RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 TIRAPP58753 221 aa8.85□□□□□ -0.99
SYNGAP1-201ENST00000293748 C9orf66Q5T8R8 295 aa8.85□□□□□ -0.99
SYNGAP1-201ENST00000293748 BPY2O14599 106 aa8.85□□□□□ -0.99
SYNGAP1-201ENST00000293748 SDIM1Q6ZPB5 146 aa8.85□□□□□ -0.99
SYNGAP1-201ENST00000293748 CDKN2A-AS1Q9UH64 79 aa8.85□□□□□ -0.99
SYNGAP1-201ENST00000293748 CCDC140Q96MF4 163 aa8.85□□□□□ -0.99
SYNGAP1-201ENST00000293748 CR1P17927 2039 aa8.84□□□□□ -0.99
SYNGAP1-201ENST00000293748 IGLV4-3A0A075B6K6 122 aa8.84□□□□□ -0.99
SYNGAP1-201ENST00000293748 PRB2P02812 416 aaPredicted RBP8.84□□□□□ -0.99
SYNGAP1-201ENST00000293748 CFAP126Q5VTH2 177 aa8.84□□□□□ -0.99
SYNGAP1-201ENST00000293748 LINC00308Q8TCZ7 52 aa8.84□□□□□ -0.99
SYNGAP1-201ENST00000293748 IGHV3-30P01768 117 aa8.83□□□□□ -1
SYNGAP1-201ENST00000293748 IGHV3-30-5P0DP03 117 aa8.83□□□□□ -1
SYNGAP1-201ENST00000293748 CRIP1P50238 77 aa8.83□□□□□ -1
SYNGAP1-201ENST00000293748 RNF185Q96GF1 192 aa8.83□□□□□ -1
SYNGAP1-201ENST00000293748 PRO0255Q9UI72 69 aa8.83□□□□□ -1
SYNGAP1-201ENST00000293748 ARHGAP32A7KAX9 2087 aa8.83□□□□□ -1
SYNGAP1-201ENST00000293748 ITPR2Q14571 2701 aa8.83□□□□□ -1
SYNGAP1-201ENST00000293748 MTORP42345 2549 aa8.83□□□□□ -1
SYNGAP1-201ENST00000293748 LY6LH3BQJ8 138 aa8.83□□□□□ -1
SYNGAP1-201ENST00000293748 UFSP1Q6NVU6 142 aa8.83□□□□□ -1
SYNGAP1-201ENST00000293748 FAM110AQ9BQ89 295 aa8.83□□□□□ -1
SYNGAP1-201ENST00000293748 APCP25054 2843 aa8.82□□□□□ -1
SYNGAP1-201ENST00000293748 Q6ZSV7 163 aa8.82□□□□□ -1
SYNGAP1-201ENST00000293748 JMJD1CQ15652 2540 aa8.82□□□□□ -1
SYNGAP1-201ENST00000293748 MRPS12O15235 138 aaKnown RBP8.82□□□□□ -1
SYNGAP1-201ENST00000293748 KRTAP24-1Q3LI83 254 aa8.82□□□□□ -1
SYNGAP1-201ENST00000293748 IBA57-AS1B1ANH7 110 aa8.82□□□□□ -1
SYNGAP1-201ENST00000293748 TIMM17BO60830 172 aa8.82□□□□□ -1
SYNGAP1-201ENST00000293748 ZFAND2AQ8N6M9 145 aa8.82□□□□□ -1
SYNGAP1-201ENST00000293748 SETXQ7Z333 2677 aaKnown RBP8.82□□□□□ -1
SYNGAP1-201ENST00000293748 SERP2Q8N6R1 65 aa8.81□□□□□ -1
SYNGAP1-201ENST00000293748 CCL18P55774 89 aa8.81□□□□□ -1
SYNGAP1-201ENST00000293748 C16orf95Q9H693 158 aa8.81□□□□□ -1
SYNGAP1-201ENST00000293748 FAM240AA0A1B0GVK7 77 aa8.81□□□□□ -1
SYNGAP1-201ENST00000293748 SPATA3Q8NHX4 192 aa8.81□□□□□ -1
SYNGAP1-201ENST00000293748 KLK12Q9UKR0 248 aa8.81□□□□□ -1
SYNGAP1-201ENST00000293748 TRBV6-5A0A0K0K1A5 114 aa8.81□□□□□ -1
SYNGAP1-201ENST00000293748 TRBV27A0A0K0K1C4 114 aa8.81□□□□□ -1
SYNGAP1-201ENST00000293748 EBI3Q14213 229 aa8.81□□□□□ -1
SYNGAP1-201ENST00000293748 ESM1Q9NQ30 184 aa8.81□□□□□ -1
SYNGAP1-201ENST00000293748 NDUFC2-KCTD14E9PQ53 114 aa8.8□□□□□ -1
SYNGAP1-201ENST00000293748 KRTAP21-3Q3LHN1 58 aa8.8□□□□□ -1
SYNGAP1-201ENST00000293748 FAM222AQ5U5X8 452 aa8.8□□□□□ -1
SYNGAP1-201ENST00000293748 PYGO1Q9Y3Y4 419 aa8.8□□□□□ -1
SYNGAP1-201ENST00000293748 H7C423 109 aa8.8□□□□□ -1
SYNGAP1-201ENST00000293748 CLUHP3Q96NS8 147 aa8.8□□□□□ -1
SYNGAP1-201ENST00000293748 NDUFC1O43677 76 aa8.8□□□□□ -1
SYNGAP1-201ENST00000293748 ATP5EP56381 51 aaPredicted RBP8.8□□□□□ -1
SYNGAP1-201ENST00000293748 LINC00467Q9BRT7 94 aa8.8□□□□□ -1
SYNGAP1-201ENST00000293748 K7EQG2 157 aa8.8□□□□□ -1
SYNGAP1-201ENST00000293748 IGLV2-11P01706 119 aa8.8□□□□□ -1
SYNGAP1-201ENST00000293748 LINC01006Q8NI28 216 aa8.8□□□□□ -1
SYNGAP1-201ENST00000293748 ABCA2Q9BZC7 2435 aa8.79□□□□□ -1
SYNGAP1-201ENST00000293748 M0QY20 66 aa8.79□□□□□ -1
SYNGAP1-201ENST00000293748 LST1O00453 97 aa8.79□□□□□ -1
SYNGAP1-201ENST00000293748 XGP55808 180 aa8.79□□□□□ -1
SYNGAP1-201ENST00000293748 SVIPQ8NHG7 77 aa8.79□□□□□ -1
SYNGAP1-201ENST00000293748 C4orf3Q8WVX3 66 aa8.79□□□□□ -1
SYNGAP1-201ENST00000293748 ZMAT4Q9H898 229 aa8.79□□□□□ -1
SYNGAP1-201ENST00000293748 MAP6D1Q9H9H5 199 aa8.79□□□□□ -1
SYNGAP1-201ENST00000293748 BSNQ9UPA5 3926 aa8.79□□□□□ -1
SYNGAP1-201ENST00000293748 IGF1P05019 195 aa8.78□□□□□ -1
SYNGAP1-201ENST00000293748 ENHOQ6UWT2 76 aa8.78□□□□□ -1
SYNGAP1-201ENST00000293748 SMG1Q96Q15 3661 aaKnown RBP8.78□□□□□ -1
SYNGAP1-201ENST00000293748 USP17L23D6RBM5 183 aa8.78□□□□□ -1
SYNGAP1-201ENST00000293748 ZFAND3Q9H8U3 227 aa8.78□□□□□ -1
SYNGAP1-201ENST00000293748 FN1P02751 2386 aaKnown RBP8.78□□□□□ -1
SYNGAP1-201ENST00000293748 COX7CP15954 63 aa8.78□□□□□ -1
SYNGAP1-201ENST00000293748 Q6Q795 121 aa8.78□□□□□ -1
SYNGAP1-201ENST00000293748 NRACQ8N912 160 aa8.77□□□□□ -1.01
SYNGAP1-201ENST00000293748 LINC00310P59036 64 aa8.77□□□□□ -1.01
SYNGAP1-201ENST00000293748 UBE2AP49459 152 aa8.77□□□□□ -1.01
SYNGAP1-201ENST00000293748 MRPL55Q7Z7F7 128 aaKnown RBP8.76□□□□□ -1.01
SYNGAP1-201ENST00000293748 ZNF702PQ9H963 129 aa8.76□□□□□ -1.01
SYNGAP1-201ENST00000293748 Q6ZTI0 123 aa8.76□□□□□ -1.01
SYNGAP1-201ENST00000293748 PIK3CD-AS1Q5SR53 167 aa8.75□□□□□ -1.01
SYNGAP1-201ENST00000293748 Q8N976 141 aa8.75□□□□□ -1.01
SYNGAP1-201ENST00000293748 MPLKIPQ8TAP9 179 aa8.75□□□□□ -1.01
SYNGAP1-201ENST00000293748 C20orf173Q96LM9 149 aa8.75□□□□□ -1.01
SYNGAP1-201ENST00000293748 SMAD5-AS1Q9Y6J3 95 aa8.75□□□□□ -1.01
SYNGAP1-201ENST00000293748 CCDC179H3BU77 68 aa8.74□□□□□ -1.01
SYNGAP1-201ENST00000293748 V9GYY9 64 aa8.74□□□□□ -1.01
SYNGAP1-201ENST00000293748 LINC01548A6NM66 108 aa8.74□□□□□ -1.01
SYNGAP1-201ENST00000293748 Q8N6K4 173 aa8.74□□□□□ -1.01
SYNGAP1-201ENST00000293748 SPTSSBQ8NFR3 76 aa8.74□□□□□ -1.01
SYNGAP1-201ENST00000293748 SLPIP03973 132 aa8.74□□□□□ -1.01
SYNGAP1-201ENST00000293748 DEFB135Q30KP9 77 aa8.74□□□□□ -1.01
SYNGAP1-201ENST00000293748 CNFNQ9BYD5 112 aa8.74□□□□□ -1.01
SYNGAP1-201ENST00000293748 H0Y9J4 135 aa8.73□□□□□ -1.01
SYNGAP1-201ENST00000293748 INSL3P51460 131 aa8.73□□□□□ -1.01
SYNGAP1-201ENST00000293748 UTP20O75691 2785 aaKnown RBP8.73□□□□□ -1.01
SYNGAP1-201ENST00000293748 POLR2KP53803 58 aaKnown RBP8.73□□□□□ -1.01
SYNGAP1-201ENST00000293748 REG3AQ06141 175 aa8.73□□□□□ -1.01
SYNGAP1-201ENST00000293748 LINC00269Q8N2A0 174 aa8.73□□□□□ -1.01
SYNGAP1-201ENST00000293748 Q8N2B8 174 aa8.72□□□□□ -1.01
SYNGAP1-201ENST00000293748 CHCHD10Q8WYQ3 142 aaPredicted RBP8.72□□□□□ -1.01
SYNGAP1-201ENST00000293748 C6orf99Q4VX62 202 aa8.72□□□□□ -1.01
SYNGAP1-201ENST00000293748 PROK1P58294 105 aa8.71□□□□□ -1.01
SYNGAP1-201ENST00000293748 ADGRG4Q8IZF6 3080 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms