RNA–Protein interactions for RNA: ENST00000315781.9

SNAP47-201, Transcript of synaptosome associated protein 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNAP47, Length 2,367 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-201ENST00000315781 FAM110AQ9BQ89 295 aa13.26□□□□□ -0.29
SNAP47-201ENST00000315781 COX6CP09669 75 aa13.25□□□□□ -0.29
SNAP47-201ENST00000315781 LINC00308Q8TCZ7 52 aa13.25□□□□□ -0.29
SNAP47-201ENST00000315781 TRGV4A0A0C4DH28 118 aa13.24□□□□□ -0.29
SNAP47-201ENST00000315781 NTN5Q8WTR8 489 aaPredicted RBP13.24□□□□□ -0.29
SNAP47-201ENST00000315781 TRBV10-2A0A0K0K1G8 114 aa13.23□□□□□ -0.29
SNAP47-201ENST00000315781 TRBV6-4A0A1B0GX49 114 aa13.23□□□□□ -0.29
SNAP47-201ENST00000315781 F5H768 121 aa13.23□□□□□ -0.29
SNAP47-201ENST00000315781 PRIMA1Q86XR5 153 aa13.23□□□□□ -0.29
SNAP47-201ENST00000315781 CLEC2BQ92478 149 aa13.23□□□□□ -0.29
SNAP47-201ENST00000315781 OVOL2Q9BRP0 275 aa13.23□□□□□ -0.29
SNAP47-201ENST00000315781 MT-ATP8P03928 68 aa13.22□□□□□ -0.29
SNAP47-201ENST00000315781 XGP55808 180 aa13.22□□□□□ -0.29
SNAP47-201ENST00000315781 MEIG1Q5JSS6 88 aa13.22□□□□□ -0.29
SNAP47-201ENST00000315781 UNC79Q9P2D8 2635 aa13.22□□□□□ -0.29
SNAP47-201ENST00000315781 HILS1P60008 231 aa13.22□□□□□ -0.29
SNAP47-201ENST00000315781 HELZ2Q9BYK8 2649 aaKnown RBP13.21□□□□□ -0.29
SNAP47-201ENST00000315781 GAGE6Q13070 117 aa13.2□□□□□ -0.3
SNAP47-201ENST00000315781 IGKV3OR2-268A0A0C4DH90 116 aa13.19□□□□□ -0.3
SNAP47-201ENST00000315781 TEX49A0A1B0GTD5 131 aa13.19□□□□□ -0.3
SNAP47-201ENST00000315781 H7C423 109 aa13.19□□□□□ -0.3
SNAP47-201ENST00000315781 C2orf82Q6UX34 121 aa13.19□□□□□ -0.3
SNAP47-201ENST00000315781 SOSTDC1Q6X4U4 206 aa13.19□□□□□ -0.3
SNAP47-201ENST00000315781 FHL2Q14192 279 aa13.18□□□□□ -0.3
SNAP47-201ENST00000315781 LST1O00453 97 aa13.18□□□□□ -0.3
SNAP47-201ENST00000315781 TMEM262E9PQX1 116 aa13.17□□□□□ -0.3
SNAP47-201ENST00000315781 COPS9Q8WXC6 57 aa13.17□□□□□ -0.3
SNAP47-201ENST00000315781 LINC01600Q96MT4 127 aa13.17□□□□□ -0.3
SNAP47-201ENST00000315781 HERV-K104P63124 156 aa13.16□□□□□ -0.3
SNAP47-201ENST00000315781 SMR3AQ99954 134 aa13.16□□□□□ -0.3
SNAP47-201ENST00000315781 TRBV6-8A0A0A6YYG3 113 aa13.16□□□□□ -0.3
SNAP47-201ENST00000315781 CHCHD5Q9BSY4 110 aa13.16□□□□□ -0.3
SNAP47-201ENST00000315781 HIVEP2P31629 2446 aa13.15□□□□□ -0.3
SNAP47-201ENST00000315781 IGLV4-60A0A075B6I1 120 aa13.15□□□□□ -0.3
SNAP47-201ENST00000315781 DEFB130BP0DP73 79 aa13.15□□□□□ -0.3
SNAP47-201ENST00000315781 DEFB130AP0DP74 79 aa13.15□□□□□ -0.3
SNAP47-201ENST00000315781 UBE2WQ96B02 151 aa13.15□□□□□ -0.3
SNAP47-201ENST00000315781 FASNP49327 2511 aaKnown RBP13.14□□□□□ -0.31
SNAP47-201ENST00000315781 A0A1B0GV72 72 aa13.14□□□□□ -0.31
SNAP47-201ENST00000315781 PF4P02776 101 aa13.14□□□□□ -0.31
SNAP47-201ENST00000315781 KRTAP10-3P60369 221 aa13.14□□□□□ -0.31
SNAP47-201ENST00000315781 GCN1Q92616 2671 aaKnown RBP13.14□□□□□ -0.31
SNAP47-201ENST00000315781 H3BT86 120 aa13.14□□□□□ -0.31
SNAP47-201ENST00000315781 J3QKU1 62 aa13.13□□□□□ -0.31
SNAP47-201ENST00000315781 CKS1BP61024 79 aa13.13□□□□□ -0.31
SNAP47-201ENST00000315781 TOMM7Q9P0U1 55 aa13.13□□□□□ -0.31
SNAP47-201ENST00000315781 FN1P02751 2386 aaKnown RBP13.13□□□□□ -0.31
SNAP47-201ENST00000315781 COX7B2Q8TF08 81 aa13.13□□□□□ -0.31
SNAP47-201ENST00000315781 CRLF1O75462 422 aa13.12□□□□□ -0.31
SNAP47-201ENST00000315781 NBEAL2Q6ZNJ1 2754 aa13.11□□□□□ -0.31
SNAP47-201ENST00000315781 TRAV8-4A0A0B4J246 113 aa13.09□□□□□ -0.31
SNAP47-201ENST00000315781 SHISA2Q6UWI4 295 aa13.09□□□□□ -0.31
SNAP47-201ENST00000315781 LINC00482Q8N8I6 264 aa13.09□□□□□ -0.31
SNAP47-201ENST00000315781 COX7A2LO14548 114 aa13.09□□□□□ -0.31
SNAP47-201ENST00000315781 VWFP04275 2813 aa13.09□□□□□ -0.31
SNAP47-201ENST00000315781 KIR2DL5BQ8NHK3 375 aa13.08□□□□□ -0.32
SNAP47-201ENST00000315781 IGHV3OR16-9A0A0B4J2B5 98 aa13.07□□□□□ -0.32
SNAP47-201ENST00000315781 GYPEP15421 78 aa13.07□□□□□ -0.32
SNAP47-201ENST00000315781 MIR7-3HGQ8N6C7 128 aa13.07□□□□□ -0.32
SNAP47-201ENST00000315781 C5orf38Q86SI9 138 aa13.06□□□□□ -0.32
SNAP47-201ENST00000315781 LINC00612Q8N6U2 182 aa13.05□□□□□ -0.32
SNAP47-201ENST00000315781 TRAV26-1A0A087WT03 109 aa13.04□□□□□ -0.32
SNAP47-201ENST00000315781 A0A087WZ39 114 aa13.04□□□□□ -0.32
SNAP47-201ENST00000315781 LINC00158P58513 81 aa13.04□□□□□ -0.32
SNAP47-201ENST00000315781 PPDPFQ9H3Y8 114 aa13.04□□□□□ -0.32
SNAP47-201ENST00000315781 X6R8D5 127 aa13.04□□□□□ -0.32
SNAP47-201ENST00000315781 NOTCH2Q04721 2471 aa13.04□□□□□ -0.32
SNAP47-201ENST00000315781 LINC00959A0A1B0GUT2 108 aa13.03□□□□□ -0.32
SNAP47-201ENST00000315781 SNCGO76070 127 aa13.03□□□□□ -0.32
SNAP47-201ENST00000315781 HECTD1Q9ULT8 2610 aa13.02□□□□□ -0.32
SNAP47-201ENST00000315781 CITED1Q99966 193 aa13.02□□□□□ -0.32
SNAP47-201ENST00000315781 SND1-IT1Q9HBX3 110 aa13.02□□□□□ -0.32
SNAP47-201ENST00000315781 A0A096LPF7 62 aa13.02□□□□□ -0.33
SNAP47-201ENST00000315781 TRAV13-2A0A0B4J235 113 aa13.02□□□□□ -0.33
SNAP47-201ENST00000315781 CRPP02741 224 aa13.02□□□□□ -0.33
SNAP47-201ENST00000315781 SPATA3Q8NHX4 192 aa13.02□□□□□ -0.33
SNAP47-201ENST00000315781 KMT2BQ9UMN6 2715 aaPredicted RBP13.01□□□□□ -0.33
SNAP47-201ENST00000315781 LY6G6DO95868 133 aa13.01□□□□□ -0.33
SNAP47-201ENST00000315781 IGKV2-28A0A075B6P5 120 aa13□□□□□ -0.33
SNAP47-201ENST00000315781 IGKV2D-28P01615 120 aa13□□□□□ -0.33
SNAP47-201ENST00000315781 XCL1P47992 114 aa13□□□□□ -0.33
SNAP47-201ENST00000315781 LINC00337Q8N6G1 96 aa13□□□□□ -0.33
SNAP47-201ENST00000315781 PFN2P35080 140 aa13□□□□□ -0.33
SNAP47-201ENST00000315781 DEFB121Q5J5C9 76 aa13□□□□□ -0.33
SNAP47-201ENST00000315781 C11orf68Q9H3H3 251 aaKnown RBP13□□□□□ -0.33
SNAP47-201ENST00000315781 PRO0255Q9UI72 69 aa13□□□□□ -0.33
SNAP47-201ENST00000315781 FAM222AQ5U5X8 452 aa12.99□□□□□ -0.33
SNAP47-201ENST00000315781 FAM218AQ96MZ4 157 aa12.99□□□□□ -0.33
SNAP47-201ENST00000315781 SMIM9A6NGZ8 99 aa12.99□□□□□ -0.33
SNAP47-201ENST00000315781 IBA57-AS1B1ANH7 110 aa12.99□□□□□ -0.33
SNAP47-201ENST00000315781 CLPSL2Q6UWE3 100 aa12.99□□□□□ -0.33
SNAP47-201ENST00000315781 TRACP01848 142 aa12.98□□□□□ -0.33
SNAP47-201ENST00000315781 CCL18P55774 89 aa12.98□□□□□ -0.33
SNAP47-201ENST00000315781 C15orf53Q8NAA6 179 aa12.98□□□□□ -0.33
SNAP47-201ENST00000315781 DEFB4AO15263 64 aa12.97□□□□□ -0.33
SNAP47-201ENST00000315781 GAGE2BQ13066 116 aa12.97□□□□□ -0.33
SNAP47-201ENST00000315781 GAGE2EQ4V326 116 aa12.97□□□□□ -0.33
SNAP47-201ENST00000315781 C6orf226Q5I0X4 101 aa12.97□□□□□ -0.33
SNAP47-201ENST00000315781 GAGE2DQ9UEU5 116 aa12.97□□□□□ -0.33
SNAP47-201ENST00000315781 RPL28P46779 137 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms