RNA–Protein interactions for RNA: ENST00000269886.7

SH3GL1-201, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL1, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-201ENST00000269886 LINC01600Q96MT4 127 aa17.06■□□□□ 0.32
SH3GL1-201ENST00000269886 CKS1BP61024 79 aa17.05■□□□□ 0.32
SH3GL1-201ENST00000269886 KRTAP1-1Q07627 177 aa17.05■□□□□ 0.32
SH3GL1-201ENST00000269886 SOSTDC1Q6X4U4 206 aa17.05■□□□□ 0.32
SH3GL1-201ENST00000269886 PRIMA1Q86XR5 153 aa17.05■□□□□ 0.32
SH3GL1-201ENST00000269886 C19orf73Q9NVV2 129 aa17.05■□□□□ 0.32
SH3GL1-201ENST00000269886 A0A1B0GV72 72 aa17.05■□□□□ 0.32
SH3GL1-201ENST00000269886 UBE2L6O14933 153 aa17.05■□□□□ 0.32
SH3GL1-201ENST00000269886 C16orf74Q96GX8 76 aa17.05■□□□□ 0.32
SH3GL1-201ENST00000269886 MTORP42345 2549 aa17.05■□□□□ 0.32
SH3GL1-201ENST00000269886 TMEM243Q9BU79 118 aa17.04■□□□□ 0.32
SH3GL1-201ENST00000269886 LST1O00453 97 aa17.03■□□□□ 0.32
SH3GL1-201ENST00000269886 IGLV1-51P01701 117 aa17.03■□□□□ 0.32
SH3GL1-201ENST00000269886 MEIG1Q5JSS6 88 aa17.03■□□□□ 0.32
SH3GL1-201ENST00000269886 CSNK1G2-AS1Q8NCQ2 148 aa17.02■□□□□ 0.31
SH3GL1-201ENST00000269886 UBE2WQ96B02 151 aa17.02■□□□□ 0.31
SH3GL1-201ENST00000269886 RNASE1P07998 156 aaKnown RBP17.01■□□□□ 0.31
SH3GL1-201ENST00000269886 CMC4P56277 68 aaPredicted RBP17.01■□□□□ 0.31
SH3GL1-201ENST00000269886 C16orf95Q9H693 158 aa17■□□□□ 0.31
SH3GL1-201ENST00000269886 PDZD2O15018 2839 aa17■□□□□ 0.31
SH3GL1-201ENST00000269886 TRGV4A0A0C4DH28 118 aa16.99■□□□□ 0.31
SH3GL1-201ENST00000269886 IGKV3OR2-268A0A0C4DH90 116 aa16.98■□□□□ 0.31
SH3GL1-201ENST00000269886 TRBV6-4A0A1B0GX49 114 aa16.98■□□□□ 0.31
SH3GL1-201ENST00000269886 H3BT86 120 aa16.98■□□□□ 0.31
SH3GL1-201ENST00000269886 GAGE6Q13070 117 aa16.98■□□□□ 0.31
SH3GL1-201ENST00000269886 OVOL2Q9BRP0 275 aa16.97■□□□□ 0.31
SH3GL1-201ENST00000269886 HELZ2Q9BYK8 2649 aaKnown RBP16.97■□□□□ 0.31
SH3GL1-201ENST00000269886 FAM110AQ9BQ89 295 aa16.96■□□□□ 0.3
SH3GL1-201ENST00000269886 TRAV8-4A0A0B4J246 113 aa16.95■□□□□ 0.3
SH3GL1-201ENST00000269886 ANK3Q12955 4377 aaKnown RBP16.94■□□□□ 0.3
SH3GL1-201ENST00000269886 FHL2Q14192 279 aa16.94■□□□□ 0.3
SH3GL1-201ENST00000269886 IGLV4-60A0A075B6I1 120 aa16.94■□□□□ 0.3
SH3GL1-201ENST00000269886 HERV-K104P63124 156 aa16.94■□□□□ 0.3
SH3GL1-201ENST00000269886 CRLF1O75462 422 aa16.93■□□□□ 0.3
SH3GL1-201ENST00000269886 COPS9Q8WXC6 57 aa16.92■□□□□ 0.3
SH3GL1-201ENST00000269886 CITED1Q99966 193 aa16.92■□□□□ 0.3
SH3GL1-201ENST00000269886 SHISA2Q6UWI4 295 aa16.92■□□□□ 0.3
SH3GL1-201ENST00000269886 TOMM7Q9P0U1 55 aa16.91■□□□□ 0.3
SH3GL1-201ENST00000269886 ITPR2Q14571 2701 aa16.91■□□□□ 0.3
SH3GL1-201ENST00000269886 COX7A2LO14548 114 aa16.91■□□□□ 0.3
SH3GL1-201ENST00000269886 TRBV6-8A0A0A6YYG3 113 aa16.9■□□□□ 0.3
SH3GL1-201ENST00000269886 COX7B2Q8TF08 81 aa16.9■□□□□ 0.3
SH3GL1-201ENST00000269886 CHCHD5Q9BSY4 110 aa16.9■□□□□ 0.3
SH3GL1-201ENST00000269886 SNCGO76070 127 aa16.88■□□□□ 0.29
SH3GL1-201ENST00000269886 DEFB130BP0DP73 79 aa16.88■□□□□ 0.29
SH3GL1-201ENST00000269886 DEFB130AP0DP74 79 aa16.88■□□□□ 0.29
SH3GL1-201ENST00000269886 MIR7-3HGQ8N6C7 128 aa16.86■□□□□ 0.29
SH3GL1-201ENST00000269886 HILS1P60008 231 aa16.85■□□□□ 0.29
SH3GL1-201ENST00000269886 IGHV3OR16-9A0A0B4J2B5 98 aa16.84■□□□□ 0.29
SH3GL1-201ENST00000269886 C15orf53Q8NAA6 179 aa16.84■□□□□ 0.29
SH3GL1-201ENST00000269886 FN1P02751 2386 aaKnown RBP16.84■□□□□ 0.29
SH3GL1-201ENST00000269886 GAGE2BQ13066 116 aa16.83■□□□□ 0.28
SH3GL1-201ENST00000269886 GAGE2EQ4V326 116 aa16.83■□□□□ 0.28
SH3GL1-201ENST00000269886 DEFB121Q5J5C9 76 aa16.83■□□□□ 0.28
SH3GL1-201ENST00000269886 GAGE2DQ9UEU5 116 aa16.83■□□□□ 0.28
SH3GL1-201ENST00000269886 KRTAP10-3P60369 221 aa16.82■□□□□ 0.28
SH3GL1-201ENST00000269886 C5orf38Q86SI9 138 aa16.82■□□□□ 0.28
SH3GL1-201ENST00000269886 FAM218AQ96MZ4 157 aa16.82■□□□□ 0.28
SH3GL1-201ENST00000269886 SMR3AQ99954 134 aa16.81■□□□□ 0.28
SH3GL1-201ENST00000269886 TRAV26-1A0A087WT03 109 aa16.81■□□□□ 0.28
SH3GL1-201ENST00000269886 LINC00158P58513 81 aa16.8■□□□□ 0.28
SH3GL1-201ENST00000269886 LINC00337Q8N6G1 96 aa16.8■□□□□ 0.28
SH3GL1-201ENST00000269886 ANAPC13Q9BS18 74 aa16.8■□□□□ 0.28
SH3GL1-201ENST00000269886 TTC32Q5I0X7 151 aa16.79■□□□□ 0.28
SH3GL1-201ENST00000269886 IGKV2-28A0A075B6P5 120 aa16.79■□□□□ 0.28
SH3GL1-201ENST00000269886 IGKV2D-28P01615 120 aa16.79■□□□□ 0.28
SH3GL1-201ENST00000269886 SND1-IT1Q9HBX3 110 aa16.79■□□□□ 0.28
SH3GL1-201ENST00000269886 PPDPFQ9H3Y8 114 aa16.78■□□□□ 0.28
SH3GL1-201ENST00000269886 A0A087WZ39 114 aa16.77■□□□□ 0.28
SH3GL1-201ENST00000269886 GYPEP15421 78 aa16.77■□□□□ 0.28
SH3GL1-201ENST00000269886 UNC79Q9P2D8 2635 aa16.77■□□□□ 0.28
SH3GL1-201ENST00000269886 CRPP02741 224 aa16.77■□□□□ 0.28
SH3GL1-201ENST00000269886 PF4P02776 101 aa16.77■□□□□ 0.28
SH3GL1-201ENST00000269886 GCN1Q92616 2671 aaKnown RBP16.77■□□□□ 0.27
SH3GL1-201ENST00000269886 NBEAL2Q6ZNJ1 2754 aa16.76■□□□□ 0.27
SH3GL1-201ENST00000269886 TRAV13-2A0A0B4J235 113 aa16.76■□□□□ 0.27
SH3GL1-201ENST00000269886 LINC00959A0A1B0GUT2 108 aa16.76■□□□□ 0.27
SH3GL1-201ENST00000269886 TRACP01848 142 aa16.76■□□□□ 0.27
SH3GL1-201ENST00000269886 KIR2DL5BQ8NHK3 375 aa16.76■□□□□ 0.27
SH3GL1-201ENST00000269886 PFN2P35080 140 aa16.75■□□□□ 0.27
SH3GL1-201ENST00000269886 FAM240AA0A1B0GVK7 77 aa16.75■□□□□ 0.27
SH3GL1-201ENST00000269886 CCL18P55774 89 aa16.74■□□□□ 0.27
SH3GL1-201ENST00000269886 C11orf68Q9H3H3 251 aaKnown RBP16.74■□□□□ 0.27
SH3GL1-201ENST00000269886 A0A096LPF7 62 aa16.74■□□□□ 0.27
SH3GL1-201ENST00000269886 BAALC-AS2P0C853 105 aa16.74■□□□□ 0.27
SH3GL1-201ENST00000269886 RPL28P46779 137 aaKnown RBP16.73■□□□□ 0.27
SH3GL1-201ENST00000269886 LINC00612Q8N6U2 182 aa16.73■□□□□ 0.27
SH3GL1-201ENST00000269886 LINC00482Q8N8I6 264 aa16.73■□□□□ 0.27
SH3GL1-201ENST00000269886 NHLRC4P0CG21 123 aaPredicted RBP16.73■□□□□ 0.27
SH3GL1-201ENST00000269886 X6R8D5 127 aa16.73■□□□□ 0.27
SH3GL1-201ENST00000269886 FAM222AQ5U5X8 452 aa16.72■□□□□ 0.27
SH3GL1-201ENST00000269886 Q9HAA7 133 aa16.72■□□□□ 0.27
SH3GL1-201ENST00000269886 XCL1P47992 114 aa16.72■□□□□ 0.27
SH3GL1-201ENST00000269886 C22orf24Q9Y442 160 aa16.72■□□□□ 0.27
SH3GL1-201ENST00000269886 HIVEP2P31629 2446 aa16.72■□□□□ 0.27
SH3GL1-201ENST00000269886 NDUFV3P56181 108 aaKnown RBP16.71■□□□□ 0.27
SH3GL1-201ENST00000269886 CLPSL2Q6UWE3 100 aa16.71■□□□□ 0.27
SH3GL1-201ENST00000269886 IBA57-AS1B1ANH7 110 aa16.71■□□□□ 0.27
SH3GL1-201ENST00000269886 SPATA3Q8NHX4 192 aa16.71■□□□□ 0.27
SH3GL1-201ENST00000269886 Q6Q795 121 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms