RNA–Protein interactions for RNA: ENST00000295400.10

TGFA-201, Transcript of transforming growth factor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFA, Length 4,310 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-201ENST00000295400 FAM222AQ5U5X8 452 aa8.43□□□□□ -1.06
TGFA-201ENST00000295400 ZNF843Q8N446 348 aa8.43□□□□□ -1.06
TGFA-201ENST00000295400 SMR3AQ99954 134 aa8.43□□□□□ -1.06
TGFA-201ENST00000295400 KIF25-AS1Q9Y6Z4 181 aa8.43□□□□□ -1.06
TGFA-201ENST00000295400 IGKV2D-24A0A075B6R9 120 aa8.43□□□□□ -1.06
TGFA-201ENST00000295400 COX6A2Q02221 97 aa8.43□□□□□ -1.06
TGFA-201ENST00000295400 DEFB105AQ8NG35 78 aa8.43□□□□□ -1.06
TGFA-201ENST00000295400 ORMDL1Q9P0S3 153 aa8.43□□□□□ -1.06
TGFA-201ENST00000295400 LINC01006Q8NI28 216 aa8.42□□□□□ -1.06
TGFA-201ENST00000295400 FLNAP21333 2647 aaKnown RBP8.42□□□□□ -1.06
TGFA-201ENST00000295400 RPL32P62910 135 aaKnown RBP8.42□□□□□ -1.06
TGFA-201ENST00000295400 PYGO1Q9Y3Y4 419 aa8.42□□□□□ -1.06
TGFA-201ENST00000295400 MAST4O15021 2626 aa8.42□□□□□ -1.06
TGFA-201ENST00000295400 RBMY1FQ15415 496 aaKnown RBP8.42□□□□□ -1.06
TGFA-201ENST00000295400 UBL5Q9BZL1 73 aa8.42□□□□□ -1.06
TGFA-201ENST00000295400 COL27A1Q8IZC6 1860 aaPredicted RBP8.42□□□□□ -1.06
TGFA-201ENST00000295400 CHD6Q8TD26 2715 aa8.42□□□□□ -1.06
TGFA-201ENST00000295400 LINC00315P59091 139 aa8.41□□□□□ -1.06
TGFA-201ENST00000295400 MRPS36P82909 103 aaKnown RBP8.4□□□□□ -1.06
TGFA-201ENST00000295400 PRO0255Q9UI72 69 aa8.4□□□□□ -1.06
TGFA-201ENST00000295400 LINC00242Q5T6M2 205 aa8.4□□□□□ -1.06
TGFA-201ENST00000295400 TRBV30A0A0K0K1B3 111 aa8.4□□□□□ -1.06
TGFA-201ENST00000295400 BBC3Q96PG8 261 aaPredicted RBP8.4□□□□□ -1.06
TGFA-201ENST00000295400 NDUFA1O15239 70 aa8.4□□□□□ -1.07
TGFA-201ENST00000295400 RELNP78509 3460 aa8.4□□□□□ -1.07
TGFA-201ENST00000295400 F8P00451 2351 aa8.39□□□□□ -1.07
TGFA-201ENST00000295400 MGAM2Q2M2H8 2515 aa8.39□□□□□ -1.07
TGFA-201ENST00000295400 SPAG11BQ08648 103 aa8.39□□□□□ -1.07
TGFA-201ENST00000295400 CHCHD7Q9BUK0 85 aa8.39□□□□□ -1.07
TGFA-201ENST00000295400 TRBV6-8A0A0A6YYG3 113 aa8.39□□□□□ -1.07
TGFA-201ENST00000295400 ITPR3Q14573 2671 aa8.39□□□□□ -1.07
TGFA-201ENST00000295400 H0YGX0 51 aa8.38□□□□□ -1.07
TGFA-201ENST00000295400 SPART-AS1P0CW21 52 aa8.38□□□□□ -1.07
TGFA-201ENST00000295400 NDUFV3P56181 108 aaKnown RBP8.38□□□□□ -1.07
TGFA-201ENST00000295400 HIGD2BQ4VC39 106 aa8.38□□□□□ -1.07
TGFA-201ENST00000295400 C1orf158Q8N1D5 194 aa8.38□□□□□ -1.07
TGFA-201ENST00000295400 H7C423 109 aa8.38□□□□□ -1.07
TGFA-201ENST00000295400 TIRAPP58753 221 aa8.38□□□□□ -1.07
TGFA-201ENST00000295400 RPL18AQ02543 176 aaKnown RBP8.38□□□□□ -1.07
TGFA-201ENST00000295400 MRPL23Q16540 153 aaKnown RBP8.38□□□□□ -1.07
TGFA-201ENST00000295400 CAMK2N2Q96S95 79 aa8.38□□□□□ -1.07
TGFA-201ENST00000295400 SPANXCQ9NY87 97 aa8.38□□□□□ -1.07
TGFA-201ENST00000295400 DSCR8Q96T75 97 aa8.38□□□□□ -1.07
TGFA-201ENST00000295400 ASH1LQ9NR48 2969 aaKnown RBP8.38□□□□□ -1.07
TGFA-201ENST00000295400 A0A1B0GX51 115 aa8.38□□□□□ -1.07
TGFA-201ENST00000295400 SDIM1Q6ZPB5 146 aa8.38□□□□□ -1.07
TGFA-201ENST00000295400 SPATA25Q9BR10 227 aa8.38□□□□□ -1.07
TGFA-201ENST00000295400 XAGE1AQ9HD64 81 aa8.38□□□□□ -1.07
TGFA-201ENST00000295400 INAFM1C9JVW0 142 aa8.37□□□□□ -1.07
TGFA-201ENST00000295400 UBE2D3P61077 147 aa8.37□□□□□ -1.07
TGFA-201ENST00000295400 UBE2D2P62837 147 aa8.37□□□□□ -1.07
TGFA-201ENST00000295400 C9orf66Q5T8R8 295 aa8.37□□□□□ -1.07
TGFA-201ENST00000295400 NKAPP1Q8N9T2 125 aa8.37□□□□□ -1.07
TGFA-201ENST00000295400 TMEM126AQ9H061 195 aa8.36□□□□□ -1.07
TGFA-201ENST00000295400 TEP1Q99973 2627 aaKnown RBP8.36□□□□□ -1.07
TGFA-201ENST00000295400 IGHV4-28A0A0C4DH34 117 aa8.36□□□□□ -1.07
TGFA-201ENST00000295400 FAM110AQ9BQ89 295 aa8.36□□□□□ -1.07
TGFA-201ENST00000295400 PSCAO43653 123 aa8.35□□□□□ -1.07
TGFA-201ENST00000295400 CDC42SE2Q9NRR3 84 aa8.35□□□□□ -1.07
TGFA-201ENST00000295400 IGLV4-60A0A075B6I1 120 aa8.35□□□□□ -1.07
TGFA-201ENST00000295400 GHRHP01286 108 aa8.35□□□□□ -1.07
TGFA-201ENST00000295400 REG3AQ06141 175 aa8.35□□□□□ -1.07
TGFA-201ENST00000295400 CHCHD10Q8WYQ3 142 aaPredicted RBP8.35□□□□□ -1.07
TGFA-201ENST00000295400 LST1O00453 97 aa8.35□□□□□ -1.07
TGFA-201ENST00000295400 ACYP1P07311 99 aa8.35□□□□□ -1.07
TGFA-201ENST00000295400 PRR3P79522 188 aaKnown RBP8.35□□□□□ -1.07
TGFA-201ENST00000295400 SMIM1B2RUZ4 78 aa8.34□□□□□ -1.07
TGFA-201ENST00000295400 SMCPP49901 116 aaPredicted RBP8.34□□□□□ -1.07
TGFA-201ENST00000295400 UBE2DNLQ8IWF7 75 aa8.34□□□□□ -1.07
TGFA-201ENST00000295400 C1orf43Q9BWL3 253 aa8.34□□□□□ -1.07
TGFA-201ENST00000295400 SPANXDQ9BXN6 97 aa8.34□□□□□ -1.07
TGFA-201ENST00000295400 TRBV6-4A0A1B0GX49 114 aa8.33□□□□□ -1.08
TGFA-201ENST00000295400 CLUHP3Q96NS8 147 aa8.33□□□□□ -1.08
TGFA-201ENST00000295400 AMELXQ99217 191 aa8.33□□□□□ -1.08
TGFA-201ENST00000295400 C9orf116Q5BN46 136 aaPredicted RBP8.32□□□□□ -1.08
TGFA-201ENST00000295400 FLNCQ14315 2725 aa8.32□□□□□ -1.08
TGFA-201ENST00000295400 CCDC179H3BU77 68 aa8.32□□□□□ -1.08
TGFA-201ENST00000295400 SMIM11BQ8TCY0 68 aa8.32□□□□□ -1.08
TGFA-201ENST00000295400 LINC01546A6NGU7 62 aa8.31□□□□□ -1.08
TGFA-201ENST00000295400 TRACP01848 142 aa8.31□□□□□ -1.08
TGFA-201ENST00000295400 CCL18P55774 89 aa8.31□□□□□ -1.08
TGFA-201ENST00000295400 C6orf99Q4VX62 202 aa8.31□□□□□ -1.08
TGFA-201ENST00000295400 FAM19A4Q96LR4 140 aa8.31□□□□□ -1.08
TGFA-201ENST00000295400 TRAV23DV6A0A075B6W5 121 aa8.31□□□□□ -1.08
TGFA-201ENST00000295400 LINC00959A0A1B0GUT2 108 aa8.31□□□□□ -1.08
TGFA-201ENST00000295400 LINC00643Q86TS7 51 aa8.31□□□□□ -1.08
TGFA-201ENST00000295400 LRRC75A-AS1Q8N1F1 130 aa8.31□□□□□ -1.08
TGFA-201ENST00000295400 SCXQ7RTU7 201 aa8.29□□□□□ -1.08
TGFA-201ENST00000295400 IBA57-AS1B1ANH7 110 aa8.29□□□□□ -1.08
TGFA-201ENST00000295400 CDIP1Q9H305 208 aa8.29□□□□□ -1.08
TGFA-201ENST00000295400 SMG1Q96Q15 3661 aaKnown RBP8.29□□□□□ -1.08
TGFA-201ENST00000295400 BRI3O95415 125 aa8.28□□□□□ -1.08
TGFA-201ENST00000295400 PRO0461Q9UI25 63 aa8.28□□□□□ -1.08
TGFA-201ENST00000295400 ITPR1Q14643 2758 aa8.28□□□□□ -1.08
TGFA-201ENST00000295400 TIMM17BO60830 172 aa8.27□□□□□ -1.08
TGFA-201ENST00000295400 RBM3P98179 157 aaKnown RBP8.27□□□□□ -1.08
TGFA-201ENST00000295400 HELZ2Q9BYK8 2649 aaKnown RBP8.27□□□□□ -1.09
TGFA-201ENST00000295400 WFDC9Q8NEX5 89 aa8.27□□□□□ -1.09
TGFA-201ENST00000295400 PRB2P02812 416 aaPredicted RBP8.27□□□□□ -1.09
TGFA-201ENST00000295400 Q8N2B8 174 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms