RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 IGHV3-30P01768 117 aa12.37□□□□□ -0.43
ACTB-201ENST00000331789 IGHV3-30-5P0DP03 117 aa12.37□□□□□ -0.43
ACTB-201ENST00000331789 ZFAND6Q6FIF0 208 aa12.37□□□□□ -0.43
ACTB-201ENST00000331789 MRPL23Q16540 153 aaKnown RBP12.36□□□□□ -0.43
ACTB-201ENST00000331789 A0A1B0GUV1 79 aa12.35□□□□□ -0.43
ACTB-201ENST00000331789 ICOSQ9Y6W8 199 aa12.35□□□□□ -0.43
ACTB-201ENST00000331789 UBE2V1Q13404 147 aa12.35□□□□□ -0.43
ACTB-201ENST00000331789 C11orf68Q9H3H3 251 aaKnown RBP12.35□□□□□ -0.43
ACTB-201ENST00000331789 A0A0J9YWU9 116 aa12.34□□□□□ -0.43
ACTB-201ENST00000331789 A0A1B0GWB2 263 aa12.33□□□□□ -0.44
ACTB-201ENST00000331789 CCL25O15444 150 aa12.33□□□□□ -0.44
ACTB-201ENST00000331789 MDFIQ99750 246 aa12.33□□□□□ -0.44
ACTB-201ENST00000331789 NOTCH1P46531 2555 aa12.33□□□□□ -0.44
ACTB-201ENST00000331789 ANK2Q01484 3957 aa12.33□□□□□ -0.44
ACTB-201ENST00000331789 LINC00959A0A1B0GUT2 108 aa12.33□□□□□ -0.44
ACTB-201ENST00000331789 Q6ZTC4 211 aa12.33□□□□□ -0.44
ACTB-201ENST00000331789 Q8N3U1 123 aa12.33□□□□□ -0.44
ACTB-201ENST00000331789 LITAFQ99732 161 aa12.33□□□□□ -0.44
ACTB-201ENST00000331789 TMEM238C9JI98 176 aa12.32□□□□□ -0.44
ACTB-201ENST00000331789 NDUFA1O15239 70 aa12.32□□□□□ -0.44
ACTB-201ENST00000331789 K7EIL1 84 aa12.31□□□□□ -0.44
ACTB-201ENST00000331789 ADAMTSL4-AS1Q5T5F5 129 aa12.31□□□□□ -0.44
ACTB-201ENST00000331789 CLPSL2Q6UWE3 100 aa12.31□□□□□ -0.44
ACTB-201ENST00000331789 MUSTN1Q8IVN3 82 aa12.31□□□□□ -0.44
ACTB-201ENST00000331789 TMEM238LA0A1B0GVL6 79 aa12.31□□□□□ -0.44
ACTB-201ENST00000331789 A6NJY4 79 aa12.31□□□□□ -0.44
ACTB-201ENST00000331789 IGLL5B9A064 214 aa12.31□□□□□ -0.44
ACTB-201ENST00000331789 TENM3Q9P273 2699 aa12.3□□□□□ -0.44
ACTB-201ENST00000331789 A0A1W2PPM0 123 aa12.3□□□□□ -0.44
ACTB-201ENST00000331789 SH2D6Q7Z4S9 175 aa12.3□□□□□ -0.44
ACTB-201ENST00000331789 IGHV3OR16-9A0A0B4J2B5 98 aa12.29□□□□□ -0.44
ACTB-201ENST00000331789 NANOS2P60321 138 aaKnown RBP12.29□□□□□ -0.44
ACTB-201ENST00000331789 DEFB121Q5J5C9 76 aa12.29□□□□□ -0.44
ACTB-201ENST00000331789 Q9H8V8 135 aa12.29□□□□□ -0.44
ACTB-201ENST00000331789 APOMO95445 188 aa12.29□□□□□ -0.44
ACTB-201ENST00000331789 LELP1Q5T871 98 aa12.29□□□□□ -0.44
ACTB-201ENST00000331789 C5orf38Q86SI9 138 aa12.28□□□□□ -0.44
ACTB-201ENST00000331789 LINC00269Q8N2A0 174 aa12.28□□□□□ -0.44
ACTB-201ENST00000331789 ZNF625Q96I27 306 aaPredicted RBP12.28□□□□□ -0.44
ACTB-201ENST00000331789 SS18Q15532 418 aa12.27□□□□□ -0.44
ACTB-201ENST00000331789 LYPD5Q6UWN5 251 aa12.27□□□□□ -0.44
ACTB-201ENST00000331789 MRAPQ8TCY5 172 aa12.27□□□□□ -0.44
ACTB-201ENST00000331789 A4D1N5 150 aa12.27□□□□□ -0.45
ACTB-201ENST00000331789 CFC1BP0CG36 223 aa12.27□□□□□ -0.45
ACTB-201ENST00000331789 CFC1P0CG37 223 aa12.27□□□□□ -0.45
ACTB-201ENST00000331789 KPRPQ5T749 579 aaPredicted RBP12.27□□□□□ -0.45
ACTB-201ENST00000331789 ANGP03950 147 aaKnown RBP12.26□□□□□ -0.45
ACTB-201ENST00000331789 PRSS2P07478 247 aa12.26□□□□□ -0.45
ACTB-201ENST00000331789 XCL1P47992 114 aa12.26□□□□□ -0.45
ACTB-201ENST00000331789 C11orf45Q8TAV5 145 aa12.26□□□□□ -0.45
ACTB-201ENST00000331789 SPANXDQ9BXN6 97 aa12.26□□□□□ -0.45
ACTB-201ENST00000331789 SPANXCQ9NY87 97 aa12.26□□□□□ -0.45
ACTB-201ENST00000331789 A0A087WZ39 114 aa12.25□□□□□ -0.45
ACTB-201ENST00000331789 GAGE10A6NGK3 116 aa12.25□□□□□ -0.45
ACTB-201ENST00000331789 COX7B2Q8TF08 81 aa12.25□□□□□ -0.45
ACTB-201ENST00000331789 TIMM17BO60830 172 aa12.25□□□□□ -0.45
ACTB-201ENST00000331789 FABP2P12104 132 aa12.25□□□□□ -0.45
ACTB-201ENST00000331789 NPC2P61916 151 aa12.25□□□□□ -0.45
ACTB-201ENST00000331789 RPL24P83731 157 aaKnown RBP12.25□□□□□ -0.45
ACTB-201ENST00000331789 MIAQ16674 131 aa12.25□□□□□ -0.45
ACTB-201ENST00000331789 DAND5Q8N907 189 aa12.25□□□□□ -0.45
ACTB-201ENST00000331789 SPATA25Q9BR10 227 aa12.25□□□□□ -0.45
ACTB-201ENST00000331789 TOMM7Q9P0U1 55 aa12.25□□□□□ -0.45
ACTB-201ENST00000331789 H3BNG1 76 aa12.24□□□□□ -0.45
ACTB-201ENST00000331789 K7EP34 96 aa12.24□□□□□ -0.45
ACTB-201ENST00000331789 EIF4EBP3O60516 100 aaPredicted RBP12.24□□□□□ -0.45
ACTB-201ENST00000331789 PGPEP1Q9NXJ5 209 aa12.24□□□□□ -0.45
ACTB-201ENST00000331789 TM2D3Q9BRN9 247 aa12.23□□□□□ -0.45
ACTB-201ENST00000331789 SPCS1Q9Y6A9 102 aa12.23□□□□□ -0.45
ACTB-201ENST00000331789 NBEAL1Q6ZS30 2694 aa12.23□□□□□ -0.45
ACTB-201ENST00000331789 DEFB131BA0A096LNP1 70 aa12.23□□□□□ -0.45
ACTB-201ENST00000331789 A0A0U1RRA0 63 aa12.23□□□□□ -0.45
ACTB-201ENST00000331789 REG3AQ06141 175 aa12.23□□□□□ -0.45
ACTB-201ENST00000331789 CIRBPQ14011 172 aaKnown RBP12.21□□□□□ -0.45
ACTB-201ENST00000331789 GTF2H5Q6ZYL4 71 aa12.21□□□□□ -0.45
ACTB-201ENST00000331789 IGLV10-54A0A075B6I4 117 aa12.21□□□□□ -0.46
ACTB-201ENST00000331789 TSPAN13O95857 204 aa12.21□□□□□ -0.46
ACTB-201ENST00000331789 MEIG1Q5JSS6 88 aa12.2□□□□□ -0.46
ACTB-201ENST00000331789 CHCHD10Q8WYQ3 142 aaPredicted RBP12.2□□□□□ -0.46
ACTB-201ENST00000331789 HERV-K104P63124 156 aa12.19□□□□□ -0.46
ACTB-201ENST00000331789 PRO1854Q9UHT4 67 aa12.19□□□□□ -0.46
ACTB-201ENST00000331789 IGHV3-33P01772 117 aa12.18□□□□□ -0.46
ACTB-201ENST00000331789 CD164L2Q6UWJ8 174 aa12.18□□□□□ -0.46
ACTB-201ENST00000331789 KLK12Q9UKR0 248 aa12.18□□□□□ -0.46
ACTB-201ENST00000331789 MGAM2Q2M2H8 2515 aa12.17□□□□□ -0.46
ACTB-201ENST00000331789 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.17□□□□□ -0.46
ACTB-201ENST00000331789 IFITM1P13164 125 aa12.17□□□□□ -0.46
ACTB-201ENST00000331789 ESRGQ1W209 222 aa12.17□□□□□ -0.46
ACTB-201ENST00000331789 SFTA2Q6UW10 78 aa12.17□□□□□ -0.46
ACTB-201ENST00000331789 A0A0B4J2C4 111 aa12.17□□□□□ -0.46
ACTB-201ENST00000331789 WFDC10BQ8IUB3 73 aa12.17□□□□□ -0.46
ACTB-201ENST00000331789 LINC00308Q8TCZ7 52 aa12.16□□□□□ -0.46
ACTB-201ENST00000331789 ENHOQ6UWT2 76 aa12.15□□□□□ -0.46
ACTB-201ENST00000331789 LINC01561Q8N1V8 128 aa12.15□□□□□ -0.46
ACTB-201ENST00000331789 PRR34Q9NV39 138 aa12.15□□□□□ -0.46
ACTB-201ENST00000331789 COX7A2LO14548 114 aa12.14□□□□□ -0.47
ACTB-201ENST00000331789 FOXI1Q12951 378 aa12.14□□□□□ -0.47
ACTB-201ENST00000331789 C6orf226Q5I0X4 101 aa12.14□□□□□ -0.47
ACTB-201ENST00000331789 SOSTDC1Q6X4U4 206 aa12.14□□□□□ -0.47
ACTB-201ENST00000331789 LOC107984156A0A0G2JMH3 177 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms