RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 TRAV4A0A0B4J268 109 aa14.39□□□□□ -0.11
CSPG5-201ENST00000264723 TINCRA0A1B0GVN0 87 aa14.39□□□□□ -0.11
CSPG5-201ENST00000264723 A0A0B4J2C4 111 aa14.39□□□□□ -0.11
CSPG5-201ENST00000264723 SPART-AS1P0CW21 52 aa14.39□□□□□ -0.11
CSPG5-201ENST00000264723 IFITM1P13164 125 aa14.39□□□□□ -0.11
CSPG5-201ENST00000264723 MIR7-3HGQ8N6C7 128 aa14.38□□□□□ -0.11
CSPG5-201ENST00000264723 UBE2D4Q9Y2X8 147 aa14.38□□□□□ -0.11
CSPG5-201ENST00000264723 ZNF561-AS1K7EIQ3 104 aa14.38□□□□□ -0.11
CSPG5-201ENST00000264723 SMCPP49901 116 aaPredicted RBP14.38□□□□□ -0.11
CSPG5-201ENST00000264723 TRBV10-1A0A0K0K1A3 114 aa14.37□□□□□ -0.11
CSPG5-201ENST00000264723 HILS1P60008 231 aa14.37□□□□□ -0.11
CSPG5-201ENST00000264723 SND1-IT1Q9HBX3 110 aa14.37□□□□□ -0.11
CSPG5-201ENST00000264723 FAM19A4Q96LR4 140 aa14.36□□□□□ -0.11
CSPG5-201ENST00000264723 LINC00694P0DN24 101 aa14.36□□□□□ -0.11
CSPG5-201ENST00000264723 UBE2D3P61077 147 aa14.36□□□□□ -0.11
CSPG5-201ENST00000264723 UBE2D2P62837 147 aa14.36□□□□□ -0.11
CSPG5-201ENST00000264723 HRNRQ86YZ3 2850 aaPredicted RBP14.35□□□□□ -0.11
CSPG5-201ENST00000264723 SPATA25Q9BR10 227 aa14.35□□□□□ -0.11
CSPG5-201ENST00000264723 PRO0255Q9UI72 69 aa14.35□□□□□ -0.11
CSPG5-201ENST00000264723 CRYBG3Q68DQ2 2970 aa14.35□□□□□ -0.11
CSPG5-201ENST00000264723 HIST1H4AP62805 103 aaKnown RBP14.35□□□□□ -0.11
CSPG5-201ENST00000264723 COX6A2Q02221 97 aa14.35□□□□□ -0.11
CSPG5-201ENST00000264723 KLK12Q9UKR0 248 aa14.34□□□□□ -0.11
CSPG5-201ENST00000264723 LINC00308Q8TCZ7 52 aa14.33□□□□□ -0.11
CSPG5-201ENST00000264723 TEX15Q9BXT5 2789 aa14.33□□□□□ -0.12
CSPG5-201ENST00000264723 MRPS36P82909 103 aaKnown RBP14.33□□□□□ -0.12
CSPG5-201ENST00000264723 MRPL23Q16540 153 aaKnown RBP14.33□□□□□ -0.12
CSPG5-201ENST00000264723 FAM110AQ9BQ89 295 aa14.32□□□□□ -0.12
CSPG5-201ENST00000264723 PYGO1Q9Y3Y4 419 aa14.32□□□□□ -0.12
CSPG5-201ENST00000264723 LAMTOR3Q9UHA4 124 aa14.32□□□□□ -0.12
CSPG5-201ENST00000264723 UBE2DNLQ8IWF7 75 aa14.32□□□□□ -0.12
CSPG5-201ENST00000264723 COX7B2Q8TF08 81 aa14.32□□□□□ -0.12
CSPG5-201ENST00000264723 EDA2RQ9HAV5 297 aa14.32□□□□□ -0.12
CSPG5-201ENST00000264723 PRO0461Q9UI25 63 aa14.31□□□□□ -0.12
CSPG5-201ENST00000264723 BRI3O95415 125 aa14.31□□□□□ -0.12
CSPG5-201ENST00000264723 CHCHD7Q9BUK0 85 aa14.31□□□□□ -0.12
CSPG5-201ENST00000264723 IGKV2D-24A0A075B6R9 120 aa14.3□□□□□ -0.12
CSPG5-201ENST00000264723 C1orf158Q8N1D5 194 aa14.3□□□□□ -0.12
CSPG5-201ENST00000264723 TRAV13-2A0A0B4J235 113 aa14.28□□□□□ -0.12
CSPG5-201ENST00000264723 COX7A2LO14548 114 aa14.28□□□□□ -0.12
CSPG5-201ENST00000264723 LINC00242Q5T6M2 205 aa14.28□□□□□ -0.12
CSPG5-201ENST00000264723 TRBV30A0A0K0K1B3 111 aa14.27□□□□□ -0.12
CSPG5-201ENST00000264723 LINC00269Q8N2A0 174 aa14.27□□□□□ -0.12
CSPG5-201ENST00000264723 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.26□□□□□ -0.13
CSPG5-201ENST00000264723 H7C423 109 aa14.26□□□□□ -0.13
CSPG5-201ENST00000264723 LECT2O14960 151 aa14.26□□□□□ -0.13
CSPG5-201ENST00000264723 PSCAO43653 123 aa14.26□□□□□ -0.13
CSPG5-201ENST00000264723 HERV-K104P63124 156 aa14.26□□□□□ -0.13
CSPG5-201ENST00000264723 CDIP1Q9H305 208 aa14.26□□□□□ -0.13
CSPG5-201ENST00000264723 H3BT86 120 aa14.25□□□□□ -0.13
CSPG5-201ENST00000264723 NBEAL2Q6ZNJ1 2754 aa14.25□□□□□ -0.13
CSPG5-201ENST00000264723 IGKV3D-7A0A0C4DH55 119 aa14.25□□□□□ -0.13
CSPG5-201ENST00000264723 OXLD1Q5BKU9 147 aa14.25□□□□□ -0.13
CSPG5-201ENST00000264723 CELSR1Q9NYQ6 3014 aa14.25□□□□□ -0.13
CSPG5-201ENST00000264723 SLPIP03973 132 aa14.25□□□□□ -0.13
CSPG5-201ENST00000264723 SPENQ96T58 3664 aaKnown RBP14.24□□□□□ -0.13
CSPG5-201ENST00000264723 FAM236AA0A1B0GUQ0 79 aa14.24□□□□□ -0.13
CSPG5-201ENST00000264723 FAM236BA0A1B0GV22 79 aa14.24□□□□□ -0.13
CSPG5-201ENST00000264723 AMELXQ99217 191 aa14.24□□□□□ -0.13
CSPG5-201ENST00000264723 CLUHP3Q96NS8 147 aa14.24□□□□□ -0.13
CSPG5-201ENST00000264723 UTP20O75691 2785 aaKnown RBP14.24□□□□□ -0.13
CSPG5-201ENST00000264723 NDUFA1O15239 70 aa14.24□□□□□ -0.13
CSPG5-201ENST00000264723 TRBV6-8A0A0A6YYG3 113 aa14.23□□□□□ -0.13
CSPG5-201ENST00000264723 PRB2P02812 416 aaPredicted RBP14.21□□□□□ -0.13
CSPG5-201ENST00000264723 INAFM2P0DMQ5 153 aa14.21□□□□□ -0.13
CSPG5-201ENST00000264723 IGLV1-51P01701 117 aa14.21□□□□□ -0.13
CSPG5-201ENST00000264723 TIRAPP58753 221 aa14.21□□□□□ -0.13
CSPG5-201ENST00000264723 LINC00526Q96FQ7 95 aa14.21□□□□□ -0.13
CSPG5-201ENST00000264723 GCN1Q92616 2671 aaKnown RBP14.21□□□□□ -0.14
CSPG5-201ENST00000264723 NDUFV3P56181 108 aaKnown RBP14.2□□□□□ -0.14
CSPG5-201ENST00000264723 KLK9Q2XQG4 91 aa14.2□□□□□ -0.14
CSPG5-201ENST00000264723 C9orf153Q5TBE3 101 aa14.2□□□□□ -0.14
CSPG5-201ENST00000264723 C14orf132Q9NPU4 83 aa14.2□□□□□ -0.14
CSPG5-201ENST00000264723 C1orf43Q9BWL3 253 aa14.2□□□□□ -0.14
CSPG5-201ENST00000264723 TRBV6-4A0A1B0GX49 114 aa14.19□□□□□ -0.14
CSPG5-201ENST00000264723 SPANXDQ9BXN6 97 aa14.19□□□□□ -0.14
CSPG5-201ENST00000264723 SPANXCQ9NY87 97 aa14.19□□□□□ -0.14
CSPG5-201ENST00000264723 LST1O00453 97 aa14.18□□□□□ -0.14
CSPG5-201ENST00000264723 UBR5O95071 2799 aaPredicted RBP14.18□□□□□ -0.14
CSPG5-201ENST00000264723 IGHV4-28A0A0C4DH34 117 aa14.18□□□□□ -0.14
CSPG5-201ENST00000264723 SMIM1B2RUZ4 78 aa14.18□□□□□ -0.14
CSPG5-201ENST00000264723 EIF4EBP3O60516 100 aaPredicted RBP14.18□□□□□ -0.14
CSPG5-201ENST00000264723 CAMK2N2Q96S95 79 aa14.18□□□□□ -0.14
CSPG5-201ENST00000264723 CUBNO60494 3623 aa14.17□□□□□ -0.14
CSPG5-201ENST00000264723 SPAG11BQ08648 103 aa14.17□□□□□ -0.14
CSPG5-201ENST00000264723 CDC42SE2Q9NRR3 84 aa14.17□□□□□ -0.14
CSPG5-201ENST00000264723 UNC79Q9P2D8 2635 aa14.17□□□□□ -0.14
CSPG5-201ENST00000264723 SMIM20Q8N5G0 67 aa14.17□□□□□ -0.14
CSPG5-201ENST00000264723 IGLV4-60A0A075B6I1 120 aa14.16□□□□□ -0.14
CSPG5-201ENST00000264723 REG3AQ06141 175 aa14.15□□□□□ -0.14
CSPG5-201ENST00000264723 HIGD2BQ4VC39 106 aa14.15□□□□□ -0.14
CSPG5-201ENST00000264723 C11orf72Q8NBR9 251 aa14.15□□□□□ -0.14
CSPG5-201ENST00000264723 NCR3O14931 201 aa14.14□□□□□ -0.15
CSPG5-201ENST00000264723 Q8N2B8 174 aa14.13□□□□□ -0.15
CSPG5-201ENST00000264723 CHCHD10Q8WYQ3 142 aaPredicted RBP14.13□□□□□ -0.15
CSPG5-201ENST00000264723 CCDC179H3BU77 68 aa14.12□□□□□ -0.15
CSPG5-201ENST00000264723 FHL3Q13643 280 aa14.12□□□□□ -0.15
CSPG5-201ENST00000264723 OVOL2Q9BRP0 275 aa14.12□□□□□ -0.15
CSPG5-201ENST00000264723 NTM-AS1Q6ZSK4 140 aa14.12□□□□□ -0.15
CSPG5-201ENST00000264723 NKAPP1Q8N9T2 125 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms