RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 K7EQD1 137 aa9.55□□□□□ -0.88
SKA3-202ENST00000314759 C5orf38Q86SI9 138 aa9.55□□□□□ -0.88
SKA3-202ENST00000314759 TEX15Q9BXT5 2789 aa9.55□□□□□ -0.88
SKA3-202ENST00000314759 TRBV10-1A0A0K0K1A3 114 aa9.55□□□□□ -0.88
SKA3-202ENST00000314759 WNK1Q9H4A3 2382 aa9.54□□□□□ -0.88
SKA3-202ENST00000314759 C9orf129Q5T035 196 aaKnown RBP9.54□□□□□ -0.88
SKA3-202ENST00000314759 STHQ8IWL8 128 aa9.54□□□□□ -0.88
SKA3-202ENST00000314759 C2orf48Q96LS8 159 aa9.54□□□□□ -0.88
SKA3-202ENST00000314759 IGSF10Q6WRI0 2623 aa9.53□□□□□ -0.88
SKA3-202ENST00000314759 IGHV4-31P0DP07 118 aa9.53□□□□□ -0.88
SKA3-202ENST00000314759 CYSTM1Q9H1C7 97 aa9.53□□□□□ -0.88
SKA3-202ENST00000314759 HIST2H2BCQ6DN03 193 aa9.52□□□□□ -0.88
SKA3-202ENST00000314759 CACNA1AO00555 2505 aa9.52□□□□□ -0.89
SKA3-202ENST00000314759 AKAP9Q99996 3911 aa9.52□□□□□ -0.89
SKA3-202ENST00000314759 FAM208BQ5VWN6 2430 aa9.52□□□□□ -0.89
SKA3-202ENST00000314759 PTPN13Q12923 2485 aa9.52□□□□□ -0.89
SKA3-202ENST00000314759 COX7CP15954 63 aa9.52□□□□□ -0.89
SKA3-202ENST00000314759 MALP21145 153 aa9.51□□□□□ -0.89
SKA3-202ENST00000314759 CXCL5P42830 114 aa9.51□□□□□ -0.89
SKA3-202ENST00000314759 LINC00337Q8N6G1 96 aa9.51□□□□□ -0.89
SKA3-202ENST00000314759 EPG5Q9HCE0 2579 aa9.5□□□□□ -0.89
SKA3-202ENST00000314759 TLN2Q9Y4G6 2542 aa9.5□□□□□ -0.89
SKA3-202ENST00000314759 hADV29S1A0JD25 119 aa9.5□□□□□ -0.89
SKA3-202ENST00000314759 UBE2L6O14933 153 aa9.5□□□□□ -0.89
SKA3-202ENST00000314759 RPL28P46779 137 aaKnown RBP9.5□□□□□ -0.89
SKA3-202ENST00000314759 FAM222AQ5U5X8 452 aa9.5□□□□□ -0.89
SKA3-202ENST00000314759 MIR7-3HGQ8N6C7 128 aa9.5□□□□□ -0.89
SKA3-202ENST00000314759 TMEM243Q9BU79 118 aa9.5□□□□□ -0.89
SKA3-202ENST00000314759 NOP10Q9NPE3 64 aaKnown RBP9.5□□□□□ -0.89
SKA3-202ENST00000314759 ZFYVE26Q68DK2 2539 aa9.5□□□□□ -0.89
SKA3-202ENST00000314759 IGKV2-28A0A075B6P5 120 aa9.49□□□□□ -0.89
SKA3-202ENST00000314759 TRAV13-2A0A0B4J235 113 aa9.49□□□□□ -0.89
SKA3-202ENST00000314759 IGKV2D-28P01615 120 aa9.49□□□□□ -0.89
SKA3-202ENST00000314759 A0A087WYN8 130 aa9.49□□□□□ -0.89
SKA3-202ENST00000314759 PF4P02776 101 aa9.49□□□□□ -0.89
SKA3-202ENST00000314759 HIST1H4AP62805 103 aaKnown RBP9.49□□□□□ -0.89
SKA3-202ENST00000314759 CR1P17927 2039 aa9.49□□□□□ -0.89
SKA3-202ENST00000314759 JMJD1CQ15652 2540 aa9.49□□□□□ -0.89
SKA3-202ENST00000314759 ATP5G1P05496 136 aa9.49□□□□□ -0.89
SKA3-202ENST00000314759 C14orf132Q9NPU4 83 aa9.49□□□□□ -0.89
SKA3-202ENST00000314759 NAV2Q8IVL1 2488 aa9.48□□□□□ -0.89
SKA3-202ENST00000314759 IGKV3D-7A0A0C4DH55 119 aa9.48□□□□□ -0.89
SKA3-202ENST00000314759 LOC100131303A0A0U1RQF7 123 aa9.48□□□□□ -0.89
SKA3-202ENST00000314759 CRPP02741 224 aa9.48□□□□□ -0.89
SKA3-202ENST00000314759 INAFM2P0DMQ5 153 aa9.48□□□□□ -0.89
SKA3-202ENST00000314759 COX7B2Q8TF08 81 aa9.48□□□□□ -0.89
SKA3-202ENST00000314759 FAM19A5Q7Z5A7 132 aaPredicted RBP9.48□□□□□ -0.89
SKA3-202ENST00000314759 SND1-IT1Q9HBX3 110 aa9.48□□□□□ -0.89
SKA3-202ENST00000314759 ABCA12Q86UK0 2595 aa9.48□□□□□ -0.89
SKA3-202ENST00000314759 LRRK2Q5S007 2527 aa9.47□□□□□ -0.89
SKA3-202ENST00000314759 TOMM7Q9P0U1 55 aa9.47□□□□□ -0.89
SKA3-202ENST00000314759 ZNF469Q96JG9 3925 aaPredicted RBP9.47□□□□□ -0.89
SKA3-202ENST00000314759 NBPF19A0A087WUL8 3843 aa9.47□□□□□ -0.89
SKA3-202ENST00000314759 TRAV25A0A0B4J276 109 aa9.47□□□□□ -0.89
SKA3-202ENST00000314759 C11orf44Q8N8P7 122 aa9.47□□□□□ -0.89
SKA3-202ENST00000314759 NIPBLQ6KC79 2804 aaeCLIP9.46□□□□□ -0.89
SKA3-202ENST00000314759 A0A087WVE0 104 aa9.46□□□□□ -0.89
SKA3-202ENST00000314759 IGKV3OR2-268A0A0C4DH90 116 aa9.46□□□□□ -0.89
SKA3-202ENST00000314759 CRYGAP11844 174 aa9.46□□□□□ -0.89
SKA3-202ENST00000314759 SMIM11BQ8TCY0 68 aa9.46□□□□□ -0.9
SKA3-202ENST00000314759 NF1P21359 2839 aa9.46□□□□□ -0.9
SKA3-202ENST00000314759 A0A1W2PRX2 142 aa9.45□□□□□ -0.9
SKA3-202ENST00000314759 PLAC8L1A1L4L8 177 aa9.45□□□□□ -0.9
SKA3-202ENST00000314759 GIG44P09565 113 aaPredicted RBP9.45□□□□□ -0.9
SKA3-202ENST00000314759 LINC00846Q9NV44 126 aa9.45□□□□□ -0.9
SKA3-202ENST00000314759 SONP18583 2426 aaKnown RBP9.45□□□□□ -0.9
SKA3-202ENST00000314759 J3KT08 172 aa9.45□□□□□ -0.9
SKA3-202ENST00000314759 LINC00158P58513 81 aa9.45□□□□□ -0.9
SKA3-202ENST00000314759 IGLV4-60A0A075B6I1 120 aa9.44□□□□□ -0.9
SKA3-202ENST00000314759 TRGV2A0A075B6R0 118 aa9.44□□□□□ -0.9
SKA3-202ENST00000314759 ATOX1O00244 68 aa9.44□□□□□ -0.9
SKA3-202ENST00000314759 DNAL4O96015 105 aa9.44□□□□□ -0.9
SKA3-202ENST00000314759 LRRC75A-AS1Q8N1F1 130 aa9.44□□□□□ -0.9
SKA3-202ENST00000314759 SETXQ7Z333 2677 aaKnown RBP9.44□□□□□ -0.9
SKA3-202ENST00000314759 A0A1B0GX51 115 aa9.44□□□□□ -0.9
SKA3-202ENST00000314759 CCL18P55774 89 aa9.44□□□□□ -0.9
SKA3-202ENST00000314759 KIR2DL5BQ8NHK3 375 aa9.44□□□□□ -0.9
SKA3-202ENST00000314759 SETD2Q9BYW2 2564 aaPredicted RBP9.43□□□□□ -0.9
SKA3-202ENST00000314759 IGHV3OR16-9A0A0B4J2B5 98 aa9.43□□□□□ -0.9
SKA3-202ENST00000314759 KRTAP10-9P60411 292 aa9.43□□□□□ -0.9
SKA3-202ENST00000314759 RPL18AQ02543 176 aaKnown RBP9.43□□□□□ -0.9
SKA3-202ENST00000314759 TRBV6-4A0A1B0GX49 114 aa9.42□□□□□ -0.9
SKA3-202ENST00000314759 CCL24O00175 119 aa9.42□□□□□ -0.9
SKA3-202ENST00000314759 NCR3O14931 201 aa9.42□□□□□ -0.9
SKA3-202ENST00000314759 PLA2G2AP14555 144 aa9.42□□□□□ -0.9
SKA3-202ENST00000314759 SLPIP03973 132 aa9.42□□□□□ -0.9
SKA3-202ENST00000314759 OVOL2Q9BRP0 275 aa9.42□□□□□ -0.9
SKA3-202ENST00000314759 WFDC10AQ9H1F0 79 aa9.42□□□□□ -0.9
SKA3-202ENST00000314759 SMIM9A6NGZ8 99 aa9.41□□□□□ -0.9
SKA3-202ENST00000314759 LINC01561Q8N1V8 128 aa9.41□□□□□ -0.9
SKA3-202ENST00000314759 PFN2P35080 140 aa9.41□□□□□ -0.9
SKA3-202ENST00000314759 C16orf74Q96GX8 76 aa9.41□□□□□ -0.9
SKA3-202ENST00000314759 TRBV6-8A0A0A6YYG3 113 aa9.4□□□□□ -0.9
SKA3-202ENST00000314759 LECT2O14960 151 aa9.4□□□□□ -0.9
SKA3-202ENST00000314759 TRGV4A0A0C4DH28 118 aa9.4□□□□□ -0.9
SKA3-202ENST00000314759 IBA57-AS1B1ANH7 110 aa9.4□□□□□ -0.9
SKA3-202ENST00000314759 H0YGX0 51 aa9.4□□□□□ -0.9
SKA3-202ENST00000314759 A0A087WZ39 114 aa9.39□□□□□ -0.91
SKA3-202ENST00000314759 ZNF462Q96JM2 2506 aa9.39□□□□□ -0.91
SKA3-202ENST00000314759 RPL35AP18077 110 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 236.8 ms