RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 K7ERJ3 54 aa6.13□□□□□ -1.43
LSAMP-201ENST00000333617 IGHV3-30-3P0DP02 117 aa6.13□□□□□ -1.43
LSAMP-201ENST00000333617 TIRAPP58753 221 aa6.13□□□□□ -1.43
LSAMP-201ENST00000333617 KRTAP24-1Q3LI83 254 aa6.13□□□□□ -1.43
LSAMP-201ENST00000333617 TMEM101Q96IK0 257 aa6.13□□□□□ -1.43
LSAMP-201ENST00000333617 SPANXB1Q9NS25 103 aaPredicted RBP6.13□□□□□ -1.43
LSAMP-201ENST00000333617 TRAV8-3A0A0A6YYJ7 113 aa6.12□□□□□ -1.43
LSAMP-201ENST00000333617 IGHV1-58A0A0C4DH39 117 aa6.12□□□□□ -1.43
LSAMP-201ENST00000333617 C12orf74Q32Q52 190 aa6.12□□□□□ -1.43
LSAMP-201ENST00000333617 FAM222AQ5U5X8 452 aa6.12□□□□□ -1.43
LSAMP-201ENST00000333617 NAA38Q9BRA0 125 aaKnown RBP6.12□□□□□ -1.43
LSAMP-201ENST00000333617 CDC42SE2Q9NRR3 84 aa6.12□□□□□ -1.43
LSAMP-201ENST00000333617 IGLV5-45A0A087WSX0 123 aa6.11□□□□□ -1.43
LSAMP-201ENST00000333617 TRBV6-8A0A0A6YYG3 113 aa6.11□□□□□ -1.43
LSAMP-201ENST00000333617 IGHV4-28A0A0C4DH34 117 aa6.11□□□□□ -1.43
LSAMP-201ENST00000333617 A0A1W2PPM0 123 aa6.11□□□□□ -1.43
LSAMP-201ENST00000333617 SPINK8P0C7L1 97 aa6.11□□□□□ -1.43
LSAMP-201ENST00000333617 IGHV4-30-4P0DP06 118 aa6.11□□□□□ -1.43
LSAMP-201ENST00000333617 GYPEP15421 78 aa6.11□□□□□ -1.43
LSAMP-201ENST00000333617 HERVK_113P63121 156 aa6.11□□□□□ -1.43
LSAMP-201ENST00000333617 FAM19A3Q7Z5A8 133 aa6.11□□□□□ -1.43
LSAMP-201ENST00000333617 VSIG2Q96IQ7 327 aa6.11□□□□□ -1.43
LSAMP-201ENST00000333617 GAGE10A6NGK3 116 aa6.1□□□□□ -1.43
LSAMP-201ENST00000333617 DEFB4AO15263 64 aa6.1□□□□□ -1.43
LSAMP-201ENST00000333617 FABP2P12104 132 aa6.1□□□□□ -1.43
LSAMP-201ENST00000333617 MIFP14174 115 aa6.1□□□□□ -1.43
LSAMP-201ENST00000333617 LINC00242Q5T6M2 205 aa6.1□□□□□ -1.43
LSAMP-201ENST00000333617 GTF2H5Q6ZYL4 71 aa6.1□□□□□ -1.43
LSAMP-201ENST00000333617 C3orf56Q8N813 242 aa6.1□□□□□ -1.43
LSAMP-201ENST00000333617 CDKN2A-AS1Q9UH64 79 aa6.1□□□□□ -1.43
LSAMP-201ENST00000333617 PRO0255Q9UI72 69 aa6.1□□□□□ -1.43
LSAMP-201ENST00000333617 TRAV13-1A0A0B4J241 112 aa6.1□□□□□ -1.43
LSAMP-201ENST00000333617 A0A1B0GWB2 263 aa6.1□□□□□ -1.43
LSAMP-201ENST00000333617 IGHV3-30P01768 117 aa6.1□□□□□ -1.43
LSAMP-201ENST00000333617 IGHV3-30-5P0DP03 117 aa6.1□□□□□ -1.43
LSAMP-201ENST00000333617 COX6A2Q02221 97 aa6.1□□□□□ -1.43
LSAMP-201ENST00000333617 GAGE6Q13070 117 aa6.1□□□□□ -1.43
LSAMP-201ENST00000333617 ATP6V0E2Q8NHE4 81 aa6.1□□□□□ -1.43
LSAMP-201ENST00000333617 RNF183Q96D59 192 aa6.1□□□□□ -1.43
LSAMP-201ENST00000333617 NOTCH1P46531 2555 aa6.09□□□□□ -1.43
LSAMP-201ENST00000333617 A0A0J9YXY3 114 aa6.09□□□□□ -1.43
LSAMP-201ENST00000333617 IGLL5B9A064 214 aa6.09□□□□□ -1.43
LSAMP-201ENST00000333617 TMEM238C9JI98 176 aa6.09□□□□□ -1.43
LSAMP-201ENST00000333617 K7EP34 96 aa6.09□□□□□ -1.43
LSAMP-201ENST00000333617 DAD1P61803 113 aa6.09□□□□□ -1.43
LSAMP-201ENST00000333617 C10orf126Q8N4M7 172 aa6.09□□□□□ -1.43
LSAMP-201ENST00000333617 Q8NAQ8 132 aa6.09□□□□□ -1.43
LSAMP-201ENST00000333617 CHCHD5Q9BSY4 110 aa6.09□□□□□ -1.43
LSAMP-201ENST00000333617 NDUFA12Q9UI09 145 aa6.09□□□□□ -1.43
LSAMP-201ENST00000333617 CBY1Q9Y3M2 126 aa6.09□□□□□ -1.43
LSAMP-201ENST00000333617 SPCS1Q9Y6A9 102 aa6.09□□□□□ -1.43
LSAMP-201ENST00000333617 ZFAND6Q6FIF0 208 aa6.08□□□□□ -1.44
LSAMP-201ENST00000333617 NBEAL1Q6ZS30 2694 aa6.08□□□□□ -1.44
LSAMP-201ENST00000333617 A8MZ25 164 aa6.07□□□□□ -1.44
LSAMP-201ENST00000333617 APOMO95445 188 aa6.07□□□□□ -1.44
LSAMP-201ENST00000333617 TENM3Q9P273 2699 aa6.07□□□□□ -1.44
LSAMP-201ENST00000333617 IGLV5-39A0A0G2JS06 123 aa6.06□□□□□ -1.44
LSAMP-201ENST00000333617 ATP5G1P05496 136 aa6.06□□□□□ -1.44
LSAMP-201ENST00000333617 SPART-AS1P0CW21 52 aa6.06□□□□□ -1.44
LSAMP-201ENST00000333617 KRTAP10-11P60412 298 aa6.06□□□□□ -1.44
LSAMP-201ENST00000333617 RPL24P83731 157 aaKnown RBP6.06□□□□□ -1.44
LSAMP-201ENST00000333617 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.06□□□□□ -1.44
LSAMP-201ENST00000333617 CELA1Q9UNI1 258 aa6.06□□□□□ -1.44
LSAMP-201ENST00000333617 IGLV4-60A0A075B6I1 120 aa6.06□□□□□ -1.44
LSAMP-201ENST00000333617 SMIM1B2RUZ4 78 aa6.06□□□□□ -1.44
LSAMP-201ENST00000333617 NDUFA1O15239 70 aa6.06□□□□□ -1.44
LSAMP-201ENST00000333617 CFC1BP0CG36 223 aa6.06□□□□□ -1.44
LSAMP-201ENST00000333617 CFC1P0CG37 223 aa6.06□□□□□ -1.44
LSAMP-201ENST00000333617 EGFEM1PQ0D2K5 195 aa6.06□□□□□ -1.44
LSAMP-201ENST00000333617 MUSTN1Q8IVN3 82 aa6.06□□□□□ -1.44
LSAMP-201ENST00000333617 WWC2-AS2Q96NR7 200 aa6.06□□□□□ -1.44
LSAMP-201ENST00000333617 SPANXDQ9BXN6 97 aa6.06□□□□□ -1.44
LSAMP-201ENST00000333617 SPANXCQ9NY87 97 aa6.06□□□□□ -1.44
LSAMP-201ENST00000333617 A0A096LPF7 62 aa6.05□□□□□ -1.44
LSAMP-201ENST00000333617 IGKV3OR2-268A0A0C4DH90 116 aa6.05□□□□□ -1.44
LSAMP-201ENST00000333617 TEX48A0A1B0GUV7 120 aa6.05□□□□□ -1.44
LSAMP-201ENST00000333617 TMEM262E9PQX1 116 aa6.05□□□□□ -1.44
LSAMP-201ENST00000333617 F5H768 121 aa6.05□□□□□ -1.44
LSAMP-201ENST00000333617 TIMM17BO60830 172 aa6.05□□□□□ -1.44
LSAMP-201ENST00000333617 PRIMA1Q86XR5 153 aa6.05□□□□□ -1.44
LSAMP-201ENST00000333617 LITAFQ99732 161 aa6.05□□□□□ -1.44
LSAMP-201ENST00000333617 A0A1B0GUV1 79 aa6.04□□□□□ -1.44
LSAMP-201ENST00000333617 A4D1N5 150 aa6.04□□□□□ -1.44
LSAMP-201ENST00000333617 TSPAN13O95857 204 aa6.04□□□□□ -1.44
LSAMP-201ENST00000333617 PRSS2P07478 247 aa6.04□□□□□ -1.44
LSAMP-201ENST00000333617 CIRBPQ14011 172 aaKnown RBP6.04□□□□□ -1.44
LSAMP-201ENST00000333617 MIAQ16674 131 aa6.04□□□□□ -1.44
LSAMP-201ENST00000333617 ADAMTSL4-AS1Q5T5F5 129 aa6.04□□□□□ -1.44
LSAMP-201ENST00000333617 PRO1854Q9UHT4 67 aa6.04□□□□□ -1.44
LSAMP-201ENST00000333617 TRAV26-1A0A087WT03 109 aa6.03□□□□□ -1.44
LSAMP-201ENST00000333617 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.03□□□□□ -1.44
LSAMP-201ENST00000333617 HTN3P15516 51 aa6.03□□□□□ -1.44
LSAMP-201ENST00000333617 Q9H8V8 135 aa6.03□□□□□ -1.44
LSAMP-201ENST00000333617 A0A0B4J2C4 111 aa6.02□□□□□ -1.45
LSAMP-201ENST00000333617 RBX1P62877 108 aa6.02□□□□□ -1.45
LSAMP-201ENST00000333617 MRPL23Q16540 153 aaKnown RBP6.02□□□□□ -1.45
LSAMP-201ENST00000333617 LINC00959A0A1B0GUT2 108 aa6.01□□□□□ -1.45
LSAMP-201ENST00000333617 IFITM1P13164 125 aa6.01□□□□□ -1.45
LSAMP-201ENST00000333617 HERV-K104P63124 156 aa6.01□□□□□ -1.45
LSAMP-201ENST00000333617 SH2D6Q7Z4S9 175 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms