RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 IFITM1P13164 125 aa12.55□□□□□ -0.4
LRCH3-201ENST00000334859 FAM19A3Q7Z5A8 133 aa12.55□□□□□ -0.4
LRCH3-201ENST00000334859 GCN1Q92616 2671 aaKnown RBP12.55□□□□□ -0.4
LRCH3-201ENST00000334859 TRBV6-4A0A1B0GX49 114 aa12.55□□□□□ -0.4
LRCH3-201ENST00000334859 OVOL2Q9BRP0 275 aa12.55□□□□□ -0.4
LRCH3-201ENST00000334859 PF4P02776 101 aa12.54□□□□□ -0.4
LRCH3-201ENST00000334859 RPL13AP40429 203 aaKnown RBP12.54□□□□□ -0.4
LRCH3-201ENST00000334859 LINC01620Q4KN68 170 aa12.54□□□□□ -0.4
LRCH3-201ENST00000334859 PRIMA1Q86XR5 153 aa12.54□□□□□ -0.4
LRCH3-201ENST00000334859 RNF183Q96D59 192 aa12.53□□□□□ -0.4
LRCH3-201ENST00000334859 KMT2BQ9UMN6 2715 aaPredicted RBP12.52□□□□□ -0.41
LRCH3-201ENST00000334859 COX6CP09669 75 aa12.52□□□□□ -0.41
LRCH3-201ENST00000334859 GAGE6Q13070 117 aa12.52□□□□□ -0.41
LRCH3-201ENST00000334859 MEIG1Q5JSS6 88 aa12.52□□□□□ -0.41
LRCH3-201ENST00000334859 HECTD1Q9ULT8 2610 aa12.52□□□□□ -0.41
LRCH3-201ENST00000334859 IGKV3OR2-268A0A0C4DH90 116 aa12.51□□□□□ -0.41
LRCH3-201ENST00000334859 F5H768 121 aa12.51□□□□□ -0.41
LRCH3-201ENST00000334859 LINC00308Q8TCZ7 52 aa12.51□□□□□ -0.41
LRCH3-201ENST00000334859 CIDEAO60543 219 aa12.51□□□□□ -0.41
LRCH3-201ENST00000334859 FN1P02751 2386 aaKnown RBP12.51□□□□□ -0.41
LRCH3-201ENST00000334859 NOTCH2Q04721 2471 aa12.5□□□□□ -0.41
LRCH3-201ENST00000334859 DEFB130BP0DP73 79 aa12.5□□□□□ -0.41
LRCH3-201ENST00000334859 DEFB130AP0DP74 79 aa12.5□□□□□ -0.41
LRCH3-201ENST00000334859 CDIP1Q9H305 208 aa12.5□□□□□ -0.41
LRCH3-201ENST00000334859 KRTAP10-3P60369 221 aa12.5□□□□□ -0.41
LRCH3-201ENST00000334859 FHL2Q14192 279 aa12.5□□□□□ -0.41
LRCH3-201ENST00000334859 M0QXV9 152 aa12.49□□□□□ -0.41
LRCH3-201ENST00000334859 CLEC2BQ92478 149 aa12.49□□□□□ -0.41
LRCH3-201ENST00000334859 CHCHD5Q9BSY4 110 aa12.49□□□□□ -0.41
LRCH3-201ENST00000334859 H7C423 109 aa12.48□□□□□ -0.41
LRCH3-201ENST00000334859 CRLF1O75462 422 aa12.48□□□□□ -0.41
LRCH3-201ENST00000334859 SCGB1A1P11684 91 aa12.48□□□□□ -0.41
LRCH3-201ENST00000334859 VWFP04275 2813 aa12.48□□□□□ -0.41
LRCH3-201ENST00000334859 TRBV6-8A0A0A6YYG3 113 aa12.48□□□□□ -0.41
LRCH3-201ENST00000334859 NTN5Q8WTR8 489 aaPredicted RBP12.48□□□□□ -0.41
LRCH3-201ENST00000334859 NBEAL2Q6ZNJ1 2754 aa12.47□□□□□ -0.41
LRCH3-201ENST00000334859 TRBV10-2A0A0K0K1G8 114 aa12.47□□□□□ -0.41
LRCH3-201ENST00000334859 LINC00482Q8N8I6 264 aa12.47□□□□□ -0.41
LRCH3-201ENST00000334859 COPS9Q8WXC6 57 aa12.47□□□□□ -0.41
LRCH3-201ENST00000334859 HERV-K104P63124 156 aa12.46□□□□□ -0.42
LRCH3-201ENST00000334859 SOSTDC1Q6X4U4 206 aa12.46□□□□□ -0.42
LRCH3-201ENST00000334859 IGLV4-60A0A075B6I1 120 aa12.45□□□□□ -0.42
LRCH3-201ENST00000334859 TOMM7Q9P0U1 55 aa12.45□□□□□ -0.42
LRCH3-201ENST00000334859 C2orf82Q6UX34 121 aa12.44□□□□□ -0.42
LRCH3-201ENST00000334859 LST1O00453 97 aa12.43□□□□□ -0.42
LRCH3-201ENST00000334859 XGP55808 180 aa12.43□□□□□ -0.42
LRCH3-201ENST00000334859 TEX49A0A1B0GTD5 131 aa12.42□□□□□ -0.42
LRCH3-201ENST00000334859 LY6G6DO95868 133 aa12.42□□□□□ -0.42
LRCH3-201ENST00000334859 MT-ATP8P03928 68 aa12.42□□□□□ -0.42
LRCH3-201ENST00000334859 COX7B2Q8TF08 81 aa12.42□□□□□ -0.42
LRCH3-201ENST00000334859 KIR2DL5BQ8NHK3 375 aa12.41□□□□□ -0.42
LRCH3-201ENST00000334859 GYPEP15421 78 aa12.41□□□□□ -0.42
LRCH3-201ENST00000334859 UBE2WQ96B02 151 aa12.41□□□□□ -0.42
LRCH3-201ENST00000334859 OTOGQ6ZRI0 2925 aa12.41□□□□□ -0.42
LRCH3-201ENST00000334859 TMEM262E9PQX1 116 aa12.4□□□□□ -0.42
LRCH3-201ENST00000334859 NSD1Q96L73 2696 aaPredicted RBP12.39□□□□□ -0.43
LRCH3-201ENST00000334859 H3BT86 120 aa12.39□□□□□ -0.43
LRCH3-201ENST00000334859 LINC01600Q96MT4 127 aa12.39□□□□□ -0.43
LRCH3-201ENST00000334859 X6R8D5 127 aa12.39□□□□□ -0.43
LRCH3-201ENST00000334859 TENM1Q9UKZ4 2725 aa12.38□□□□□ -0.43
LRCH3-201ENST00000334859 IGHV3OR16-9A0A0B4J2B5 98 aa12.38□□□□□ -0.43
LRCH3-201ENST00000334859 LINC00612Q8N6U2 182 aa12.38□□□□□ -0.43
LRCH3-201ENST00000334859 SPATA3Q8NHX4 192 aa12.38□□□□□ -0.43
LRCH3-201ENST00000334859 C5orf38Q86SI9 138 aa12.37□□□□□ -0.43
LRCH3-201ENST00000334859 MIR7-3HGQ8N6C7 128 aa12.37□□□□□ -0.43
LRCH3-201ENST00000334859 A0A096LPF7 62 aa12.36□□□□□ -0.43
LRCH3-201ENST00000334859 INAFM1C9JVW0 142 aa12.36□□□□□ -0.43
LRCH3-201ENST00000334859 COX7A2LO14548 114 aa12.36□□□□□ -0.43
LRCH3-201ENST00000334859 A0A087WZ39 114 aa12.35□□□□□ -0.43
LRCH3-201ENST00000334859 LINC00158P58513 81 aa12.35□□□□□ -0.43
LRCH3-201ENST00000334859 C9orf66Q5T8R8 295 aa12.35□□□□□ -0.43
LRCH3-201ENST00000334859 FAM222AQ5U5X8 452 aa12.35□□□□□ -0.43
LRCH3-201ENST00000334859 SHISA2Q6UWI4 295 aa12.35□□□□□ -0.43
LRCH3-201ENST00000334859 PRO0255Q9UI72 69 aa12.35□□□□□ -0.43
LRCH3-201ENST00000334859 LINC00959A0A1B0GUT2 108 aa12.34□□□□□ -0.43
LRCH3-201ENST00000334859 SMIM9A6NGZ8 99 aa12.34□□□□□ -0.43
LRCH3-201ENST00000334859 DEFB135Q30KP9 77 aa12.34□□□□□ -0.43
LRCH3-201ENST00000334859 TRAV8-4A0A0B4J246 113 aa12.34□□□□□ -0.43
LRCH3-201ENST00000334859 DEFB4AO15263 64 aa12.34□□□□□ -0.43
LRCH3-201ENST00000334859 CLPSL2Q6UWE3 100 aa12.34□□□□□ -0.43
LRCH3-201ENST00000334859 C11orf68Q9H3H3 251 aaKnown RBP12.34□□□□□ -0.43
LRCH3-201ENST00000334859 CRPP02741 224 aa12.33□□□□□ -0.44
LRCH3-201ENST00000334859 XCL1P47992 114 aa12.33□□□□□ -0.44
LRCH3-201ENST00000334859 SND1-IT1Q9HBX3 110 aa12.32□□□□□ -0.44
LRCH3-201ENST00000334859 PAX4O43316 350 aa12.31□□□□□ -0.44
LRCH3-201ENST00000334859 PPDPFQ9H3Y8 114 aa12.31□□□□□ -0.44
LRCH3-201ENST00000334859 PFN2P35080 140 aa12.31□□□□□ -0.44
LRCH3-201ENST00000334859 ATRQ13535 2644 aa12.31□□□□□ -0.44
LRCH3-201ENST00000334859 TRAV13-2A0A0B4J235 113 aa12.3□□□□□ -0.44
LRCH3-201ENST00000334859 A0A1B0GV72 72 aa12.3□□□□□ -0.44
LRCH3-201ENST00000334859 LYRM9A8MSI8 78 aa12.3□□□□□ -0.44
LRCH3-201ENST00000334859 SS18Q15532 418 aa12.3□□□□□ -0.44
LRCH3-201ENST00000334859 LINC00337Q8N6G1 96 aa12.29□□□□□ -0.44
LRCH3-201ENST00000334859 IBA57-AS1B1ANH7 110 aa12.28□□□□□ -0.44
LRCH3-201ENST00000334859 CKS1BP61024 79 aa12.28□□□□□ -0.44
LRCH3-201ENST00000334859 C6orf226Q5I0X4 101 aa12.28□□□□□ -0.44
LRCH3-201ENST00000334859 A0A1B0GUV1 79 aa12.28□□□□□ -0.44
LRCH3-201ENST00000334859 IGKV2-28A0A075B6P5 120 aa12.27□□□□□ -0.44
LRCH3-201ENST00000334859 IGKV2D-28P01615 120 aa12.27□□□□□ -0.44
LRCH3-201ENST00000334859 APOC4P55056 127 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms