYNE2-202ENST00000344113 CEP192Q8TEP8 1941 aa2.72□□□□□ -1.97
SYNE2-202ENST00000344113 IGLV1-44P01699 117 aa2.72□□□□□ -1.97
SYNE2-202ENST00000344113 RBM12B-AS1Q9P1G2 102 aa2.72□□□□□ -1.97
SYNE2-202ENST00000344113 IGHV3-16A0A0C4DH30 117 aa2.72□□□□□ -1.97
SYNE2-202ENST00000344113 IGHV3-53P01767 116 aa2.72□□□□□ -1.97
SYNE2-202ENST00000344113 IGHV3-11P01762 117 aa2.72□□□□□ -1.97
SYNE2-202ENST00000344113 C6orf48Q9UBA6 75 aa2.72□□□□□ -1.97
SYNE2-202ENST00000344113 KRTAP16-1A8MUX0 517 aa2.72□□□□□ -1.97
SYNE2-202ENST00000344113 IGLV5-39A0A0G2JS06 123 aa2.71□□□□□ -1.97
SYNE2-202ENST00000344113 PATE2Q6UY27 113 aa2.71□□□□□ -1.97
SYNE2-202ENST00000344113 A6NDX4 124 aa2.71□□□□□ -1.98
SYNE2-202ENST00000344113 BRWD1-AS2P59051 145 aa2.71□□□□□ -1.98
SYNE2-202ENST00000344113 Q8N9W7 124 aa2.71□□□□□ -1.98
SYNE2-202ENST00000344113 CHTF8P0CG12 524 aa2.71□□□□□ -1.98
SYNE2-202ENST00000344113 CLPSP04118 112 aa2.71□□□□□ -1.98
SYNE2-202ENST00000344113 LINC00575Q6W349 94 aa2.71□□□□□ -1.98
SYNE2-202ENST00000344113 CCL19Q99731 98 aa2.71□□□□□ -1.98
SYNE2-202ENST00000344113 LHBP01229 141 aa2.71□□□□□ -1.98
SYNE2-202ENST00000344113 IGHV6-1A0A0B4J1U7 121 aa2.71□□□□□ -1.98
SYNE2-202ENST00000344113 C1orf137Q5JT78 98 aa2.71□□□□□ -1.98
SYNE2-202ENST00000344113 ZFP36P26651 326 aaKnown RBP2.71□□□□□ -1.98
SYNE2-202ENST00000344113 PROK2Q9HC23 129 aa2.71□□□□□ -1.98
SYNE2-202ENST00000344113 IGLV4-69A0A075B6H9 119 aa2.71□□□□□ -1.98
SYNE2-202ENST00000344113 ZNF702PQ9H963 129 aa2.71□□□□□ -1.98
SYNE2-202ENST00000344113 C22orf34Q6ZV56 151 aa2.71□□□□□ -1.98
SYNE2-202ENST00000344113 SMCR5Q8TEV8 140 aa2.71□□□□□ -1.98
SYNE2-202ENST00000344113 CEMP1Q6PRD7 247 aaPredicted RBP2.71□□□□□ -1.98
SYNE2-202ENST00000344113 PLXNA2O75051 1894 aa2.71□□□□□ -1.98
SYNE2-202ENST00000344113 COL18A1P39060 1754 aa2.7□□□□□ -1.98
SYNE2-202ENST00000344113 LINC00322Q6ZN03 302 aaPredicted RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms