RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 NDUFA1O15239 70 aa10.54□□□□□ -0.72
VIPAS39-202ENST00000343765 FAM110AQ9BQ89 295 aa10.54□□□□□ -0.72
VIPAS39-202ENST00000343765 SMIM1B2RUZ4 78 aa10.54□□□□□ -0.72
VIPAS39-202ENST00000343765 TRIAP1O43715 76 aa10.54□□□□□ -0.72
VIPAS39-202ENST00000343765 GAGE6Q13070 117 aa10.54□□□□□ -0.72
VIPAS39-202ENST00000343765 LY6G6DO95868 133 aa10.53□□□□□ -0.72
VIPAS39-202ENST00000343765 CSDC2Q9Y534 153 aaKnown RBP10.53□□□□□ -0.72
VIPAS39-202ENST00000343765 IGLV5-39A0A0G2JS06 123 aa10.52□□□□□ -0.73
VIPAS39-202ENST00000343765 CRLF1O75462 422 aa10.52□□□□□ -0.73
VIPAS39-202ENST00000343765 ANKRD29Q8N6D5 301 aa10.52□□□□□ -0.73
VIPAS39-202ENST00000343765 OVOL2Q9BRP0 275 aa10.52□□□□□ -0.73
VIPAS39-202ENST00000343765 TRBV6-4A0A1B0GX49 114 aa10.52□□□□□ -0.73
VIPAS39-202ENST00000343765 SMAGPQ0VAQ4 97 aa10.52□□□□□ -0.73
VIPAS39-202ENST00000343765 SLC25A20O43772 301 aa10.51□□□□□ -0.73
VIPAS39-202ENST00000343765 FHL2Q14192 279 aa10.51□□□□□ -0.73
VIPAS39-202ENST00000343765 TEN1Q86WV5 123 aa10.51□□□□□ -0.73
VIPAS39-202ENST00000343765 ICOSQ9Y6W8 199 aa10.51□□□□□ -0.73
VIPAS39-202ENST00000343765 CIRBPQ14011 172 aaKnown RBP10.51□□□□□ -0.73
VIPAS39-202ENST00000343765 PRIMA1Q86XR5 153 aa10.51□□□□□ -0.73
VIPAS39-202ENST00000343765 ATP6V0E2Q8NHE4 81 aa10.51□□□□□ -0.73
VIPAS39-202ENST00000343765 CARD19Q96LW7 228 aa10.51□□□□□ -0.73
VIPAS39-202ENST00000343765 SIGMAR1Q99720 223 aa10.51□□□□□ -0.73
VIPAS39-202ENST00000343765 MEIG1Q5JSS6 88 aa10.5□□□□□ -0.73
VIPAS39-202ENST00000343765 LINC00482Q8N8I6 264 aa10.5□□□□□ -0.73
VIPAS39-202ENST00000343765 RPL13AP40429 203 aaKnown RBP10.5□□□□□ -0.73
VIPAS39-202ENST00000343765 CHCHD5Q9BSY4 110 aa10.5□□□□□ -0.73
VIPAS39-202ENST00000343765 TEP1Q99973 2627 aaKnown RBP10.5□□□□□ -0.73
VIPAS39-202ENST00000343765 TIMM17BO60830 172 aa10.49□□□□□ -0.73
VIPAS39-202ENST00000343765 ATXN8Q156A1 80 aa10.49□□□□□ -0.73
VIPAS39-202ENST00000343765 IGLV4-60A0A075B6I1 120 aa10.49□□□□□ -0.73
VIPAS39-202ENST00000343765 F5H768 121 aa10.49□□□□□ -0.73
VIPAS39-202ENST00000343765 PPDPFLQ8WWR9 84 aa10.49□□□□□ -0.73
VIPAS39-202ENST00000343765 SPATA25Q9BR10 227 aa10.48□□□□□ -0.73
VIPAS39-202ENST00000343765 TRBV30A0A0K0K1B3 111 aa10.48□□□□□ -0.73
VIPAS39-202ENST00000343765 INAFM1C9JVW0 142 aa10.48□□□□□ -0.73
VIPAS39-202ENST00000343765 FAM19A3Q7Z5A8 133 aa10.48□□□□□ -0.73
VIPAS39-202ENST00000343765 LINC00308Q8TCZ7 52 aa10.48□□□□□ -0.73
VIPAS39-202ENST00000343765 LINC01620Q4KN68 170 aa10.48□□□□□ -0.73
VIPAS39-202ENST00000343765 CLEC2BQ92478 149 aa10.48□□□□□ -0.73
VIPAS39-202ENST00000343765 TOMM7Q9P0U1 55 aa10.48□□□□□ -0.73
VIPAS39-202ENST00000343765 TRBV6-8A0A0A6YYG3 113 aa10.47□□□□□ -0.73
VIPAS39-202ENST00000343765 IFITM1P13164 125 aa10.47□□□□□ -0.73
VIPAS39-202ENST00000343765 SOSTDC1Q6X4U4 206 aa10.46□□□□□ -0.73
VIPAS39-202ENST00000343765 A0A096LPF7 62 aa10.46□□□□□ -0.74
VIPAS39-202ENST00000343765 DEFB4AO15263 64 aa10.45□□□□□ -0.74
VIPAS39-202ENST00000343765 CIDEAO60543 219 aa10.44□□□□□ -0.74
VIPAS39-202ENST00000343765 COX6CP09669 75 aa10.44□□□□□ -0.74
VIPAS39-202ENST00000343765 GYPEP15421 78 aa10.44□□□□□ -0.74
VIPAS39-202ENST00000343765 NTN5Q8WTR8 489 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-202ENST00000343765 CDIP1Q9H305 208 aa10.44□□□□□ -0.74
VIPAS39-202ENST00000343765 X6R8D5 127 aa10.43□□□□□ -0.74
VIPAS39-202ENST00000343765 TMEM262E9PQX1 116 aa10.42□□□□□ -0.74
VIPAS39-202ENST00000343765 H7C423 109 aa10.42□□□□□ -0.74
VIPAS39-202ENST00000343765 C5orf38Q86SI9 138 aa10.42□□□□□ -0.74
VIPAS39-202ENST00000343765 RNF183Q96D59 192 aa10.42□□□□□ -0.74
VIPAS39-202ENST00000343765 DEFB135Q30KP9 77 aa10.42□□□□□ -0.74
VIPAS39-202ENST00000343765 CLPSL2Q6UWE3 100 aa10.42□□□□□ -0.74
VIPAS39-202ENST00000343765 COX7B2Q8TF08 81 aa10.42□□□□□ -0.74
VIPAS39-202ENST00000343765 TRBV10-2A0A0K0K1G8 114 aa10.41□□□□□ -0.74
VIPAS39-202ENST00000343765 FAM222AQ5U5X8 452 aa10.41□□□□□ -0.74
VIPAS39-202ENST00000343765 KIR2DL5BQ8NHK3 375 aa10.41□□□□□ -0.74
VIPAS39-202ENST00000343765 C11orf68Q9H3H3 251 aaKnown RBP10.41□□□□□ -0.74
VIPAS39-202ENST00000343765 TEX49A0A1B0GTD5 131 aa10.4□□□□□ -0.74
VIPAS39-202ENST00000343765 HERV-K104P63124 156 aa10.4□□□□□ -0.74
VIPAS39-202ENST00000343765 C2orf82Q6UX34 121 aa10.4□□□□□ -0.74
VIPAS39-202ENST00000343765 F8P00451 2351 aa10.39□□□□□ -0.75
VIPAS39-202ENST00000343765 PKD1L1Q8TDX9 2849 aa10.39□□□□□ -0.75
VIPAS39-202ENST00000343765 C9orf66Q5T8R8 295 aa10.39□□□□□ -0.75
VIPAS39-202ENST00000343765 MT-ATP8P03928 68 aa10.38□□□□□ -0.75
VIPAS39-202ENST00000343765 IGHV3OR16-9A0A0B4J2B5 98 aa10.38□□□□□ -0.75
VIPAS39-202ENST00000343765 LST1O00453 97 aa10.38□□□□□ -0.75
VIPAS39-202ENST00000343765 XCL1P47992 114 aa10.38□□□□□ -0.75
VIPAS39-202ENST00000343765 XGP55808 180 aa10.38□□□□□ -0.75
VIPAS39-202ENST00000343765 MIR7-3HGQ8N6C7 128 aa10.38□□□□□ -0.75
VIPAS39-202ENST00000343765 LINC00612Q8N6U2 182 aa10.37□□□□□ -0.75
VIPAS39-202ENST00000343765 COPS9Q8WXC6 57 aa10.37□□□□□ -0.75
VIPAS39-202ENST00000343765 LINC00959A0A1B0GUT2 108 aa10.37□□□□□ -0.75
VIPAS39-202ENST00000343765 LINC00158P58513 81 aa10.37□□□□□ -0.75
VIPAS39-202ENST00000343765 PRO0255Q9UI72 69 aa10.37□□□□□ -0.75
VIPAS39-202ENST00000343765 STAB1Q9NY15 2570 aa10.36□□□□□ -0.75
VIPAS39-202ENST00000343765 M0QXV9 152 aa10.36□□□□□ -0.75
VIPAS39-202ENST00000343765 PAX4O43316 350 aa10.36□□□□□ -0.75
VIPAS39-202ENST00000343765 PFN2P35080 140 aa10.36□□□□□ -0.75
VIPAS39-202ENST00000343765 UBE2WQ96B02 151 aa10.36□□□□□ -0.75
VIPAS39-202ENST00000343765 A0A087WZ39 114 aa10.34□□□□□ -0.75
VIPAS39-202ENST00000343765 SMIM9A6NGZ8 99 aa10.34□□□□□ -0.75
VIPAS39-202ENST00000343765 IGHV4-28A0A0C4DH34 117 aa10.33□□□□□ -0.76
VIPAS39-202ENST00000343765 SCGB1A1P11684 91 aa10.33□□□□□ -0.76
VIPAS39-202ENST00000343765 Q8N3U1 123 aa10.33□□□□□ -0.76
VIPAS39-202ENST00000343765 COX7A2LO14548 114 aa10.32□□□□□ -0.76
VIPAS39-202ENST00000343765 SND1-IT1Q9HBX3 110 aa10.32□□□□□ -0.76
VIPAS39-202ENST00000343765 H3BT86 120 aa10.32□□□□□ -0.76
VIPAS39-202ENST00000343765 HTN3P15516 51 aa10.32□□□□□ -0.76
VIPAS39-202ENST00000343765 C6orf226Q5I0X4 101 aa10.31□□□□□ -0.76
VIPAS39-202ENST00000343765 SHISA2Q6UWI4 295 aa10.31□□□□□ -0.76
VIPAS39-202ENST00000343765 CELA1Q9UNI1 258 aa10.31□□□□□ -0.76
VIPAS39-202ENST00000343765 LYRM9A8MSI8 78 aa10.31□□□□□ -0.76
VIPAS39-202ENST00000343765 CRPP02741 224 aa10.31□□□□□ -0.76
VIPAS39-202ENST00000343765 DAD1P61803 113 aa10.31□□□□□ -0.76
VIPAS39-202ENST00000343765 SS18Q15532 418 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms