RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 C9orf85Q96MD7 179 aa11.32□□□□□ -0.6
GCFC2-201ENST00000321027 LINC00643Q86TS7 51 aa11.32□□□□□ -0.6
GCFC2-201ENST00000321027 TMEM256-PLSCR3K7ERE1 68 aa11.31□□□□□ -0.6
GCFC2-201ENST00000321027 C5orf47Q569G3 176 aa11.31□□□□□ -0.6
GCFC2-201ENST00000321027 NBEAQ8NFP9 2946 aa11.3□□□□□ -0.6
GCFC2-201ENST00000321027 DSPP15924 2871 aaKnown RBP11.3□□□□□ -0.6
GCFC2-201ENST00000321027 TRAV23DV6A0A075B6W5 121 aa11.3□□□□□ -0.6
GCFC2-201ENST00000321027 SLPIP03973 132 aa11.3□□□□□ -0.6
GCFC2-201ENST00000321027 TSPEAR-AS2P59090 65 aa11.3□□□□□ -0.6
GCFC2-201ENST00000321027 LINC00308Q8TCZ7 52 aa11.3□□□□□ -0.6
GCFC2-201ENST00000321027 BBC3Q96PG8 261 aaPredicted RBP11.29□□□□□ -0.6
GCFC2-201ENST00000321027 REG3AQ06141 175 aa11.29□□□□□ -0.6
GCFC2-201ENST00000321027 MAP1AP78559 2803 aaPredicted RBP11.29□□□□□ -0.6
GCFC2-201ENST00000321027 XGP55808 180 aa11.29□□□□□ -0.6
GCFC2-201ENST00000321027 IGLV4-69A0A075B6H9 119 aa11.28□□□□□ -0.6
GCFC2-201ENST00000321027 ZNF580Q9UK33 172 aa11.28□□□□□ -0.6
GCFC2-201ENST00000321027 WDFY3Q8IZQ1 3526 aa11.28□□□□□ -0.6
GCFC2-201ENST00000321027 XAGE1AQ9HD64 81 aa11.28□□□□□ -0.6
GCFC2-201ENST00000321027 IGKV2-24A0A0C4DH68 120 aa11.28□□□□□ -0.6
GCFC2-201ENST00000321027 INAFM1C9JVW0 142 aa11.28□□□□□ -0.6
GCFC2-201ENST00000321027 LINC00482Q8N8I6 264 aa11.27□□□□□ -0.6
GCFC2-201ENST00000321027 PYGO1Q9Y3Y4 419 aa11.27□□□□□ -0.6
GCFC2-201ENST00000321027 UBE2D1P51668 147 aa11.27□□□□□ -0.61
GCFC2-201ENST00000321027 CHCHD10Q8WYQ3 142 aaPredicted RBP11.27□□□□□ -0.61
GCFC2-201ENST00000321027 TRBV30A0A0K0K1B3 111 aa11.27□□□□□ -0.61
GCFC2-201ENST00000321027 SDIM1Q6ZPB5 146 aa11.26□□□□□ -0.61
GCFC2-201ENST00000321027 COX7BP24311 80 aa11.26□□□□□ -0.61
GCFC2-201ENST00000321027 LINC01006Q8NI28 216 aa11.26□□□□□ -0.61
GCFC2-201ENST00000321027 UBE2AP49459 152 aa11.25□□□□□ -0.61
GCFC2-201ENST00000321027 POM121L12Q8N7R1 296 aa11.25□□□□□ -0.61
GCFC2-201ENST00000321027 WFDC9Q8NEX5 89 aa11.25□□□□□ -0.61
GCFC2-201ENST00000321027 NDUFV3P56181 108 aaKnown RBP11.25□□□□□ -0.61
GCFC2-201ENST00000321027 HECTD1Q9ULT8 2610 aa11.25□□□□□ -0.61
GCFC2-201ENST00000321027 NDUFB1O75438 58 aa11.25□□□□□ -0.61
GCFC2-201ENST00000321027 MP68P56378 58 aa11.25□□□□□ -0.61
GCFC2-201ENST00000321027 SPATA25Q9BR10 227 aa11.25□□□□□ -0.61
GCFC2-201ENST00000321027 WFDC10AQ9H1F0 79 aa11.25□□□□□ -0.61
GCFC2-201ENST00000321027 CRIP2P52943 208 aaPredicted RBP11.24□□□□□ -0.61
GCFC2-201ENST00000321027 C20orf197Q8N268 126 aa11.24□□□□□ -0.61
GCFC2-201ENST00000321027 HIGD2AQ9BW72 106 aa11.24□□□□□ -0.61
GCFC2-201ENST00000321027 UBE2D4Q9Y2X8 147 aa11.24□□□□□ -0.61
GCFC2-201ENST00000321027 A0A096LNI7 61 aa11.23□□□□□ -0.61
GCFC2-201ENST00000321027 NDUFA7O95182 113 aa11.23□□□□□ -0.61
GCFC2-201ENST00000321027 TRBV6-8A0A0A6YYG3 113 aa11.23□□□□□ -0.61
GCFC2-201ENST00000321027 J3KT08 172 aa11.23□□□□□ -0.61
GCFC2-201ENST00000321027 LINC00526Q96FQ7 95 aa11.23□□□□□ -0.61
GCFC2-201ENST00000321027 SCXQ7RTU7 201 aa11.22□□□□□ -0.61
GCFC2-201ENST00000321027 C6orf99Q4VX62 202 aa11.22□□□□□ -0.61
GCFC2-201ENST00000321027 FAM110AQ9BQ89 295 aa11.22□□□□□ -0.61
GCFC2-201ENST00000321027 LOC100131303A0A0U1RQF7 123 aa11.21□□□□□ -0.61
GCFC2-201ENST00000321027 MRPS36P82909 103 aaKnown RBP11.21□□□□□ -0.61
GCFC2-201ENST00000321027 IBA57-AS1B1ANH7 110 aa11.21□□□□□ -0.62
GCFC2-201ENST00000321027 BPY2O14599 106 aa11.2□□□□□ -0.62
GCFC2-201ENST00000321027 PLA2G2AP14555 144 aa11.2□□□□□ -0.62
GCFC2-201ENST00000321027 LY6G6DO95868 133 aa11.2□□□□□ -0.62
GCFC2-201ENST00000321027 PDE6GP18545 87 aa11.2□□□□□ -0.62
GCFC2-201ENST00000321027 C11orf45Q8TAV5 145 aa11.2□□□□□ -0.62
GCFC2-201ENST00000321027 UPK3BQ9BT76 320 aa11.2□□□□□ -0.62
GCFC2-201ENST00000321027 H3BQ85 93 aa11.19□□□□□ -0.62
GCFC2-201ENST00000321027 SMR3AQ99954 134 aa11.19□□□□□ -0.62
GCFC2-201ENST00000321027 FRYQ5TBA9 3013 aa11.19□□□□□ -0.62
GCFC2-201ENST00000321027 FRYLO94915 3013 aa11.18□□□□□ -0.62
GCFC2-201ENST00000321027 UBE2D3P61077 147 aa11.18□□□□□ -0.62
GCFC2-201ENST00000321027 UBE2D2P62837 147 aa11.18□□□□□ -0.62
GCFC2-201ENST00000321027 TRBV6-4A0A1B0GX49 114 aa11.18□□□□□ -0.62
GCFC2-201ENST00000321027 LST1O00453 97 aa11.17□□□□□ -0.62
GCFC2-201ENST00000321027 ADAMTSL4-AS1Q5T5F5 129 aa11.17□□□□□ -0.62
GCFC2-201ENST00000321027 LYRM9A8MSI8 78 aa11.17□□□□□ -0.62
GCFC2-201ENST00000321027 H7C423 109 aa11.17□□□□□ -0.62
GCFC2-201ENST00000321027 KIF25-AS1Q9Y6Z4 181 aa11.17□□□□□ -0.62
GCFC2-201ENST00000321027 H0Y9J4 135 aa11.17□□□□□ -0.62
GCFC2-201ENST00000321027 SMIM9A6NGZ8 99 aa11.16□□□□□ -0.62
GCFC2-201ENST00000321027 ENHOQ6UWT2 76 aa11.16□□□□□ -0.62
GCFC2-201ENST00000321027 DEFB131BA0A096LNP1 70 aa11.15□□□□□ -0.62
GCFC2-201ENST00000321027 HILS1P60008 231 aa11.15□□□□□ -0.62
GCFC2-201ENST00000321027 LINC00242Q5T6M2 205 aa11.15□□□□□ -0.62
GCFC2-201ENST00000321027 ODF3L2Q3SX64 289 aa11.15□□□□□ -0.62
GCFC2-201ENST00000321027 Q6ZSN1 163 aa11.15□□□□□ -0.63
GCFC2-201ENST00000321027 UQCRQO14949 82 aa11.13□□□□□ -0.63
GCFC2-201ENST00000321027 ATRQ13535 2644 aa11.13□□□□□ -0.63
GCFC2-201ENST00000321027 TIMM17BO60830 172 aa11.13□□□□□ -0.63
GCFC2-201ENST00000321027 LINC00694P0DN24 101 aa11.13□□□□□ -0.63
GCFC2-201ENST00000321027 LINC00315P59091 139 aa11.12□□□□□ -0.63
GCFC2-201ENST00000321027 Q6ZQY7 126 aa11.12□□□□□ -0.63
GCFC2-201ENST00000321027 CHCHD7Q9BUK0 85 aa11.12□□□□□ -0.63
GCFC2-201ENST00000321027 PKIGQ9Y2B9 76 aa11.12□□□□□ -0.63
GCFC2-201ENST00000321027 COX6A2Q02221 97 aa11.12□□□□□ -0.63
GCFC2-201ENST00000321027 BRI3O95415 125 aa11.11□□□□□ -0.63
GCFC2-201ENST00000321027 CHKB-CPT1BH3BT56 60 aa11.11□□□□□ -0.63
GCFC2-201ENST00000321027 C1orf158Q8N1D5 194 aa11.11□□□□□ -0.63
GCFC2-201ENST00000321027 CDC42SE2Q9NRR3 84 aa11.11□□□□□ -0.63
GCFC2-201ENST00000321027 LINC01546A6NGU7 62 aa11.1□□□□□ -0.63
GCFC2-201ENST00000321027 CCKP06307 115 aa11.1□□□□□ -0.63
GCFC2-201ENST00000321027 AMELXQ99217 191 aa11.1□□□□□ -0.63
GCFC2-201ENST00000321027 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.09□□□□□ -0.63
GCFC2-201ENST00000321027 IGKV2-28A0A075B6P5 120 aa11.09□□□□□ -0.63
GCFC2-201ENST00000321027 IGKV2D-28P01615 120 aa11.09□□□□□ -0.63
GCFC2-201ENST00000321027 MGAM2Q2M2H8 2515 aa11.09□□□□□ -0.63
GCFC2-201ENST00000321027 LINC00959A0A1B0GUT2 108 aa11.08□□□□□ -0.63
GCFC2-201ENST00000321027 SMIM1B2RUZ4 78 aa11.08□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms