RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 SPANXB1Q9NS25 103 aaPredicted RBP8.32□□□□□ -1.08
TPM3-202ENST00000302206 COL7A1Q02388 2944 aa8.32□□□□□ -1.08
TPM3-202ENST00000302206 DNAH9Q9NYC9 4486 aa8.31□□□□□ -1.08
TPM3-202ENST00000302206 CCL25O15444 150 aa8.31□□□□□ -1.08
TPM3-202ENST00000302206 SCGB1D4Q6XE38 83 aa8.31□□□□□ -1.08
TPM3-202ENST00000302206 WWC2-AS2Q96NR7 200 aa8.31□□□□□ -1.08
TPM3-202ENST00000302206 SPATA25Q9BR10 227 aa8.31□□□□□ -1.08
TPM3-202ENST00000302206 CDKN2A-AS1Q9UH64 79 aa8.31□□□□□ -1.08
TPM3-202ENST00000302206 RYR2Q92736 4967 aa8.31□□□□□ -1.08
TPM3-202ENST00000302206 EPPK1P58107 5090 aaKnown RBP8.3□□□□□ -1.08
TPM3-202ENST00000302206 IGLV4-60A0A075B6I1 120 aa8.3□□□□□ -1.08
TPM3-202ENST00000302206 TRAV13-1A0A0B4J241 112 aa8.3□□□□□ -1.08
TPM3-202ENST00000302206 IGLV5-39A0A0G2JS06 123 aa8.3□□□□□ -1.08
TPM3-202ENST00000302206 K7EIL1 84 aa8.3□□□□□ -1.08
TPM3-202ENST00000302206 GCSHP23434 173 aa8.3□□□□□ -1.08
TPM3-202ENST00000302206 COX6A2Q02221 97 aa8.3□□□□□ -1.08
TPM3-202ENST00000302206 LELP1Q5T871 98 aa8.3□□□□□ -1.08
TPM3-202ENST00000302206 HIST1H4GQ99525 98 aa8.3□□□□□ -1.08
TPM3-202ENST00000302206 TM2D3Q9BRN9 247 aa8.3□□□□□ -1.08
TPM3-202ENST00000302206 A0A096LPF7 62 aa8.29□□□□□ -1.08
TPM3-202ENST00000302206 TAX1BP3O14907 124 aa8.29□□□□□ -1.08
TPM3-202ENST00000302206 SPINK8P0C7L1 97 aa8.29□□□□□ -1.08
TPM3-202ENST00000302206 HTN3P15516 51 aa8.29□□□□□ -1.08
TPM3-202ENST00000302206 RBX1P62877 108 aa8.29□□□□□ -1.08
TPM3-202ENST00000302206 ZFAND6Q6FIF0 208 aa8.29□□□□□ -1.08
TPM3-202ENST00000302206 COX11Q9Y6N1 276 aa8.29□□□□□ -1.08
TPM3-202ENST00000302206 BIRC6Q9NR09 4857 aa8.29□□□□□ -1.08
TPM3-202ENST00000302206 TRAV8-3A0A0A6YYJ7 113 aa8.28□□□□□ -1.08
TPM3-202ENST00000302206 A0A0J9YWU9 116 aa8.28□□□□□ -1.08
TPM3-202ENST00000302206 FXYD2P54710 66 aa8.28□□□□□ -1.08
TPM3-202ENST00000302206 IGHV3-64A0A075B6Q5 118 aa8.27□□□□□ -1.09
TPM3-202ENST00000302206 SMIM1B2RUZ4 78 aa8.27□□□□□ -1.09
TPM3-202ENST00000302206 TMEM262E9PQX1 116 aa8.27□□□□□ -1.09
TPM3-202ENST00000302206 SMIM13P0DJ93 91 aa8.27□□□□□ -1.09
TPM3-202ENST00000302206 PTTG1IPP53801 180 aa8.27□□□□□ -1.09
TPM3-202ENST00000302206 NDUFA12Q9UI09 145 aa8.27□□□□□ -1.09
TPM3-202ENST00000302206 A0A0J9YXY3 114 aa8.26□□□□□ -1.09
TPM3-202ENST00000302206 LINC00959A0A1B0GUT2 108 aa8.26□□□□□ -1.09
TPM3-202ENST00000302206 A0A1B0GWB2 263 aa8.26□□□□□ -1.09
TPM3-202ENST00000302206 TMEM238C9JI98 176 aa8.26□□□□□ -1.09
TPM3-202ENST00000302206 NDUFA1O15239 70 aa8.26□□□□□ -1.09
TPM3-202ENST00000302206 TIMM17BO60830 172 aa8.26□□□□□ -1.09
TPM3-202ENST00000302206 SRSF9Q13242 221 aaKnown RBP eCLIP8.26□□□□□ -1.09
TPM3-202ENST00000302206 Q6ZTC4 211 aa8.26□□□□□ -1.09
TPM3-202ENST00000302206 LINC01561Q8N1V8 128 aa8.26□□□□□ -1.09
TPM3-202ENST00000302206 C10orf126Q8N4M7 172 aa8.26□□□□□ -1.09
TPM3-202ENST00000302206 SVIPQ8NHG7 77 aa8.26□□□□□ -1.09
TPM3-202ENST00000302206 C11orf45Q8TAV5 145 aa8.26□□□□□ -1.09
TPM3-202ENST00000302206 IGHV3OR16-9A0A0B4J2B5 98 aa8.25□□□□□ -1.09
TPM3-202ENST00000302206 SS18Q15532 418 aa8.25□□□□□ -1.09
TPM3-202ENST00000302206 Q6ZVH6 145 aa8.25□□□□□ -1.09
TPM3-202ENST00000302206 A0A087WZ39 114 aa8.24□□□□□ -1.09
TPM3-202ENST00000302206 C9orf118A6NHY6 69 aa8.24□□□□□ -1.09
TPM3-202ENST00000302206 IGHV3-30P01768 117 aa8.24□□□□□ -1.09
TPM3-202ENST00000302206 IGHV3-30-5P0DP03 117 aa8.24□□□□□ -1.09
TPM3-202ENST00000302206 LYPD5Q6UWN5 251 aa8.24□□□□□ -1.09
TPM3-202ENST00000302206 NANOS2P60321 138 aaKnown RBP8.23□□□□□ -1.09
TPM3-202ENST00000302206 DEFB121Q5J5C9 76 aa8.23□□□□□ -1.09
TPM3-202ENST00000302206 SPANXDQ9BXN6 97 aa8.23□□□□□ -1.09
TPM3-202ENST00000302206 NHP2Q9NX24 153 aaKnown RBP8.23□□□□□ -1.09
TPM3-202ENST00000302206 SPANXCQ9NY87 97 aa8.23□□□□□ -1.09
TPM3-202ENST00000302206 DEFB131BA0A096LNP1 70 aa8.22□□□□□ -1.09
TPM3-202ENST00000302206 TRAV10A0A0B4J240 114 aa8.22□□□□□ -1.09
TPM3-202ENST00000302206 K7EP13 123 aa8.22□□□□□ -1.09
TPM3-202ENST00000302206 HERV-K104P63124 156 aa8.22□□□□□ -1.09
TPM3-202ENST00000302206 LITAFQ99732 161 aa8.22□□□□□ -1.09
TPM3-202ENST00000302206 SACSQ9NZJ4 4579 aa8.21□□□□□ -1.09
TPM3-202ENST00000302206 SFTA2Q6UW10 78 aa8.21□□□□□ -1.1
TPM3-202ENST00000302206 ZNF625Q96I27 306 aaPredicted RBP8.21□□□□□ -1.1
TPM3-202ENST00000302206 IGKV3OR2-268A0A0C4DH90 116 aa8.2□□□□□ -1.1
TPM3-202ENST00000302206 ANGP03950 147 aaKnown RBP8.2□□□□□ -1.1
TPM3-202ENST00000302206 IFITM1P13164 125 aa8.2□□□□□ -1.1
TPM3-202ENST00000302206 RPL24P83731 157 aaKnown RBP8.2□□□□□ -1.1
TPM3-202ENST00000302206 REG3AQ06141 175 aa8.2□□□□□ -1.1
TPM3-202ENST00000302206 CIRBPQ14011 172 aaKnown RBP8.2□□□□□ -1.1
TPM3-202ENST00000302206 CD164L2Q6UWJ8 174 aa8.2□□□□□ -1.1
TPM3-202ENST00000302206 LINC00269Q8N2A0 174 aa8.2□□□□□ -1.1
TPM3-202ENST00000302206 COX7B2Q8TF08 81 aa8.2□□□□□ -1.1
TPM3-202ENST00000302206 PPDPFQ9H3Y8 114 aa8.2□□□□□ -1.1
TPM3-202ENST00000302206 PRR34Q9NV39 138 aa8.2□□□□□ -1.1
TPM3-202ENST00000302206 MIAQ16674 131 aa8.19□□□□□ -1.1
TPM3-202ENST00000302206 C15orf53Q8NAA6 179 aa8.19□□□□□ -1.1
TPM3-202ENST00000302206 Q9H8V8 135 aa8.19□□□□□ -1.1
TPM3-202ENST00000302206 DYNC2H1Q8NCM8 4307 aaKnown RBP8.18□□□□□ -1.1
TPM3-202ENST00000302206 C3orf84H3BNL1 204 aa8.18□□□□□ -1.1
TPM3-202ENST00000302206 VAMP3Q15836 100 aa8.18□□□□□ -1.1
TPM3-202ENST00000302206 RAB37Q96AX2 223 aa8.18□□□□□ -1.1
TPM3-202ENST00000302206 B9D2Q9BPU9 175 aa8.18□□□□□ -1.1
TPM3-202ENST00000302206 KRTAP17-1Q9BYP8 105 aa8.18□□□□□ -1.1
TPM3-202ENST00000302206 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.17□□□□□ -1.1
TPM3-202ENST00000302206 H3BUT2 72 aa8.17□□□□□ -1.1
TPM3-202ENST00000302206 K7ERJ3 54 aa8.17□□□□□ -1.1
TPM3-202ENST00000302206 XCL1P47992 114 aa8.17□□□□□ -1.1
TPM3-202ENST00000302206 UBE2V1Q13404 147 aa8.17□□□□□ -1.1
TPM3-202ENST00000302206 C5orf38Q86SI9 138 aa8.17□□□□□ -1.1
TPM3-202ENST00000302206 MUSTN1Q8IVN3 82 aa8.17□□□□□ -1.1
TPM3-202ENST00000302206 COPS9Q8WXC6 57 aa8.17□□□□□ -1.1
TPM3-202ENST00000302206 CHCHD10Q8WYQ3 142 aaPredicted RBP8.17□□□□□ -1.1
TPM3-202ENST00000302206 TRAV8-4A0A0B4J246 113 aa8.16□□□□□ -1.1
TPM3-202ENST00000302206 A0A0B4J2C4 111 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 262.4 ms