RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 TMEM223A0PJW6 202 aa16.86■□□□□ 0.29
SSBP4-201ENST00000270061 A0A096LPF7 62 aa16.85■□□□□ 0.29
SSBP4-201ENST00000270061 TRAV8-6A0A0B4J262 113 aa16.84■□□□□ 0.29
SSBP4-201ENST00000270061 A0A1B0GUV1 79 aa16.84■□□□□ 0.29
SSBP4-201ENST00000270061 SEC11AP67812 179 aa16.84■□□□□ 0.29
SSBP4-201ENST00000270061 LBHQ53QV2 105 aaPredicted RBP16.84■□□□□ 0.29
SSBP4-201ENST00000270061 DNAH2Q9P225 4427 aa16.83■□□□□ 0.28
SSBP4-201ENST00000270061 MAPKAPK5-AS1Q8N8E1 139 aa16.83■□□□□ 0.28
SSBP4-201ENST00000270061 TTTY13Q9BZ97 58 aa16.83■□□□□ 0.28
SSBP4-201ENST00000270061 IGLV5-45A0A087WSX0 123 aa16.82■□□□□ 0.28
SSBP4-201ENST00000270061 EREGO14944 169 aa16.82■□□□□ 0.28
SSBP4-201ENST00000270061 HIGD1BQ9P298 99 aa16.82■□□□□ 0.28
SSBP4-201ENST00000270061 IGLV4-60A0A075B6I1 120 aa16.81■□□□□ 0.28
SSBP4-201ENST00000270061 LINC00242Q5T6M2 205 aa16.81■□□□□ 0.28
SSBP4-201ENST00000270061 GEMIN7Q9H840 131 aaKnown RBP16.81■□□□□ 0.28
SSBP4-201ENST00000270061 M0R2N4 97 aa16.8■□□□□ 0.28
SSBP4-201ENST00000270061 HERVK_113P63121 156 aa16.8■□□□□ 0.28
SSBP4-201ENST00000270061 MYMXA0A1B0GTQ4 84 aa16.79■□□□□ 0.28
SSBP4-201ENST00000270061 LEPROTO15243 131 aa16.79■□□□□ 0.28
SSBP4-201ENST00000270061 LELP1Q5T871 98 aa16.79■□□□□ 0.28
SSBP4-201ENST00000270061 TMEM262E9PQX1 116 aa16.77■□□□□ 0.28
SSBP4-201ENST00000270061 CCL18P55774 89 aa16.77■□□□□ 0.28
SSBP4-201ENST00000270061 TRAV13-1A0A0B4J241 112 aa16.77■□□□□ 0.27
SSBP4-201ENST00000270061 RBX1P62877 108 aa16.77■□□□□ 0.27
SSBP4-201ENST00000270061 LINC00469Q8N7U9 141 aa16.77■□□□□ 0.27
SSBP4-201ENST00000270061 PLEKHB2Q96CS7 222 aa16.77■□□□□ 0.27
SSBP4-201ENST00000270061 HECTD4Q9Y4D8 3996 aa16.76■□□□□ 0.27
SSBP4-201ENST00000270061 J3QQQ9 107 aa16.76■□□□□ 0.27
SSBP4-201ENST00000270061 COX6A2Q02221 97 aa16.76■□□□□ 0.27
SSBP4-201ENST00000270061 H3BRM9 83 aa16.75■□□□□ 0.27
SSBP4-201ENST00000270061 MPV17L2Q567V2 206 aa16.75■□□□□ 0.27
SSBP4-201ENST00000270061 CDKN2A-AS1Q9UH64 79 aa16.75■□□□□ 0.27
SSBP4-201ENST00000270061 IGHV1-58A0A0C4DH39 117 aa16.74■□□□□ 0.27
SSBP4-201ENST00000270061 HINT1P49773 126 aaPredicted RBP16.74■□□□□ 0.27
SSBP4-201ENST00000270061 LYPD5Q6UWN5 251 aa16.74■□□□□ 0.27
SSBP4-201ENST00000270061 FAT2Q9NYQ8 4349 aa16.74■□□□□ 0.27
SSBP4-201ENST00000270061 ZNF815PA8K554 130 aa16.74■□□□□ 0.27
SSBP4-201ENST00000270061 TSPEAR-AS2P59090 65 aa16.74■□□□□ 0.27
SSBP4-201ENST00000270061 LINC00588Q9Y4M8 146 aa16.73■□□□□ 0.27
SSBP4-201ENST00000270061 LGALS3P17931 250 aaKnown RBP16.72■□□□□ 0.27
SSBP4-201ENST00000270061 HSD52Q0P140 79 aa16.72■□□□□ 0.27
SSBP4-201ENST00000270061 Q6ZR54 194 aa16.72■□□□□ 0.27
SSBP4-201ENST00000270061 DNAH17Q9UFH2 4485 aa16.72■□□□□ 0.27
SSBP4-201ENST00000270061 IGHV3-30-3P0DP02 117 aa16.72■□□□□ 0.27
SSBP4-201ENST00000270061 BATFQ16520 125 aa16.72■□□□□ 0.27
SSBP4-201ENST00000270061 BVES-AS1Q5T3Y7 98 aa16.72■□□□□ 0.27
SSBP4-201ENST00000270061 LINC00336Q6ZUF6 198 aa16.72■□□□□ 0.27
SSBP4-201ENST00000270061 TRAV8-3A0A0A6YYJ7 113 aa16.69■□□□□ 0.26
SSBP4-201ENST00000270061 IGHV3-64A0A075B6Q5 118 aa16.69■□□□□ 0.26
SSBP4-201ENST00000270061 CCL25O15444 150 aa16.69■□□□□ 0.26
SSBP4-201ENST00000270061 SPINK8P0C7L1 97 aa16.69■□□□□ 0.26
SSBP4-201ENST00000270061 LINC00959A0A1B0GUT2 108 aa16.68■□□□□ 0.26
SSBP4-201ENST00000270061 TAL2Q16559 108 aa16.68■□□□□ 0.26
SSBP4-201ENST00000270061 IGLV5-39A0A0G2JS06 123 aa16.67■□□□□ 0.26
SSBP4-201ENST00000270061 RTL8CO15255 209 aa16.67■□□□□ 0.26
SSBP4-201ENST00000270061 COL5A1-AS1Q5SY13 56 aa16.67■□□□□ 0.26
SSBP4-201ENST00000270061 ESRGQ1W209 222 aa16.66■□□□□ 0.26
SSBP4-201ENST00000270061 SCGB1D4Q6XE38 83 aa16.65■□□□□ 0.26
SSBP4-201ENST00000270061 IGKV3OR2-268A0A0C4DH90 116 aa16.64■□□□□ 0.25
SSBP4-201ENST00000270061 NBDYA0A0U1RRE5 68 aa16.64■□□□□ 0.25
SSBP4-201ENST00000270061 SMIM1B2RUZ4 78 aa16.64■□□□□ 0.25
SSBP4-201ENST00000270061 IGHV3OR16-9A0A0B4J2B5 98 aa16.64■□□□□ 0.25
SSBP4-201ENST00000270061 SS18Q15532 418 aa16.64■□□□□ 0.25
SSBP4-201ENST00000270061 C1orf134Q5TEV5 83 aa16.64■□□□□ 0.25
SSBP4-201ENST00000270061 Q9H8V8 135 aa16.64■□□□□ 0.25
SSBP4-201ENST00000270061 ORAOV1Q8WV07 137 aa16.63■□□□□ 0.25
SSBP4-201ENST00000270061 LINC00269Q8N2A0 174 aa16.62■□□□□ 0.25
SSBP4-201ENST00000270061 UPK3BQ9BT76 320 aa16.62■□□□□ 0.25
SSBP4-201ENST00000270061 PKHD1P08F94 4074 aa16.62■□□□□ 0.25
SSBP4-201ENST00000270061 ANGP03950 147 aaKnown RBP16.61■□□□□ 0.25
SSBP4-201ENST00000270061 TM2D2Q9BX73 214 aa16.61■□□□□ 0.25
SSBP4-201ENST00000270061 CEND1Q8N111 149 aa16.6■□□□□ 0.25
SSBP4-201ENST00000270061 Q8N3U1 123 aa16.6■□□□□ 0.25
SSBP4-201ENST00000270061 NDUFA12Q9UI09 145 aa16.6■□□□□ 0.25
SSBP4-201ENST00000270061 A0A087WZ39 114 aa16.59■□□□□ 0.25
SSBP4-201ENST00000270061 REG3AQ06141 175 aa16.59■□□□□ 0.25
SSBP4-201ENST00000270061 SPANXB1Q9NS25 103 aaPredicted RBP16.59■□□□□ 0.25
SSBP4-201ENST00000270061 PKD1P98161 4303 aa16.59■□□□□ 0.25
SSBP4-201ENST00000270061 C10orf126Q8N4M7 172 aa16.59■□□□□ 0.25
SSBP4-201ENST00000270061 HIST1H4GQ99525 98 aa16.59■□□□□ 0.25
SSBP4-201ENST00000270061 LINC01561Q8N1V8 128 aa16.57■□□□□ 0.24
SSBP4-201ENST00000270061 PRR34Q9NV39 138 aa16.57■□□□□ 0.24
SSBP4-201ENST00000270061 A0A0J9YXY3 114 aa16.56■□□□□ 0.24
SSBP4-201ENST00000270061 NDUFA1O15239 70 aa16.56■□□□□ 0.24
SSBP4-201ENST00000270061 A0A1B0GVY2 172 aa16.56■□□□□ 0.24
SSBP4-201ENST00000270061 GCSHP23434 173 aa16.56■□□□□ 0.24
SSBP4-201ENST00000270061 TTC32Q5I0X7 151 aa16.56■□□□□ 0.24
SSBP4-201ENST00000270061 CLPSL2Q6UWE3 100 aa16.56■□□□□ 0.24
SSBP4-201ENST00000270061 C6orf223Q8N319 242 aa16.56■□□□□ 0.24
SSBP4-201ENST00000270061 A6NDN8 102 aa16.54■□□□□ 0.24
SSBP4-201ENST00000270061 CD164L2Q6UWJ8 174 aa16.54■□□□□ 0.24
SSBP4-201ENST00000270061 WFDC10BQ8IUB3 73 aa16.54■□□□□ 0.24
SSBP4-201ENST00000270061 XCL1P47992 114 aa16.54■□□□□ 0.24
SSBP4-201ENST00000270061 A0A1B0GV90 55 aa16.53■□□□□ 0.24
SSBP4-201ENST00000270061 FXYD2P54710 66 aa16.53■□□□□ 0.24
SSBP4-201ENST00000270061 SRSF9Q13242 221 aaKnown RBP eCLIP16.53■□□□□ 0.24
SSBP4-201ENST00000270061 KLK12Q9UKR0 248 aa16.52■□□□□ 0.24
SSBP4-201ENST00000270061 C5orf38Q86SI9 138 aa16.51■□□□□ 0.23
SSBP4-201ENST00000270061 CHCHD10Q8WYQ3 142 aaPredicted RBP16.51■□□□□ 0.23
SSBP4-201ENST00000270061 TMEM238C9JI98 176 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms