RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 A0A0J9YXY3 114 aa13.82□□□□□ -0.2
RTN1-202ENST00000342503 A0A1B0GUV1 79 aa13.82□□□□□ -0.2
RTN1-202ENST00000342503 IGLV5-39A0A0G2JS06 123 aa13.81□□□□□ -0.2
RTN1-202ENST00000342503 C9orf118A6NHY6 69 aa13.81□□□□□ -0.2
RTN1-202ENST00000342503 SMIM1B2RUZ4 78 aa13.81□□□□□ -0.2
RTN1-202ENST00000342503 ZFAND6Q6FIF0 208 aa13.81□□□□□ -0.2
RTN1-202ENST00000342503 MDFIQ99750 246 aa13.81□□□□□ -0.2
RTN1-202ENST00000342503 A0A0J9YWU9 116 aa13.81□□□□□ -0.2
RTN1-202ENST00000342503 K7EIL1 84 aa13.8□□□□□ -0.2
RTN1-202ENST00000342503 IGHV3-30P01768 117 aa13.8□□□□□ -0.2
RTN1-202ENST00000342503 IGHV3-30-5P0DP03 117 aa13.8□□□□□ -0.2
RTN1-202ENST00000342503 SH2D6Q7Z4S9 175 aa13.8□□□□□ -0.2
RTN1-202ENST00000342503 VAMP3Q15836 100 aa13.79□□□□□ -0.2
RTN1-202ENST00000342503 Q6ZTC4 211 aa13.79□□□□□ -0.2
RTN1-202ENST00000342503 LINC00959A0A1B0GUT2 108 aa13.78□□□□□ -0.2
RTN1-202ENST00000342503 NAA38Q9BRA0 125 aaKnown RBP13.78□□□□□ -0.2
RTN1-202ENST00000342503 TMEM238C9JI98 176 aa13.77□□□□□ -0.21
RTN1-202ENST00000342503 H3BUT2 72 aa13.77□□□□□ -0.21
RTN1-202ENST00000342503 NDUFA1O15239 70 aa13.76□□□□□ -0.21
RTN1-202ENST00000342503 LELP1Q5T871 98 aa13.76□□□□□ -0.21
RTN1-202ENST00000342503 TMEM238LA0A1B0GVL6 79 aa13.76□□□□□ -0.21
RTN1-202ENST00000342503 A0A1B0GWB2 263 aa13.76□□□□□ -0.21
RTN1-202ENST00000342503 A6NJY4 79 aa13.76□□□□□ -0.21
RTN1-202ENST00000342503 NANOS2P60321 138 aaKnown RBP13.76□□□□□ -0.21
RTN1-202ENST00000342503 KPRPQ5T749 579 aaPredicted RBP13.76□□□□□ -0.21
RTN1-202ENST00000342503 LITAFQ99732 161 aa13.76□□□□□ -0.21
RTN1-202ENST00000342503 DEFB121Q5J5C9 76 aa13.75□□□□□ -0.21
RTN1-202ENST00000342503 Q8N3U1 123 aa13.75□□□□□ -0.21
RTN1-202ENST00000342503 SPATA25Q9BR10 227 aa13.75□□□□□ -0.21
RTN1-202ENST00000342503 IGHV3OR16-9A0A0B4J2B5 98 aa13.74□□□□□ -0.21
RTN1-202ENST00000342503 CLPSL2Q6UWE3 100 aa13.74□□□□□ -0.21
RTN1-202ENST00000342503 H3BNG1 76 aa13.73□□□□□ -0.21
RTN1-202ENST00000342503 UBE2V1Q13404 147 aa13.73□□□□□ -0.21
RTN1-202ENST00000342503 SS18Q15532 418 aa13.73□□□□□ -0.21
RTN1-202ENST00000342503 LYPD5Q6UWN5 251 aa13.73□□□□□ -0.21
RTN1-202ENST00000342503 C11orf45Q8TAV5 145 aa13.73□□□□□ -0.21
RTN1-202ENST00000342503 MUSTN1Q8IVN3 82 aa13.73□□□□□ -0.21
RTN1-202ENST00000342503 MRAPQ8TCY5 172 aa13.73□□□□□ -0.21
RTN1-202ENST00000342503 TM2D3Q9BRN9 247 aa13.73□□□□□ -0.21
RTN1-202ENST00000342503 Q9H8V8 135 aa13.73□□□□□ -0.21
RTN1-202ENST00000342503 ADAMTSL4-AS1Q5T5F5 129 aa13.72□□□□□ -0.21
RTN1-202ENST00000342503 LINC00269Q8N2A0 174 aa13.72□□□□□ -0.21
RTN1-202ENST00000342503 A0A087WZ39 114 aa13.7□□□□□ -0.22
RTN1-202ENST00000342503 A0A1W2PPM0 123 aa13.7□□□□□ -0.22
RTN1-202ENST00000342503 IGLL5B9A064 214 aa13.7□□□□□ -0.22
RTN1-202ENST00000342503 CCL25O15444 150 aa13.7□□□□□ -0.22
RTN1-202ENST00000342503 ANGP03950 147 aaKnown RBP13.7□□□□□ -0.22
RTN1-202ENST00000342503 C5orf38Q86SI9 138 aa13.7□□□□□ -0.22
RTN1-202ENST00000342503 SPANXDQ9BXN6 97 aa13.7□□□□□ -0.22
RTN1-202ENST00000342503 SPANXCQ9NY87 97 aa13.7□□□□□ -0.22
RTN1-202ENST00000342503 TENM3Q9P273 2699 aa13.7□□□□□ -0.22
RTN1-202ENST00000342503 TIMM17BO60830 172 aa13.7□□□□□ -0.22
RTN1-202ENST00000342503 XCL1P47992 114 aa13.7□□□□□ -0.22
RTN1-202ENST00000342503 NOTCH1P46531 2555 aa13.69□□□□□ -0.22
RTN1-202ENST00000342503 DEFB131BA0A096LNP1 70 aa13.69□□□□□ -0.22
RTN1-202ENST00000342503 APOMO95445 188 aa13.69□□□□□ -0.22
RTN1-202ENST00000342503 COX7B2Q8TF08 81 aa13.69□□□□□ -0.22
RTN1-202ENST00000342503 ZNF625Q96I27 306 aaPredicted RBP13.69□□□□□ -0.22
RTN1-202ENST00000342503 A4D1N5 150 aa13.67□□□□□ -0.22
RTN1-202ENST00000342503 CFC1BP0CG36 223 aa13.67□□□□□ -0.22
RTN1-202ENST00000342503 CFC1P0CG37 223 aa13.67□□□□□ -0.22
RTN1-202ENST00000342503 RPL24P83731 157 aaKnown RBP13.67□□□□□ -0.22
RTN1-202ENST00000342503 REG3AQ06141 175 aa13.67□□□□□ -0.22
RTN1-202ENST00000342503 MIAQ16674 131 aa13.67□□□□□ -0.22
RTN1-202ENST00000342503 TOMM7Q9P0U1 55 aa13.67□□□□□ -0.22
RTN1-202ENST00000342503 PRSS2P07478 247 aa13.66□□□□□ -0.22
RTN1-202ENST00000342503 FABP2P12104 132 aa13.65□□□□□ -0.22
RTN1-202ENST00000342503 CIRBPQ14011 172 aaKnown RBP13.65□□□□□ -0.22
RTN1-202ENST00000342503 GAGE10A6NGK3 116 aa13.64□□□□□ -0.23
RTN1-202ENST00000342503 HERV-K104P63124 156 aa13.64□□□□□ -0.23
RTN1-202ENST00000342503 K7EP34 96 aa13.64□□□□□ -0.23
RTN1-202ENST00000342503 NPC2P61916 151 aa13.64□□□□□ -0.23
RTN1-202ENST00000342503 DAND5Q8N907 189 aa13.64□□□□□ -0.23
RTN1-202ENST00000342503 CHCHD10Q8WYQ3 142 aaPredicted RBP13.64□□□□□ -0.23
RTN1-202ENST00000342503 PGPEP1Q9NXJ5 209 aa13.64□□□□□ -0.23
RTN1-202ENST00000342503 EIF4EBP3O60516 100 aaPredicted RBP13.63□□□□□ -0.23
RTN1-202ENST00000342503 SPCS1Q9Y6A9 102 aa13.63□□□□□ -0.23
RTN1-202ENST00000342503 HUWE1Q7Z6Z7 4374 aaKnown RBP13.63□□□□□ -0.23
RTN1-202ENST00000342503 NBEAL1Q6ZS30 2694 aa13.63□□□□□ -0.23
RTN1-202ENST00000342503 IGLV10-54A0A075B6I4 117 aa13.62□□□□□ -0.23
RTN1-202ENST00000342503 MEIG1Q5JSS6 88 aa13.62□□□□□ -0.23
RTN1-202ENST00000342503 CD164L2Q6UWJ8 174 aa13.62□□□□□ -0.23
RTN1-202ENST00000342503 GTF2H5Q6ZYL4 71 aa13.62□□□□□ -0.23
RTN1-202ENST00000342503 A0A0U1RRA0 63 aa13.61□□□□□ -0.23
RTN1-202ENST00000342503 LINC01561Q8N1V8 128 aa13.61□□□□□ -0.23
RTN1-202ENST00000342503 KLK12Q9UKR0 248 aa13.61□□□□□ -0.23
RTN1-202ENST00000342503 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.61□□□□□ -0.23
RTN1-202ENST00000342503 TSPAN13O95857 204 aa13.61□□□□□ -0.23
RTN1-202ENST00000342503 IGHV3-33P01772 117 aa13.61□□□□□ -0.23
RTN1-202ENST00000342503 IFITM1P13164 125 aa13.61□□□□□ -0.23
RTN1-202ENST00000342503 ESRGQ1W209 222 aa13.61□□□□□ -0.23
RTN1-202ENST00000342503 WFDC10BQ8IUB3 73 aa13.61□□□□□ -0.23
RTN1-202ENST00000342503 PRO1854Q9UHT4 67 aa13.6□□□□□ -0.23
RTN1-202ENST00000342503 TRAV10A0A0B4J240 114 aa13.59□□□□□ -0.23
RTN1-202ENST00000342503 A0A0B4J2C4 111 aa13.59□□□□□ -0.23
RTN1-202ENST00000342503 PRR34Q9NV39 138 aa13.59□□□□□ -0.23
RTN1-202ENST00000342503 COX7A2LO14548 114 aa13.58□□□□□ -0.24
RTN1-202ENST00000342503 ENHOQ6UWT2 76 aa13.58□□□□□ -0.24
RTN1-202ENST00000342503 LINC00308Q8TCZ7 52 aa13.58□□□□□ -0.24
RTN1-202ENST00000342503 FOXI1Q12951 378 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms