RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 H3BRM9 83 aa12.9□□□□□ -0.34
EXOSC3-201ENST00000327304 ZFAND6Q6FIF0 208 aa12.9□□□□□ -0.34
EXOSC3-201ENST00000327304 LINC00469Q8N7U9 141 aa12.9□□□□□ -0.34
EXOSC3-201ENST00000327304 IGHV1-58A0A0C4DH39 117 aa12.89□□□□□ -0.35
EXOSC3-201ENST00000327304 WWC2-AS2Q96NR7 200 aa12.89□□□□□ -0.35
EXOSC3-201ENST00000327304 STARD9Q9P2P6 4700 aa12.89□□□□□ -0.35
EXOSC3-201ENST00000327304 MUC7Q8TAX7 377 aa12.88□□□□□ -0.35
EXOSC3-201ENST00000327304 PLECQ15149 4684 aaKnown RBP12.88□□□□□ -0.35
EXOSC3-201ENST00000327304 A0A1B0GUV1 79 aa12.88□□□□□ -0.35
EXOSC3-201ENST00000327304 IGHV3-30-3P0DP02 117 aa12.88□□□□□ -0.35
EXOSC3-201ENST00000327304 LYPD5Q6UWN5 251 aa12.88□□□□□ -0.35
EXOSC3-201ENST00000327304 SCGB1D4Q6XE38 83 aa12.88□□□□□ -0.35
EXOSC3-201ENST00000327304 TRAV13-1A0A0B4J241 112 aa12.87□□□□□ -0.35
EXOSC3-201ENST00000327304 A6NDN8 102 aa12.87□□□□□ -0.35
EXOSC3-201ENST00000327304 TM2D2Q9BX73 214 aa12.87□□□□□ -0.35
EXOSC3-201ENST00000327304 CDKN2A-AS1Q9UH64 79 aa12.87□□□□□ -0.35
EXOSC3-201ENST00000327304 KLK5Q9Y337 293 aaPredicted RBP12.87□□□□□ -0.35
EXOSC3-201ENST00000327304 IGLV4-60A0A075B6I1 120 aa12.86□□□□□ -0.35
EXOSC3-201ENST00000327304 CEND1Q8N111 149 aa12.86□□□□□ -0.35
EXOSC3-201ENST00000327304 APLNQ9ULZ1 77 aa12.86□□□□□ -0.35
EXOSC3-201ENST00000327304 COX6A2Q02221 97 aa12.85□□□□□ -0.35
EXOSC3-201ENST00000327304 ESRGQ1W209 222 aa12.85□□□□□ -0.35
EXOSC3-201ENST00000327304 IGHV3-64A0A075B6Q5 118 aa12.85□□□□□ -0.35
EXOSC3-201ENST00000327304 HIST1H4GQ99525 98 aa12.85□□□□□ -0.35
EXOSC3-201ENST00000327304 TRAV8-3A0A0A6YYJ7 113 aa12.84□□□□□ -0.35
EXOSC3-201ENST00000327304 GCSHP23434 173 aa12.84□□□□□ -0.35
EXOSC3-201ENST00000327304 TENM2Q9NT68 2774 aa12.84□□□□□ -0.35
EXOSC3-201ENST00000327304 SPINK8P0C7L1 97 aa12.83□□□□□ -0.35
EXOSC3-201ENST00000327304 TMEM262E9PQX1 116 aa12.83□□□□□ -0.36
EXOSC3-201ENST00000327304 LELP1Q5T871 98 aa12.83□□□□□ -0.36
EXOSC3-201ENST00000327304 SPANXB1Q9NS25 103 aaPredicted RBP12.83□□□□□ -0.36
EXOSC3-201ENST00000327304 TAX1BP3O14907 124 aa12.82□□□□□ -0.36
EXOSC3-201ENST00000327304 RBX1P62877 108 aa12.82□□□□□ -0.36
EXOSC3-201ENST00000327304 IGLV5-39A0A0G2JS06 123 aa12.81□□□□□ -0.36
EXOSC3-201ENST00000327304 FXYD2P54710 66 aa12.81□□□□□ -0.36
EXOSC3-201ENST00000327304 COX11Q9Y6N1 276 aa12.81□□□□□ -0.36
EXOSC3-201ENST00000327304 PTTG1IPP53801 180 aa12.8□□□□□ -0.36
EXOSC3-201ENST00000327304 LINC00588Q9Y4M8 146 aa12.79□□□□□ -0.36
EXOSC3-201ENST00000327304 SMIM1B2RUZ4 78 aa12.78□□□□□ -0.36
EXOSC3-201ENST00000327304 CCL25O15444 150 aa12.78□□□□□ -0.36
EXOSC3-201ENST00000327304 SRSF9Q13242 221 aaKnown RBP eCLIP12.78□□□□□ -0.36
EXOSC3-201ENST00000327304 NDUFA12Q9UI09 145 aa12.78□□□□□ -0.36
EXOSC3-201ENST00000327304 LINC00959A0A1B0GUT2 108 aa12.78□□□□□ -0.36
EXOSC3-201ENST00000327304 C10orf126Q8N4M7 172 aa12.78□□□□□ -0.36
EXOSC3-201ENST00000327304 CCL18P55774 89 aa12.77□□□□□ -0.37
EXOSC3-201ENST00000327304 WFDC10BQ8IUB3 73 aa12.77□□□□□ -0.37
EXOSC3-201ENST00000327304 A0A0J9YXY3 114 aa12.76□□□□□ -0.37
EXOSC3-201ENST00000327304 Q8N3U1 123 aa12.76□□□□□ -0.37
EXOSC3-201ENST00000327304 IGKV3OR2-268A0A0C4DH90 116 aa12.76□□□□□ -0.37
EXOSC3-201ENST00000327304 TMEM238C9JI98 176 aa12.76□□□□□ -0.37
EXOSC3-201ENST00000327304 SMIM13P0DJ93 91 aa12.76□□□□□ -0.37
EXOSC3-201ENST00000327304 IGHV3OR16-9A0A0B4J2B5 98 aa12.75□□□□□ -0.37
EXOSC3-201ENST00000327304 K7EP13 123 aa12.75□□□□□ -0.37
EXOSC3-201ENST00000327304 NDUFA1O15239 70 aa12.75□□□□□ -0.37
EXOSC3-201ENST00000327304 SS18Q15532 418 aa12.75□□□□□ -0.37
EXOSC3-201ENST00000327304 CASC10Q5T4H9 136 aa12.75□□□□□ -0.37
EXOSC3-201ENST00000327304 VPS13DQ5THJ4 4388 aa12.75□□□□□ -0.37
EXOSC3-201ENST00000327304 TMEM238LA0A1B0GVL6 79 aa12.74□□□□□ -0.37
EXOSC3-201ENST00000327304 A6NJY4 79 aa12.74□□□□□ -0.37
EXOSC3-201ENST00000327304 Q6ZVH6 145 aa12.74□□□□□ -0.37
EXOSC3-201ENST00000327304 LYSTQ99698 3801 aa12.74□□□□□ -0.37
EXOSC3-201ENST00000327304 IGHV3-30P01768 117 aa12.74□□□□□ -0.37
EXOSC3-201ENST00000327304 IGHV3-30-5P0DP03 117 aa12.74□□□□□ -0.37
EXOSC3-201ENST00000327304 NHP2Q9NX24 153 aaKnown RBP12.74□□□□□ -0.37
EXOSC3-201ENST00000327304 A0A1B0GWB2 263 aa12.73□□□□□ -0.37
EXOSC3-201ENST00000327304 C3orf84H3BNL1 204 aa12.73□□□□□ -0.37
EXOSC3-201ENST00000327304 A0A087WZ39 114 aa12.72□□□□□ -0.37
EXOSC3-201ENST00000327304 DNAH1Q9P2D7 4330 aa12.72□□□□□ -0.37
EXOSC3-201ENST00000327304 C9orf118A6NHY6 69 aa12.72□□□□□ -0.37
EXOSC3-201ENST00000327304 TIMM17BO60830 172 aa12.72□□□□□ -0.37
EXOSC3-201ENST00000327304 UBE2DNLQ8IWF7 75 aa12.72□□□□□ -0.37
EXOSC3-201ENST00000327304 ANGP03950 147 aaKnown RBP12.71□□□□□ -0.38
EXOSC3-201ENST00000327304 LINC01561Q8N1V8 128 aa12.71□□□□□ -0.38
EXOSC3-201ENST00000327304 LINC00269Q8N2A0 174 aa12.71□□□□□ -0.38
EXOSC3-201ENST00000327304 LITAFQ99732 161 aa12.71□□□□□ -0.38
EXOSC3-201ENST00000327304 UPK3BQ9BT76 320 aa12.71□□□□□ -0.38
EXOSC3-201ENST00000327304 IGHV3-33P01772 117 aa12.7□□□□□ -0.38
EXOSC3-201ENST00000327304 SPANXDQ9BXN6 97 aa12.69□□□□□ -0.38
EXOSC3-201ENST00000327304 SPANXCQ9NY87 97 aa12.69□□□□□ -0.38
EXOSC3-201ENST00000327304 HERV-K104P63124 156 aa12.69□□□□□ -0.38
EXOSC3-201ENST00000327304 REG3AQ06141 175 aa12.69□□□□□ -0.38
EXOSC3-201ENST00000327304 RAB37Q96AX2 223 aa12.69□□□□□ -0.38
EXOSC3-201ENST00000327304 Q9H8V8 135 aa12.69□□□□□ -0.38
EXOSC3-201ENST00000327304 ZNF625Q96I27 306 aaPredicted RBP12.68□□□□□ -0.38
EXOSC3-201ENST00000327304 K7ERJ3 54 aa12.67□□□□□ -0.38
EXOSC3-201ENST00000327304 LINC01556Q5JQF7 62 aa12.67□□□□□ -0.38
EXOSC3-201ENST00000327304 COX7B2Q8TF08 81 aa12.67□□□□□ -0.38
EXOSC3-201ENST00000327304 DNAH10OSP0CZ25 163 aa12.67□□□□□ -0.38
EXOSC3-201ENST00000327304 XCL1P47992 114 aa12.67□□□□□ -0.38
EXOSC3-201ENST00000327304 CIRBPQ14011 172 aaKnown RBP12.67□□□□□ -0.38
EXOSC3-201ENST00000327304 CLPSL2Q6UWE3 100 aa12.67□□□□□ -0.38
EXOSC3-201ENST00000327304 RPL24P83731 157 aaKnown RBP12.66□□□□□ -0.38
EXOSC3-201ENST00000327304 CD164L2Q6UWJ8 174 aa12.66□□□□□ -0.38
EXOSC3-201ENST00000327304 C5orf38Q86SI9 138 aa12.66□□□□□ -0.38
EXOSC3-201ENST00000327304 PRR34Q9NV39 138 aa12.66□□□□□ -0.38
EXOSC3-201ENST00000327304 ALMS1Q8TCU4 4167 aa12.66□□□□□ -0.38
EXOSC3-201ENST00000327304 VAMP3Q15836 100 aa12.65□□□□□ -0.38
EXOSC3-201ENST00000327304 MIAQ16674 131 aa12.65□□□□□ -0.38
EXOSC3-201ENST00000327304 H3BUT2 72 aa12.65□□□□□ -0.39
EXOSC3-201ENST00000327304 MUSTN1Q8IVN3 82 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms