RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 GNRH2O43555 120 aa2.96□□□□□ -1.94
USH2A-201ENST00000307340 RBX1P62877 108 aa2.96□□□□□ -1.94
USH2A-201ENST00000307340 A0A0J9YXV3 536 aa2.96□□□□□ -1.94
USH2A-201ENST00000307340 LOC110117498A0A087WWA1 95 aa2.96□□□□□ -1.94
USH2A-201ENST00000307340 IGHV4-28A0A0C4DH34 117 aa2.96□□□□□ -1.94
USH2A-201ENST00000307340 Q8N9L7 120 aa2.96□□□□□ -1.94
USH2A-201ENST00000307340 SPATA3Q8NHX4 192 aa2.96□□□□□ -1.94
USH2A-201ENST00000307340 ZNF295-AS1Q8N0V1 137 aa2.96□□□□□ -1.94
USH2A-201ENST00000307340 CDC42SE2Q9NRR3 84 aa2.96□□□□□ -1.94
USH2A-201ENST00000307340 RNASE3P12724 160 aaKnown RBP2.96□□□□□ -1.94
USH2A-201ENST00000307340 RPL35AP18077 110 aaKnown RBP2.96□□□□□ -1.94
USH2A-201ENST00000307340 GVQW2A0A096LPI5 108 aaPredicted RBP2.95□□□□□ -1.94
USH2A-201ENST00000307340 MRPS12O15235 138 aaKnown RBP2.95□□□□□ -1.94
USH2A-201ENST00000307340 ASPHD1Q5U4P2 390 aa2.95□□□□□ -1.94
USH2A-201ENST00000307340 WFDC9Q8NEX5 89 aa2.95□□□□□ -1.94
USH2A-201ENST00000307340 IGHV3-73A0A0B4J1V6 119 aa2.95□□□□□ -1.94
USH2A-201ENST00000307340 NUPR1O60356 82 aa2.95□□□□□ -1.94
USH2A-201ENST00000307340 IGLV1-51P01701 117 aa2.95□□□□□ -1.94
USH2A-201ENST00000307340 HTN3P15516 51 aa2.95□□□□□ -1.94
USH2A-201ENST00000307340 CRIP3Q6Q6R5 217 aa2.95□□□□□ -1.94
USH2A-201ENST00000307340 RPL39LQ96EH5 51 aaKnown RBP2.95□□□□□ -1.94
USH2A-201ENST00000307340 TEX49A0A1B0GTD5 131 aa2.95□□□□□ -1.94
USH2A-201ENST00000307340 CCDC179H3BU77 68 aa2.95□□□□□ -1.94
USH2A-201ENST00000307340 PKD1L2Q7Z442 2459 aa2.95□□□□□ -1.94
USH2A-201ENST00000307340 LINC01600Q96MT4 127 aa2.95□□□□□ -1.94
USH2A-201ENST00000307340 NTM-AS1Q6ZSK4 140 aa2.95□□□□□ -1.94
USH2A-201ENST00000307340 WFDC2Q14508 124 aa2.94□□□□□ -1.94
USH2A-201ENST00000307340 MLANAQ16655 118 aa2.94□□□□□ -1.94
USH2A-201ENST00000307340 C5orf42Q9H799 3197 aa2.94□□□□□ -1.94
USH2A-201ENST00000307340 IGHV4-61A0A0C4DH41 118 aa2.94□□□□□ -1.94
USH2A-201ENST00000307340 A6NED7 52 aa2.94□□□□□ -1.94
USH2A-201ENST00000307340 CYP4F30PQ9H0H9 118 aa2.94□□□□□ -1.94
USH2A-201ENST00000307340 K7ERJ3 54 aa2.94□□□□□ -1.94
USH2A-201ENST00000307340 ELOF1P60002 83 aaKnown RBP2.94□□□□□ -1.94
USH2A-201ENST00000307340 CHCHD10Q8WYQ3 142 aaPredicted RBP2.94□□□□□ -1.94
USH2A-201ENST00000307340 ZFP36P26651 326 aaKnown RBP2.94□□□□□ -1.94
USH2A-201ENST00000307340 IGLV5-39A0A0G2JS06 123 aa2.94□□□□□ -1.94
USH2A-201ENST00000307340 SYCNQ0VAF6 134 aa2.94□□□□□ -1.94
USH2A-201ENST00000307340 BRWD1-AS2P59051 145 aa2.94□□□□□ -1.94
USH2A-201ENST00000307340 CRYGDP07320 174 aa2.94□□□□□ -1.94
USH2A-201ENST00000307340 RPL39P62891 51 aaKnown RBP2.94□□□□□ -1.94
USH2A-201ENST00000307340 LINC00269Q8N2A0 174 aa2.94□□□□□ -1.94
USH2A-201ENST00000307340 SCXQ7RTU7 201 aa2.93□□□□□ -1.94
USH2A-201ENST00000307340 IGHV3OR16-8A0A075B7F1 116 aa2.93□□□□□ -1.94
USH2A-201ENST00000307340 FAM19A4Q96LR4 140 aa2.93□□□□□ -1.94
USH2A-201ENST00000307340 TNRC18O15417 2968 aaPredicted RBP2.93□□□□□ -1.94
USH2A-201ENST00000307340 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.93□□□□□ -1.94
USH2A-201ENST00000307340 IGKV2-29A2NJV5 120 aaPredicted RBP2.93□□□□□ -1.94
USH2A-201ENST00000307340 TSHBP01222 138 aa2.93□□□□□ -1.94
USH2A-201ENST00000307340 CRIP1P50238 77 aa2.93□□□□□ -1.94
USH2A-201ENST00000307340 DEFB121Q5J5C9 76 aa2.93□□□□□ -1.94
USH2A-201ENST00000307340 UTRNP46939 3433 aa2.93□□□□□ -1.94
USH2A-201ENST00000307340 CHD8Q9HCK8 2581 aa2.93□□□□□ -1.94
USH2A-201ENST00000307340 IGLV2-18A0A075B6J9 118 aa2.93□□□□□ -1.94
USH2A-201ENST00000307340 CLEC2BQ92478 149 aa2.93□□□□□ -1.94
USH2A-201ENST00000307340 CD164Q04900 197 aa2.93□□□□□ -1.94
USH2A-201ENST00000307340 C14orf132Q9NPU4 83 aa2.93□□□□□ -1.94
USH2A-201ENST00000307340 CDKN2A-AS1Q9UH64 79 aa2.93□□□□□ -1.94
USH2A-201ENST00000307340 LYNX1G3V0Z9 82 aa2.93□□□□□ -1.94
USH2A-201ENST00000307340 SBSPONQ8IVN8 264 aa2.93□□□□□ -1.94
USH2A-201ENST00000307340 MDFIQ99750 246 aa2.93□□□□□ -1.94
USH2A-201ENST00000307340 LINC00205P59089 165 aa2.93□□□□□ -1.94
USH2A-201ENST00000307340 TRBV7-4A0A0J9YYF1 115 aa2.92□□□□□ -1.94
USH2A-201ENST00000307340 UNQ9165/PRO28630Q6UXU0 137 aa2.92□□□□□ -1.94
USH2A-201ENST00000307340 ZNF581Q9P0T4 197 aa2.92□□□□□ -1.94
USH2A-201ENST00000307340 A0A0J9YWU9 116 aa2.92□□□□□ -1.94
USH2A-201ENST00000307340 IGHV4-30-4P0DP06 118 aa2.92□□□□□ -1.94
USH2A-201ENST00000307340 IGHV4-30-2A0A087WSY4 118 aa2.92□□□□□ -1.94
USH2A-201ENST00000307340 ZNF625Q96I27 306 aaPredicted RBP2.92□□□□□ -1.94
USH2A-201ENST00000307340 CHD7Q9P2D1 2997 aa2.92□□□□□ -1.94
USH2A-201ENST00000307340 NRGNQ92686 78 aa2.92□□□□□ -1.94
USH2A-201ENST00000307340 CELA1Q9UNI1 258 aa2.92□□□□□ -1.94
USH2A-201ENST00000307340 KLK12Q9UKR0 248 aa2.92□□□□□ -1.94
USH2A-201ENST00000307340 CR1P17927 2039 aa2.92□□□□□ -1.94
USH2A-201ENST00000307340 SMIM1B2RUZ4 78 aa2.92□□□□□ -1.94
USH2A-201ENST00000307340 RUSC1-AS1Q66K80 236 aa2.92□□□□□ -1.94
USH2A-201ENST00000307340 PLA2G5P39877 138 aa2.92□□□□□ -1.94
USH2A-201ENST00000307340 NOTCH2Q04721 2471 aa2.92□□□□□ -1.94
USH2A-201ENST00000307340 LINC00959A0A1B0GUT2 108 aa2.92□□□□□ -1.94
USH2A-201ENST00000307340 C6orf99Q4VX62 202 aa2.92□□□□□ -1.94
USH2A-201ENST00000307340 KLKP1Q107X0 134 aa2.92□□□□□ -1.94
USH2A-201ENST00000307340 REG3GQ6UW15 175 aa2.91□□□□□ -1.94
USH2A-201ENST00000307340 Q6ZSV7 163 aa2.91□□□□□ -1.94
USH2A-201ENST00000307340 IGHV4-38-2P0DP08 117 aa2.91□□□□□ -1.94
USH2A-201ENST00000307340 SPANXA2-OT1Q8N9U9 137 aa2.91□□□□□ -1.94
USH2A-201ENST00000307340 A0A0U1RRA0 63 aa2.91□□□□□ -1.94
USH2A-201ENST00000307340 SLURP1P55000 103 aa2.91□□□□□ -1.94
USH2A-201ENST00000307340 IGLV10-54A0A075B6I4 117 aa2.91□□□□□ -1.94
USH2A-201ENST00000307340 IGHV4-31P0DP07 118 aa2.91□□□□□ -1.94
USH2A-201ENST00000307340 MOBPQ13875 183 aa2.91□□□□□ -1.94
USH2A-201ENST00000307340 C20orf197Q8N268 126 aa2.91□□□□□ -1.94
USH2A-201ENST00000307340 SMIM11BQ8TCY0 68 aa2.91□□□□□ -1.94
USH2A-201ENST00000307340 H0Y9J4 135 aa2.91□□□□□ -1.94
USH2A-201ENST00000307340 VPS13AQ96RL7 3174 aa2.91□□□□□ -1.94
USH2A-201ENST00000307340 IGKV4-1P06312 121 aa2.91□□□□□ -1.94
USH2A-201ENST00000307340 MSRB1Q9NZV6 116 aa2.91□□□□□ -1.94
USH2A-201ENST00000307340 LINC00575Q6W349 94 aa2.91□□□□□ -1.94
USH2A-201ENST00000307340 LY6G6DO95868 133 aa2.91□□□□□ -1.94
USH2A-201ENST00000307340 SDIM1Q6ZPB5 146 aa2.91□□□□□ -1.94
USH2A-201ENST00000307340 LY6HO94772 140 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms