RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 KIR2DL5BQ8NHK3 375 aa10.25□□□□□ -0.77
TPM3-206ENST00000330188 GAGE6Q13070 117 aa10.24□□□□□ -0.77
TPM3-206ENST00000330188 CIRBPQ14011 172 aaKnown RBP10.24□□□□□ -0.77
TPM3-206ENST00000330188 TEN1Q86WV5 123 aa10.24□□□□□ -0.77
TPM3-206ENST00000330188 LINC00612Q8N6U2 182 aa10.24□□□□□ -0.77
TPM3-206ENST00000330188 SPATA3Q8NHX4 192 aa10.24□□□□□ -0.77
TPM3-206ENST00000330188 TRBV6-8A0A0A6YYG3 113 aa10.24□□□□□ -0.77
TPM3-206ENST00000330188 GAGE12HA6NDE8 117 aa10.24□□□□□ -0.77
TPM3-206ENST00000330188 ZNF625Q96I27 306 aaPredicted RBP10.24□□□□□ -0.77
TPM3-206ENST00000330188 SPATA25Q9BR10 227 aa10.24□□□□□ -0.77
TPM3-206ENST00000330188 DEFB130BP0DP73 79 aa10.23□□□□□ -0.77
TPM3-206ENST00000330188 DEFB130AP0DP74 79 aa10.23□□□□□ -0.77
TPM3-206ENST00000330188 CARD19Q96LW7 228 aa10.23□□□□□ -0.77
TPM3-206ENST00000330188 ICOSQ9Y6W8 199 aa10.23□□□□□ -0.77
TPM3-206ENST00000330188 X6R8D5 127 aa10.23□□□□□ -0.77
TPM3-206ENST00000330188 C9JAW5 83 aa10.22□□□□□ -0.77
TPM3-206ENST00000330188 INAFM1C9JVW0 142 aa10.22□□□□□ -0.77
TPM3-206ENST00000330188 SLC25A20O43772 301 aa10.22□□□□□ -0.77
TPM3-206ENST00000330188 ATXN8Q156A1 80 aa10.22□□□□□ -0.77
TPM3-206ENST00000330188 LINC00308Q8TCZ7 52 aa10.22□□□□□ -0.77
TPM3-206ENST00000330188 IGLV4-60A0A075B6I1 120 aa10.22□□□□□ -0.77
TPM3-206ENST00000330188 PPDPFLQ8WWR9 84 aa10.22□□□□□ -0.77
TPM3-206ENST00000330188 M0QXV9 152 aa10.21□□□□□ -0.77
TPM3-206ENST00000330188 PRIMA1Q86XR5 153 aa10.21□□□□□ -0.77
TPM3-206ENST00000330188 ANKRD29Q8N6D5 301 aa10.21□□□□□ -0.77
TPM3-206ENST00000330188 RPL13AP40429 203 aaKnown RBP10.21□□□□□ -0.78
TPM3-206ENST00000330188 LINC01620Q4KN68 170 aa10.21□□□□□ -0.78
TPM3-206ENST00000330188 C9orf66Q5T8R8 295 aa10.21□□□□□ -0.78
TPM3-206ENST00000330188 A0A0U1RRA0 63 aa10.2□□□□□ -0.78
TPM3-206ENST00000330188 SIGMAR1Q99720 223 aa10.2□□□□□ -0.78
TPM3-206ENST00000330188 CHCHD5Q9BSY4 110 aa10.2□□□□□ -0.78
TPM3-206ENST00000330188 C2CD3Q4AC94 2353 aa10.2□□□□□ -0.78
TPM3-206ENST00000330188 HERV-K104P63124 156 aa10.19□□□□□ -0.78
TPM3-206ENST00000330188 SOSTDC1Q6X4U4 206 aa10.19□□□□□ -0.78
TPM3-206ENST00000330188 MEIG1Q5JSS6 88 aa10.19□□□□□ -0.78
TPM3-206ENST00000330188 IGKV3OR2-268A0A0C4DH90 116 aa10.18□□□□□ -0.78
TPM3-206ENST00000330188 SMIM9A6NGZ8 99 aa10.18□□□□□ -0.78
TPM3-206ENST00000330188 GYPEP15421 78 aa10.18□□□□□ -0.78
TPM3-206ENST00000330188 COX6CP09669 75 aa10.17□□□□□ -0.78
TPM3-206ENST00000330188 COPS9Q8WXC6 57 aa10.17□□□□□ -0.78
TPM3-206ENST00000330188 IGHV3OR16-9A0A0B4J2B5 98 aa10.16□□□□□ -0.78
TPM3-206ENST00000330188 COX7B2Q8TF08 81 aa10.16□□□□□ -0.78
TPM3-206ENST00000330188 LINC01600Q96MT4 127 aa10.16□□□□□ -0.78
TPM3-206ENST00000330188 GCN1Q92616 2671 aaKnown RBP10.16□□□□□ -0.78
TPM3-206ENST00000330188 TRBV10-2A0A0K0K1G8 114 aa10.16□□□□□ -0.78
TPM3-206ENST00000330188 FAM222AQ5U5X8 452 aa10.15□□□□□ -0.78
TPM3-206ENST00000330188 CLEC2BQ92478 149 aa10.15□□□□□ -0.78
TPM3-206ENST00000330188 CDIP1Q9H305 208 aa10.15□□□□□ -0.78
TPM3-206ENST00000330188 OTOGQ6ZRI0 2925 aa10.15□□□□□ -0.78
TPM3-206ENST00000330188 PRO0255Q9UI72 69 aa10.15□□□□□ -0.79
TPM3-206ENST00000330188 PPDPFQ9H3Y8 114 aa10.14□□□□□ -0.79
TPM3-206ENST00000330188 LYRM9A8MSI8 78 aa10.13□□□□□ -0.79
TPM3-206ENST00000330188 LST1O00453 97 aa10.13□□□□□ -0.79
TPM3-206ENST00000330188 TOMM7Q9P0U1 55 aa10.13□□□□□ -0.79
TPM3-206ENST00000330188 HECTD1Q9ULT8 2610 aa10.13□□□□□ -0.79
TPM3-206ENST00000330188 FN1P02751 2386 aaKnown RBP10.13□□□□□ -0.79
TPM3-206ENST00000330188 A0A087WZ39 114 aa10.13□□□□□ -0.79
TPM3-206ENST00000330188 LINC00959A0A1B0GUT2 108 aa10.13□□□□□ -0.79
TPM3-206ENST00000330188 DEFB135Q30KP9 77 aa10.13□□□□□ -0.79
TPM3-206ENST00000330188 NTN5Q8WTR8 489 aaPredicted RBP10.12□□□□□ -0.79
TPM3-206ENST00000330188 CITED1Q99966 193 aa10.12□□□□□ -0.79
TPM3-206ENST00000330188 SCGB1A1P11684 91 aa10.12□□□□□ -0.79
TPM3-206ENST00000330188 A0A1B0GUV1 79 aa10.11□□□□□ -0.79
TPM3-206ENST00000330188 C5orf38Q86SI9 138 aa10.11□□□□□ -0.79
TPM3-206ENST00000330188 VWFP04275 2813 aa10.11□□□□□ -0.79
TPM3-206ENST00000330188 A0A096LPF7 62 aa10.1□□□□□ -0.79
TPM3-206ENST00000330188 TMEM262E9PQX1 116 aa10.1□□□□□ -0.79
TPM3-206ENST00000330188 DEFB4AO15263 64 aa10.1□□□□□ -0.79
TPM3-206ENST00000330188 PAX4O43316 350 aa10.1□□□□□ -0.79
TPM3-206ENST00000330188 APOC4P55056 127 aa10.1□□□□□ -0.79
TPM3-206ENST00000330188 SHISA2Q6UWI4 295 aa10.1□□□□□ -0.79
TPM3-206ENST00000330188 H3BT86 120 aa10.1□□□□□ -0.79
TPM3-206ENST00000330188 MIR7-3HGQ8N6C7 128 aa10.1□□□□□ -0.79
TPM3-206ENST00000330188 IGHV4-28A0A0C4DH34 117 aa10.09□□□□□ -0.79
TPM3-206ENST00000330188 C2orf82Q6UX34 121 aa10.09□□□□□ -0.79
TPM3-206ENST00000330188 NSD1Q96L73 2696 aaPredicted RBP10.09□□□□□ -0.79
TPM3-206ENST00000330188 TEX49A0A1B0GTD5 131 aa10.08□□□□□ -0.8
TPM3-206ENST00000330188 COX7A2LO14548 114 aa10.08□□□□□ -0.8
TPM3-206ENST00000330188 SS18Q15532 418 aa10.07□□□□□ -0.8
TPM3-206ENST00000330188 UBE2WQ96B02 151 aa10.07□□□□□ -0.8
TPM3-206ENST00000330188 IBA57-AS1B1ANH7 110 aa10.06□□□□□ -0.8
TPM3-206ENST00000330188 XCL1P47992 114 aa10.06□□□□□ -0.8
TPM3-206ENST00000330188 XGP55808 180 aa10.06□□□□□ -0.8
TPM3-206ENST00000330188 LINC00158P58513 81 aa10.06□□□□□ -0.8
TPM3-206ENST00000330188 DAD1P61803 113 aa10.06□□□□□ -0.8
TPM3-206ENST00000330188 Q8NAQ8 132 aa10.06□□□□□ -0.8
TPM3-206ENST00000330188 CELA1Q9UNI1 258 aa10.06□□□□□ -0.8
TPM3-206ENST00000330188 CLPSL2Q6UWE3 100 aa10.06□□□□□ -0.8
TPM3-206ENST00000330188 MT-ATP8P03928 68 aa10.05□□□□□ -0.8
TPM3-206ENST00000330188 NOTCH2Q04721 2471 aa10.05□□□□□ -0.8
TPM3-206ENST00000330188 IGKV2-28A0A075B6P5 120 aa10.04□□□□□ -0.8
TPM3-206ENST00000330188 TRAV13-2A0A0B4J235 113 aa10.04□□□□□ -0.8
TPM3-206ENST00000330188 IGKV2D-28P01615 120 aa10.04□□□□□ -0.8
TPM3-206ENST00000330188 MIFP14174 115 aa10.04□□□□□ -0.8
TPM3-206ENST00000330188 WFDC9Q8NEX5 89 aa10.04□□□□□ -0.8
TPM3-206ENST00000330188 SND1-IT1Q9HBX3 110 aa10.04□□□□□ -0.8
TPM3-206ENST00000330188 LINC00337Q8N6G1 96 aa10.04□□□□□ -0.8
TPM3-206ENST00000330188 NBEAL2Q6ZNJ1 2754 aa10.04□□□□□ -0.8
TPM3-206ENST00000330188 TENM1Q9UKZ4 2725 aa10.03□□□□□ -0.8
TPM3-206ENST00000330188 CRPP02741 224 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms