RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 TENM3Q9P273 2699 aa15.35■□□□□ 0.05
SMAD1-201ENST00000302085 SMIM1B2RUZ4 78 aa15.35■□□□□ 0.05
SMAD1-201ENST00000302085 SRSF9Q13242 221 aaKnown RBP eCLIP15.35■□□□□ 0.05
SMAD1-201ENST00000302085 SPANXB1Q9NS25 103 aaPredicted RBP15.35■□□□□ 0.05
SMAD1-201ENST00000302085 NDUFA12Q9UI09 145 aa15.35■□□□□ 0.05
SMAD1-201ENST00000302085 NANOS2P60321 138 aaKnown RBP15.35■□□□□ 0.05
SMAD1-201ENST00000302085 TM2D3Q9BRN9 247 aa15.35■□□□□ 0.05
SMAD1-201ENST00000302085 NBEAL1Q6ZS30 2694 aa15.34■□□□□ 0.05
SMAD1-201ENST00000302085 A0A0J9YXY3 114 aa15.34■□□□□ 0.05
SMAD1-201ENST00000302085 ZFAND6Q6FIF0 208 aa15.34■□□□□ 0.05
SMAD1-201ENST00000302085 SPATA25Q9BR10 227 aa15.34■□□□□ 0.05
SMAD1-201ENST00000302085 LINC00959A0A1B0GUT2 108 aa15.33■□□□□ 0.05
SMAD1-201ENST00000302085 MRAPQ8TCY5 172 aa15.33■□□□□ 0.05
SMAD1-201ENST00000302085 H3BNG1 76 aa15.33■□□□□ 0.04
SMAD1-201ENST00000302085 SMIM13P0DJ93 91 aa15.33■□□□□ 0.04
SMAD1-201ENST00000302085 LELP1Q5T871 98 aa15.33■□□□□ 0.04
SMAD1-201ENST00000302085 C11orf45Q8TAV5 145 aa15.33■□□□□ 0.04
SMAD1-201ENST00000302085 Q8N3U1 123 aa15.32■□□□□ 0.04
SMAD1-201ENST00000302085 NHP2Q9NX24 153 aaKnown RBP15.32■□□□□ 0.04
SMAD1-201ENST00000302085 LYPD5Q6UWN5 251 aa15.31■□□□□ 0.04
SMAD1-201ENST00000302085 K7ERJ3 54 aa15.31■□□□□ 0.04
SMAD1-201ENST00000302085 RAB37Q96AX2 223 aa15.31■□□□□ 0.04
SMAD1-201ENST00000302085 MGAM2Q2M2H8 2515 aa15.3■□□□□ 0.04
SMAD1-201ENST00000302085 IGHV3-30P01768 117 aa15.3■□□□□ 0.04
SMAD1-201ENST00000302085 IGHV3-30-5P0DP03 117 aa15.3■□□□□ 0.04
SMAD1-201ENST00000302085 IGHV3OR16-9A0A0B4J2B5 98 aa15.29■□□□□ 0.04
SMAD1-201ENST00000302085 C9orf118A6NHY6 69 aa15.28■□□□□ 0.04
SMAD1-201ENST00000302085 NDUFA1O15239 70 aa15.28■□□□□ 0.04
SMAD1-201ENST00000302085 LITAFQ99732 161 aa15.28■□□□□ 0.04
SMAD1-201ENST00000302085 CLPSL2Q6UWE3 100 aa15.27■□□□□ 0.04
SMAD1-201ENST00000302085 LINC00269Q8N2A0 174 aa15.27■□□□□ 0.03
SMAD1-201ENST00000302085 DEFB131BA0A096LNP1 70 aa15.26■□□□□ 0.03
SMAD1-201ENST00000302085 A0A1B0GWB2 263 aa15.26■□□□□ 0.03
SMAD1-201ENST00000302085 SS18Q15532 418 aa15.26■□□□□ 0.03
SMAD1-201ENST00000302085 NAA38Q9BRA0 125 aaKnown RBP15.25■□□□□ 0.03
SMAD1-201ENST00000302085 TMEM238C9JI98 176 aa15.25■□□□□ 0.03
SMAD1-201ENST00000302085 ANGP03950 147 aaKnown RBP15.25■□□□□ 0.03
SMAD1-201ENST00000302085 ADAMTSL4-AS1Q5T5F5 129 aa15.25■□□□□ 0.03
SMAD1-201ENST00000302085 A0A087WZ39 114 aa15.24■□□□□ 0.03
SMAD1-201ENST00000302085 CCL25O15444 150 aa15.24■□□□□ 0.03
SMAD1-201ENST00000302085 C5orf38Q86SI9 138 aa15.24■□□□□ 0.03
SMAD1-201ENST00000302085 Q9H8V8 135 aa15.24■□□□□ 0.03
SMAD1-201ENST00000302085 H3BUT2 72 aa15.23■□□□□ 0.03
SMAD1-201ENST00000302085 XCL1P47992 114 aa15.23■□□□□ 0.03
SMAD1-201ENST00000302085 VAMP3Q15836 100 aa15.23■□□□□ 0.03
SMAD1-201ENST00000302085 MUSTN1Q8IVN3 82 aa15.22■□□□□ 0.03
SMAD1-201ENST00000302085 ZNF625Q96I27 306 aaPredicted RBP15.22■□□□□ 0.03
SMAD1-201ENST00000302085 REG3AQ06141 175 aa15.22■□□□□ 0.03
SMAD1-201ENST00000302085 TMEM238LA0A1B0GVL6 79 aa15.21■□□□□ 0.03
SMAD1-201ENST00000302085 A6NJY4 79 aa15.21■□□□□ 0.03
SMAD1-201ENST00000302085 COX7B2Q8TF08 81 aa15.21■□□□□ 0.03
SMAD1-201ENST00000302085 TIMM17BO60830 172 aa15.2■□□□□ 0.02
SMAD1-201ENST00000302085 SPANXDQ9BXN6 97 aa15.2■□□□□ 0.02
SMAD1-201ENST00000302085 SPANXCQ9NY87 97 aa15.2■□□□□ 0.02
SMAD1-201ENST00000302085 ESRGQ1W209 222 aa15.18■□□□□ 0.02
SMAD1-201ENST00000302085 IGLL5B9A064 214 aa15.18■□□□□ 0.02
SMAD1-201ENST00000302085 UBE2V1Q13404 147 aa15.18■□□□□ 0.02
SMAD1-201ENST00000302085 A4D1N5 150 aa15.17■□□□□ 0.02
SMAD1-201ENST00000302085 PRSS2P07478 247 aa15.17■□□□□ 0.02
SMAD1-201ENST00000302085 CHCHD10Q8WYQ3 142 aaPredicted RBP15.17■□□□□ 0.02
SMAD1-201ENST00000302085 TOMM7Q9P0U1 55 aa15.17■□□□□ 0.02
SMAD1-201ENST00000302085 CFC1BP0CG36 223 aa15.16■□□□□ 0.02
SMAD1-201ENST00000302085 CFC1P0CG37 223 aa15.16■□□□□ 0.02
SMAD1-201ENST00000302085 MIAQ16674 131 aa15.16■□□□□ 0.02
SMAD1-201ENST00000302085 IGLV10-54A0A075B6I4 117 aa15.16■□□□□ 0.02
SMAD1-201ENST00000302085 TRAV10A0A0B4J240 114 aa15.16■□□□□ 0.02
SMAD1-201ENST00000302085 APOMO95445 188 aa15.16■□□□□ 0.02
SMAD1-201ENST00000302085 CD164L2Q6UWJ8 174 aa15.16■□□□□ 0.02
SMAD1-201ENST00000302085 WFDC10BQ8IUB3 73 aa15.16■□□□□ 0.02
SMAD1-201ENST00000302085 KLK12Q9UKR0 248 aa15.16■□□□□ 0.02
SMAD1-201ENST00000302085 A0A1W2PPM0 123 aa15.15■□□□□ 0.02
SMAD1-201ENST00000302085 IGHV3-33P01772 117 aa15.15■□□□□ 0.02
SMAD1-201ENST00000302085 RPL24P83731 157 aaKnown RBP15.15■□□□□ 0.02
SMAD1-201ENST00000302085 PRR34Q9NV39 138 aa15.15■□□□□ 0.02
SMAD1-201ENST00000302085 HERV-K104P63124 156 aa15.15■□□□□ 0.02
SMAD1-201ENST00000302085 EIF4EBP3O60516 100 aaPredicted RBP15.14■□□□□ 0.01
SMAD1-201ENST00000302085 CIRBPQ14011 172 aaKnown RBP15.14■□□□□ 0.01
SMAD1-201ENST00000302085 LINC01561Q8N1V8 128 aa15.14■□□□□ 0.01
SMAD1-201ENST00000302085 DAND5Q8N907 189 aa15.14■□□□□ 0.01
SMAD1-201ENST00000302085 ENHOQ6UWT2 76 aa15.13■□□□□ 0.01
SMAD1-201ENST00000302085 NPC2P61916 151 aa15.12■□□□□ 0.01
SMAD1-201ENST00000302085 A0A0U1RRA0 63 aa15.11■□□□□ 0.01
SMAD1-201ENST00000302085 COX7A2LO14548 114 aa15.11■□□□□ 0.01
SMAD1-201ENST00000302085 FOXI1Q12951 378 aa15.11■□□□□ 0.01
SMAD1-201ENST00000302085 MEIG1Q5JSS6 88 aa15.1■□□□□ 0.01
SMAD1-201ENST00000302085 PGPEP1Q9NXJ5 209 aa15.1■□□□□ 0.01
SMAD1-201ENST00000302085 FABP2P12104 132 aa15.09■□□□□ 0.01
SMAD1-201ENST00000302085 IFITM1P13164 125 aa15.09■□□□□ 0.01
SMAD1-201ENST00000302085 HUWE1Q7Z6Z7 4374 aaKnown RBP15.08■□□□□ 0.01
SMAD1-201ENST00000302085 GAGE10A6NGK3 116 aa15.08■□□□□ 0
SMAD1-201ENST00000302085 C6orf226Q5I0X4 101 aa15.08■□□□□ 0
SMAD1-201ENST00000302085 GAGE12HA6NDE8 117 aa15.07■□□□□ 0
SMAD1-201ENST00000302085 TSPAN13O95857 204 aa15.07■□□□□ 0
SMAD1-201ENST00000302085 LINC00308Q8TCZ7 52 aa15.07■□□□□ 0
SMAD1-201ENST00000302085 PRO1854Q9UHT4 67 aa15.07■□□□□ 0
SMAD1-201ENST00000302085 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.07■□□□□ 0
SMAD1-201ENST00000302085 K7EP34 96 aa15.07■□□□□ 0
SMAD1-201ENST00000302085 Q8IZM0 81 aa15.07■□□□□ 0
SMAD1-201ENST00000302085 B9D2Q9BPU9 175 aa15.07■□□□□ 0
SMAD1-201ENST00000302085 A0A0B4J2C4 111 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 201.3 ms