RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 FAM223AQ8IWN6 122 aa9.29□□□□□ -0.92
HERC6-202ENST00000273960 UBE2D4Q9Y2X8 147 aa9.29□□□□□ -0.92
HERC6-202ENST00000273960 PFN2P35080 140 aa9.29□□□□□ -0.92
HERC6-202ENST00000273960 RPL18AQ02543 176 aaKnown RBP9.29□□□□□ -0.92
HERC6-202ENST00000273960 FAM223BA6NKX1 122 aa9.28□□□□□ -0.92
HERC6-202ENST00000273960 USP17L23D6RBM5 183 aa9.28□□□□□ -0.92
HERC6-202ENST00000273960 LECT2O14960 151 aa9.28□□□□□ -0.92
HERC6-202ENST00000273960 SNRPD3P62318 126 aaKnown RBP9.28□□□□□ -0.92
HERC6-202ENST00000273960 B4DSR2 109 aa9.28□□□□□ -0.92
HERC6-202ENST00000273960 RBMY1A1P0DJD3 496 aaKnown RBP9.27□□□□□ -0.93
HERC6-202ENST00000273960 RBMY1CP0DJD4 496 aa9.27□□□□□ -0.93
HERC6-202ENST00000273960 INAFM2P0DMQ5 153 aa9.27□□□□□ -0.93
HERC6-202ENST00000273960 RBMY1FQ15415 496 aaKnown RBP9.27□□□□□ -0.93
HERC6-202ENST00000273960 C5orf38Q86SI9 138 aa9.27□□□□□ -0.93
HERC6-202ENST00000273960 CHCHD7Q9BUK0 85 aa9.27□□□□□ -0.93
HERC6-202ENST00000273960 C22orf24Q9Y442 160 aa9.27□□□□□ -0.93
HERC6-202ENST00000273960 CRPP02741 224 aa9.27□□□□□ -0.93
HERC6-202ENST00000273960 LINC00158P58513 81 aa9.27□□□□□ -0.93
HERC6-202ENST00000273960 KRTAP10-9P60411 292 aa9.27□□□□□ -0.93
HERC6-202ENST00000273960 ITPR3Q14573 2671 aa9.27□□□□□ -0.93
HERC6-202ENST00000273960 TRAV25A0A0B4J276 109 aa9.26□□□□□ -0.93
HERC6-202ENST00000273960 CRYGAP11844 174 aa9.26□□□□□ -0.93
HERC6-202ENST00000273960 DEFB112Q30KQ8 113 aa9.26□□□□□ -0.93
HERC6-202ENST00000273960 C20orf197Q8N268 126 aa9.26□□□□□ -0.93
HERC6-202ENST00000273960 NDUFA1O15239 70 aa9.26□□□□□ -0.93
HERC6-202ENST00000273960 MIR7-3HGQ8N6C7 128 aa9.25□□□□□ -0.93
HERC6-202ENST00000273960 NF1P21359 2839 aa9.25□□□□□ -0.93
HERC6-202ENST00000273960 RPL36AP83881 106 aaKnown RBP9.25□□□□□ -0.93
HERC6-202ENST00000273960 RPL36ALQ969Q0 106 aaKnown RBP9.25□□□□□ -0.93
HERC6-202ENST00000273960 APRG1Q8IVJ8 170 aa9.24□□□□□ -0.93
HERC6-202ENST00000273960 LINC01561Q8N1V8 128 aa9.24□□□□□ -0.93
HERC6-202ENST00000273960 SERP2Q8N6R1 65 aa9.24□□□□□ -0.93
HERC6-202ENST00000273960 PKIGQ9Y2B9 76 aa9.24□□□□□ -0.93
HERC6-202ENST00000273960 DEFB131AP59861 70 aa9.24□□□□□ -0.93
HERC6-202ENST00000273960 FAM19A1Q7Z5A9 133 aa9.24□□□□□ -0.93
HERC6-202ENST00000273960 CXCL5P42830 114 aa9.24□□□□□ -0.93
HERC6-202ENST00000273960 FHL2Q14192 279 aa9.24□□□□□ -0.93
HERC6-202ENST00000273960 LINC00242Q5T6M2 205 aa9.24□□□□□ -0.93
HERC6-202ENST00000273960 LINC00337Q8N6G1 96 aa9.24□□□□□ -0.93
HERC6-202ENST00000273960 LINC01600Q96MT4 127 aa9.24□□□□□ -0.93
HERC6-202ENST00000273960 PAX4O43316 350 aa9.23□□□□□ -0.93
HERC6-202ENST00000273960 C19orf54Q5BKX5 351 aa9.23□□□□□ -0.93
HERC6-202ENST00000273960 GHRHP01286 108 aa9.23□□□□□ -0.93
HERC6-202ENST00000273960 SND1-IT1Q9HBX3 110 aa9.23□□□□□ -0.93
HERC6-202ENST00000273960 PYGO1Q9Y3Y4 419 aa9.23□□□□□ -0.93
HERC6-202ENST00000273960 C1orf43Q9BWL3 253 aa9.22□□□□□ -0.93
HERC6-202ENST00000273960 A0A1W2PRX2 142 aa9.22□□□□□ -0.93
HERC6-202ENST00000273960 BEAN1Q3B7T3 259 aa9.22□□□□□ -0.93
HERC6-202ENST00000273960 SMIM11BQ8TCY0 68 aa9.22□□□□□ -0.93
HERC6-202ENST00000273960 UBE2E2Q96LR5 201 aa9.22□□□□□ -0.93
HERC6-202ENST00000273960 FBN2P35556 2912 aa9.22□□□□□ -0.93
HERC6-202ENST00000273960 DEFB136Q30KP8 78 aa9.22□□□□□ -0.93
HERC6-202ENST00000273960 NBEAL2Q6ZNJ1 2754 aa9.22□□□□□ -0.93
HERC6-202ENST00000273960 ENHOQ6UWT2 76 aa9.21□□□□□ -0.93
HERC6-202ENST00000273960 TMEM243Q9BU79 118 aa9.21□□□□□ -0.94
HERC6-202ENST00000273960 NIPBLQ6KC79 2804 aaeCLIP9.21□□□□□ -0.94
HERC6-202ENST00000273960 SMIM1B2RUZ4 78 aa9.21□□□□□ -0.94
HERC6-202ENST00000273960 WFDC11Q8NEX6 87 aa9.21□□□□□ -0.94
HERC6-202ENST00000273960 Q96MF0 132 aa9.21□□□□□ -0.94
HERC6-202ENST00000273960 TMEM258P61165 79 aa9.2□□□□□ -0.94
HERC6-202ENST00000273960 ITPR2Q14571 2701 aa9.2□□□□□ -0.94
HERC6-202ENST00000273960 RPL28P46779 137 aaKnown RBP9.19□□□□□ -0.94
HERC6-202ENST00000273960 LINC01356Q8N9X3 169 aa9.19□□□□□ -0.94
HERC6-202ENST00000273960 XCL2Q9UBD3 114 aa9.19□□□□□ -0.94
HERC6-202ENST00000273960 USMG5Q96IX5 58 aa9.19□□□□□ -0.94
HERC6-202ENST00000273960 SNURFQ9Y675 71 aa9.19□□□□□ -0.94
HERC6-202ENST00000273960 MXRA5Q9NR99 2828 aa9.19□□□□□ -0.94
HERC6-202ENST00000273960 TRGV1A0A0A0MS02 117 aa9.18□□□□□ -0.94
HERC6-202ENST00000273960 ZNF843Q8N446 348 aa9.18□□□□□ -0.94
HERC6-202ENST00000273960 PRR3P79522 188 aaKnown RBP9.18□□□□□ -0.94
HERC6-202ENST00000273960 TIMM17BO60830 172 aa9.17□□□□□ -0.94
HERC6-202ENST00000273960 Q5XG85 94 aa9.17□□□□□ -0.94
HERC6-202ENST00000273960 A0A0U1RQV1 116 aa9.17□□□□□ -0.94
HERC6-202ENST00000273960 IGKV2-28A0A075B6P5 120 aa9.16□□□□□ -0.94
HERC6-202ENST00000273960 RBMY1BA6NDE4 496 aaKnown RBP9.16□□□□□ -0.94
HERC6-202ENST00000273960 RBMY1EA6NEQ0 496 aaKnown RBP9.16□□□□□ -0.94
HERC6-202ENST00000273960 IGKV2D-28P01615 120 aa9.16□□□□□ -0.94
HERC6-202ENST00000273960 RBMY1DP0C7P1 496 aaKnown RBP9.16□□□□□ -0.94
HERC6-202ENST00000273960 K7EQG2 157 aa9.15□□□□□ -0.94
HERC6-202ENST00000273960 RPS28P62857 69 aaKnown RBP9.15□□□□□ -0.94
HERC6-202ENST00000273960 UPK3BQ9BT76 320 aa9.15□□□□□ -0.94
HERC6-202ENST00000273960 TRAV13-2A0A0B4J235 113 aa9.15□□□□□ -0.95
HERC6-202ENST00000273960 A6NDX4 124 aa9.14□□□□□ -0.95
HERC6-202ENST00000273960 UBE2L6O14933 153 aa9.14□□□□□ -0.95
HERC6-202ENST00000273960 Q6ZTI0 123 aa9.14□□□□□ -0.95
HERC6-202ENST00000273960 LINC00336Q6ZUF6 198 aa9.14□□□□□ -0.95
HERC6-202ENST00000273960 HAMPP81172 84 aa9.13□□□□□ -0.95
HERC6-202ENST00000273960 APCP25054 2843 aa9.13□□□□□ -0.95
HERC6-202ENST00000273960 CCL18P55774 89 aa9.13□□□□□ -0.95
HERC6-202ENST00000273960 Q6JHZ5 121 aa9.13□□□□□ -0.95
HERC6-202ENST00000273960 CLPSL2Q6UWE3 100 aa9.13□□□□□ -0.95
HERC6-202ENST00000273960 C18orf65Q6ZTR6 163 aa9.13□□□□□ -0.95
HERC6-202ENST00000273960 ZNF415Q09FC8 603 aa9.12□□□□□ -0.95
HERC6-202ENST00000273960 COPS9Q8WXC6 57 aa9.12□□□□□ -0.95
HERC6-202ENST00000273960 IGLV5-39A0A0G2JS06 123 aa9.12□□□□□ -0.95
HERC6-202ENST00000273960 LOC100131303A0A0U1RQF7 123 aa9.12□□□□□ -0.95
HERC6-202ENST00000273960 RPL35AP18077 110 aaKnown RBP9.12□□□□□ -0.95
HERC6-202ENST00000273960 SLURP1P55000 103 aa9.12□□□□□ -0.95
HERC6-202ENST00000273960 FAM222AQ5U5X8 452 aa9.11□□□□□ -0.95
HERC6-202ENST00000273960 SCXQ7RTU7 201 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms