RNA–Protein interactions for RNA: ENST00000332839.8

SLC8A1-201, Transcript of solute carrier family 8 member A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC8A1, Length 2,922 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8A1-201ENST00000332839 LMO4P61968 165 aa6.56□□□□□ -1.36
SLC8A1-201ENST00000332839 HIGD2BQ4VC39 106 aa6.56□□□□□ -1.36
SLC8A1-201ENST00000332839 CHCHD10Q8WYQ3 142 aaPredicted RBP6.56□□□□□ -1.36
SLC8A1-201ENST00000332839 B9D2Q9BPU9 175 aa6.56□□□□□ -1.36
SLC8A1-201ENST00000332839 SND1-IT1Q9HBX3 110 aa6.56□□□□□ -1.36
SLC8A1-201ENST00000332839 ZNRD1Q9P1U0 126 aa6.56□□□□□ -1.36
SLC8A1-201ENST00000332839 CDKN2A-AS1Q9UH64 79 aa6.56□□□□□ -1.36
SLC8A1-201ENST00000332839 C5orf42Q9H799 3197 aa6.55□□□□□ -1.36
SLC8A1-201ENST00000332839 IGKV4-1P06312 121 aa6.55□□□□□ -1.36
SLC8A1-201ENST00000332839 ELOF1P60002 83 aaKnown RBP6.55□□□□□ -1.36
SLC8A1-201ENST00000332839 NTM-AS1Q6ZSK4 140 aa6.55□□□□□ -1.36
SLC8A1-201ENST00000332839 MRGPRG-AS1Q2M3A8 158 aa6.54□□□□□ -1.36
SLC8A1-201ENST00000332839 Q8NAQ8 132 aa6.54□□□□□ -1.36
SLC8A1-201ENST00000332839 SORL1Q92673 2214 aa6.54□□□□□ -1.36
SLC8A1-201ENST00000332839 LINC01006Q8NI28 216 aa6.54□□□□□ -1.36
SLC8A1-201ENST00000332839 LINC00208Q96KT6 92 aa6.54□□□□□ -1.36
SLC8A1-201ENST00000332839 TMEM105Q8N8V8 129 aa6.53□□□□□ -1.36
SLC8A1-201ENST00000332839 IGHV3-49A0A0A0MS15 119 aa6.53□□□□□ -1.36
SLC8A1-201ENST00000332839 IGLV5-39A0A0G2JS06 123 aa6.53□□□□□ -1.36
SLC8A1-201ENST00000332839 CLPSL1A2RUU4 121 aa6.53□□□□□ -1.36
SLC8A1-201ENST00000332839 C1orf134Q5TEV5 83 aa6.53□□□□□ -1.36
SLC8A1-201ENST00000332839 PDE6GP18545 87 aa6.53□□□□□ -1.36
SLC8A1-201ENST00000332839 PRR9Q5T870 116 aa6.53□□□□□ -1.36
SLC8A1-201ENST00000332839 Q9BRP9 147 aa6.53□□□□□ -1.36
SLC8A1-201ENST00000332839 Q8N9L7 120 aa6.52□□□□□ -1.37
SLC8A1-201ENST00000332839 IGLV4-60A0A075B6I1 120 aa6.52□□□□□ -1.37
SLC8A1-201ENST00000332839 IGLV5-45A0A087WSX0 123 aa6.52□□□□□ -1.37
SLC8A1-201ENST00000332839 NDUFB1O75438 58 aa6.52□□□□□ -1.37
SLC8A1-201ENST00000332839 GGNQ86UU5 652 aa6.52□□□□□ -1.37
SLC8A1-201ENST00000332839 C9orf66Q5T8R8 295 aa6.51□□□□□ -1.37
SLC8A1-201ENST00000332839 IGHV1-3A0A0C4DH29 117 aa6.51□□□□□ -1.37
SLC8A1-201ENST00000332839 K7EIM0 57 aa6.51□□□□□ -1.37
SLC8A1-201ENST00000332839 A0A087X002 238 aa6.5□□□□□ -1.37
SLC8A1-201ENST00000332839 RNASE3P12724 160 aaKnown RBP6.5□□□□□ -1.37
SLC8A1-201ENST00000332839 ZNF702PQ9H963 129 aa6.5□□□□□ -1.37
SLC8A1-201ENST00000332839 VPS13AQ96RL7 3174 aa6.5□□□□□ -1.37
SLC8A1-201ENST00000332839 MRPL33O75394 65 aaKnown RBP6.5□□□□□ -1.37
SLC8A1-201ENST00000332839 IGHV3-16A0A0C4DH30 117 aa6.49□□□□□ -1.37
SLC8A1-201ENST00000332839 FAM74A4Q5TZK3 123 aa6.49□□□□□ -1.37
SLC8A1-201ENST00000332839 IGHV3-53P01767 116 aa6.49□□□□□ -1.37
SLC8A1-201ENST00000332839 GYPEP15421 78 aa6.49□□□□□ -1.37
SLC8A1-201ENST00000332839 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.49□□□□□ -1.37
SLC8A1-201ENST00000332839 M0QY20 66 aa6.49□□□□□ -1.37
SLC8A1-201ENST00000332839 IGHV3-73A0A0B4J1V6 119 aa6.48□□□□□ -1.37
SLC8A1-201ENST00000332839 ATP6V0E1O15342 81 aa6.48□□□□□ -1.37
SLC8A1-201ENST00000332839 SPINK7P58062 85 aa6.48□□□□□ -1.37
SLC8A1-201ENST00000332839 LINC00612Q8N6U2 182 aa6.48□□□□□ -1.37
SLC8A1-201ENST00000332839 URB1O60287 2271 aaKnown RBP6.48□□□□□ -1.37
SLC8A1-201ENST00000332839 NDUFA4O00483 81 aa6.48□□□□□ -1.37
SLC8A1-201ENST00000332839 TRIOO75962 3097 aa6.47□□□□□ -1.37
SLC8A1-201ENST00000332839 LY6G6DO95868 133 aa6.47□□□□□ -1.37
SLC8A1-201ENST00000332839 SMIM29Q86T20 159 aa6.47□□□□□ -1.37
SLC8A1-201ENST00000332839 COL27A1Q8IZC6 1860 aaPredicted RBP6.47□□□□□ -1.37
SLC8A1-201ENST00000332839 INAFM1C9JVW0 142 aa6.46□□□□□ -1.37
SLC8A1-201ENST00000332839 CSAG1Q6PB30 78 aa6.46□□□□□ -1.37
SLC8A1-201ENST00000332839 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.46□□□□□ -1.37
SLC8A1-201ENST00000332839 LENEPQ9Y5L5 61 aa6.46□□□□□ -1.37
SLC8A1-201ENST00000332839 SRRM5B3KS81 715 aa6.46□□□□□ -1.38
SLC8A1-201ENST00000332839 COX6A2Q02221 97 aa6.46□□□□□ -1.38
SLC8A1-201ENST00000332839 ATP1A1-AS1Q5TC04 95 aa6.46□□□□□ -1.38
SLC8A1-201ENST00000332839 SMIM1B2RUZ4 78 aa6.46□□□□□ -1.38
SLC8A1-201ENST00000332839 IGKV3-15P01624 115 aa6.46□□□□□ -1.38
SLC8A1-201ENST00000332839 ROMO1P60602 79 aa6.46□□□□□ -1.38
SLC8A1-201ENST00000332839 MUC7Q8TAX7 377 aa6.46□□□□□ -1.38
SLC8A1-201ENST00000332839 COX7B2Q8TF08 81 aa6.46□□□□□ -1.38
SLC8A1-201ENST00000332839 IGKV3D-15A0A087WSY6 115 aa6.45□□□□□ -1.38
SLC8A1-201ENST00000332839 A0A1W2PNM2 257 aa6.45□□□□□ -1.38
SLC8A1-201ENST00000332839 IGHV4-31P0DP07 118 aa6.45□□□□□ -1.38
SLC8A1-201ENST00000332839 CCL18P55774 89 aa6.45□□□□□ -1.38
SLC8A1-201ENST00000332839 RTL8CO15255 209 aa6.45□□□□□ -1.38
SLC8A1-201ENST00000332839 LINC01558Q9Y6Z2 57 aa6.45□□□□□ -1.38
SLC8A1-201ENST00000332839 DNAH14Q0VDD8 3507 aa6.44□□□□□ -1.38
SLC8A1-201ENST00000332839 MRPS21P82921 87 aaKnown RBP6.44□□□□□ -1.38
SLC8A1-201ENST00000332839 WFDC10AQ9H1F0 79 aa6.44□□□□□ -1.38
SLC8A1-201ENST00000332839 MUC6Q6W4X9 2439 aa6.44□□□□□ -1.38
SLC8A1-201ENST00000332839 KNL1Q8NG31 2342 aa6.44□□□□□ -1.38
SLC8A1-201ENST00000332839 TRGV2A0A075B6R0 118 aa6.44□□□□□ -1.38
SLC8A1-201ENST00000332839 A0A096LNT2 108 aa6.44□□□□□ -1.38
SLC8A1-201ENST00000332839 ZFAND2AQ8N6M9 145 aa6.44□□□□□ -1.38
SLC8A1-201ENST00000332839 NOTCH2NLQ7Z3S9 236 aa6.43□□□□□ -1.38
SLC8A1-201ENST00000332839 PLAC8Q9NZF1 115 aa6.43□□□□□ -1.38
SLC8A1-201ENST00000332839 ABCA1O95477 2261 aa6.43□□□□□ -1.38
SLC8A1-201ENST00000332839 TTTY12Q9BZ98 90 aa6.43□□□□□ -1.38
SLC8A1-201ENST00000332839 ETDCA0A1B0GVM5 59 aa6.43□□□□□ -1.38
SLC8A1-201ENST00000332839 TRBV6-4A0A1B0GX49 114 aa6.43□□□□□ -1.38
SLC8A1-201ENST00000332839 LINC00242Q5T6M2 205 aa6.43□□□□□ -1.38
SLC8A1-201ENST00000332839 Q6ZR54 194 aa6.43□□□□□ -1.38
SLC8A1-201ENST00000332839 SPANXA2-OT1Q8N9U9 137 aa6.43□□□□□ -1.38
SLC8A1-201ENST00000332839 SDK1Q7Z5N4 2213 aa6.42□□□□□ -1.38
SLC8A1-201ENST00000332839 CFAP54Q96N23 3096 aa6.42□□□□□ -1.38
SLC8A1-201ENST00000332839 C10orf25Q5T742 122 aa6.42□□□□□ -1.38
SLC8A1-201ENST00000332839 LINC00158P58513 81 aa6.41□□□□□ -1.38
SLC8A1-201ENST00000332839 ZDBF2Q9HCK1 2354 aa6.41□□□□□ -1.38
SLC8A1-201ENST00000332839 ST20-AS1Q8NBB2 130 aa6.41□□□□□ -1.38
SLC8A1-201ENST00000332839 C11orf71Q6IPW1 123 aa6.4□□□□□ -1.38
SLC8A1-201ENST00000332839 GAFA1Q96PS6 74 aa6.4□□□□□ -1.38
SLC8A1-201ENST00000332839 IGHV3-72A0A0B4J1Y9 119 aa6.4□□□□□ -1.39
SLC8A1-201ENST00000332839 IGLV1-47P01700 117 aa6.4□□□□□ -1.39
SLC8A1-201ENST00000332839 CCL3P10147 92 aa6.4□□□□□ -1.39
SLC8A1-201ENST00000332839 WDR87Q6ZQQ6 2873 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms