RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 TRAV8-3A0A0A6YYJ7 113 aa9.71□□□□□ -0.86
SDF2-201ENST00000247020 IGHV3OR16-9A0A0B4J2B5 98 aa9.71□□□□□ -0.86
SDF2-201ENST00000247020 SMIM1B2RUZ4 78 aa9.71□□□□□ -0.86
SDF2-201ENST00000247020 ANGP03950 147 aaKnown RBP9.71□□□□□ -0.86
SDF2-201ENST00000247020 ZFAND6Q6FIF0 208 aa9.71□□□□□ -0.86
SDF2-201ENST00000247020 HINT1P49773 126 aaPredicted RBP9.7□□□□□ -0.86
SDF2-201ENST00000247020 REG3AQ06141 175 aa9.7□□□□□ -0.86
SDF2-201ENST00000247020 ESRGQ1W209 222 aa9.7□□□□□ -0.86
SDF2-201ENST00000247020 BVES-AS1Q5T3Y7 98 aa9.7□□□□□ -0.86
SDF2-201ENST00000247020 SCGB1D4Q6XE38 83 aa9.7□□□□□ -0.86
SDF2-201ENST00000247020 PRR34Q9NV39 138 aa9.7□□□□□ -0.86
SDF2-201ENST00000247020 IGHV3-64A0A075B6Q5 118 aa9.69□□□□□ -0.86
SDF2-201ENST00000247020 A0A087WZ39 114 aa9.69□□□□□ -0.86
SDF2-201ENST00000247020 LINC00269Q8N2A0 174 aa9.69□□□□□ -0.86
SDF2-201ENST00000247020 SPANXB1Q9NS25 103 aaPredicted RBP9.69□□□□□ -0.86
SDF2-201ENST00000247020 IGKV3OR2-268A0A0C4DH90 116 aa9.68□□□□□ -0.86
SDF2-201ENST00000247020 BATFQ16520 125 aa9.67□□□□□ -0.86
SDF2-201ENST00000247020 COL5A1-AS1Q5SY13 56 aa9.67□□□□□ -0.86
SDF2-201ENST00000247020 CD164L2Q6UWJ8 174 aa9.67□□□□□ -0.86
SDF2-201ENST00000247020 NDUFA12Q9UI09 145 aa9.67□□□□□ -0.86
SDF2-201ENST00000247020 DNAH9Q9NYC9 4486 aa9.67□□□□□ -0.86
SDF2-201ENST00000247020 NDUFA1O15239 70 aa9.67□□□□□ -0.86
SDF2-201ENST00000247020 LINC01556Q5JQF7 62 aa9.67□□□□□ -0.86
SDF2-201ENST00000247020 WFDC10BQ8IUB3 73 aa9.67□□□□□ -0.86
SDF2-201ENST00000247020 ORAOV1Q8WV07 137 aa9.67□□□□□ -0.86
SDF2-201ENST00000247020 TRAV8-4A0A0B4J246 113 aa9.66□□□□□ -0.86
SDF2-201ENST00000247020 CEND1Q8N111 149 aa9.66□□□□□ -0.86
SDF2-201ENST00000247020 TM2D2Q9BX73 214 aa9.66□□□□□ -0.86
SDF2-201ENST00000247020 TMEM238C9JI98 176 aa9.65□□□□□ -0.86
SDF2-201ENST00000247020 SFTA2Q6UW10 78 aa9.65□□□□□ -0.86
SDF2-201ENST00000247020 Q8N3U1 123 aa9.65□□□□□ -0.86
SDF2-201ENST00000247020 HIST1H4GQ99525 98 aa9.65□□□□□ -0.86
SDF2-201ENST00000247020 A0A0J9YXY3 114 aa9.64□□□□□ -0.87
SDF2-201ENST00000247020 TIMM17BO60830 172 aa9.64□□□□□ -0.87
SDF2-201ENST00000247020 CRPP02741 224 aa9.64□□□□□ -0.87
SDF2-201ENST00000247020 CCL18P55774 89 aa9.64□□□□□ -0.87
SDF2-201ENST00000247020 HERV-K104P63124 156 aa9.64□□□□□ -0.87
SDF2-201ENST00000247020 MIAQ16674 131 aa9.64□□□□□ -0.87
SDF2-201ENST00000247020 CLPSL2Q6UWE3 100 aa9.64□□□□□ -0.87
SDF2-201ENST00000247020 C10orf126Q8N4M7 172 aa9.64□□□□□ -0.87
SDF2-201ENST00000247020 CHCHD10Q8WYQ3 142 aaPredicted RBP9.64□□□□□ -0.87
SDF2-201ENST00000247020 KLK12Q9UKR0 248 aa9.64□□□□□ -0.87
SDF2-201ENST00000247020 A6NDN8 102 aa9.63□□□□□ -0.87
SDF2-201ENST00000247020 IGLL5B9A064 214 aa9.63□□□□□ -0.87
SDF2-201ENST00000247020 DNAH10OSP0CZ25 163 aa9.63□□□□□ -0.87
SDF2-201ENST00000247020 XCL1P47992 114 aa9.63□□□□□ -0.87
SDF2-201ENST00000247020 COX7B2Q8TF08 81 aa9.63□□□□□ -0.87
SDF2-201ENST00000247020 UPK3BQ9BT76 320 aa9.63□□□□□ -0.87
SDF2-201ENST00000247020 IGHV3-30P01768 117 aa9.63□□□□□ -0.87
SDF2-201ENST00000247020 IGHV3-33P01772 117 aa9.63□□□□□ -0.87
SDF2-201ENST00000247020 IGHV3-30-5P0DP03 117 aa9.63□□□□□ -0.87
SDF2-201ENST00000247020 ENHOQ6UWT2 76 aa9.63□□□□□ -0.87
SDF2-201ENST00000247020 Q6ZVH6 145 aa9.63□□□□□ -0.87
SDF2-201ENST00000247020 COX7A2LO14548 114 aa9.62□□□□□ -0.87
SDF2-201ENST00000247020 GCSHP23434 173 aa9.62□□□□□ -0.87
SDF2-201ENST00000247020 SRSF9Q13242 221 aaKnown RBP eCLIP9.62□□□□□ -0.877e-6■■■■□ 19.5
SDF2-201ENST00000247020 C5orf38Q86SI9 138 aa9.62□□□□□ -0.87
SDF2-201ENST00000247020 ZNF625Q96I27 306 aaPredicted RBP9.62□□□□□ -0.87
SDF2-201ENST00000247020 COL7A1Q02388 2944 aa9.61□□□□□ -0.87
SDF2-201ENST00000247020 Q8IZM0 81 aa9.61□□□□□ -0.87
SDF2-201ENST00000247020 SPANXDQ9BXN6 97 aa9.61□□□□□ -0.87
SDF2-201ENST00000247020 Q9H8V8 135 aa9.61□□□□□ -0.87
SDF2-201ENST00000247020 SPANXCQ9NY87 97 aa9.61□□□□□ -0.87
SDF2-201ENST00000247020 LINC00588Q9Y4M8 146 aa9.61□□□□□ -0.87
SDF2-201ENST00000247020 TMEM238LA0A1B0GVL6 79 aa9.6□□□□□ -0.87
SDF2-201ENST00000247020 NUPR2A6NF83 97 aa9.6□□□□□ -0.87
SDF2-201ENST00000247020 A6NJY4 79 aa9.6□□□□□ -0.87
SDF2-201ENST00000247020 FOXI1Q12951 378 aa9.6□□□□□ -0.87
SDF2-201ENST00000247020 DNHD1Q96M86 4753 aa9.6□□□□□ -0.87
SDF2-201ENST00000247020 K7EP13 123 aa9.59□□□□□ -0.87
SDF2-201ENST00000247020 APOMO95445 188 aa9.59□□□□□ -0.87
SDF2-201ENST00000247020 FXYD2P54710 66 aa9.59□□□□□ -0.87
SDF2-201ENST00000247020 CIRBPQ14011 172 aaKnown RBP9.59□□□□□ -0.87
SDF2-201ENST00000247020 UBE2WQ96B02 151 aa9.59□□□□□ -0.87
SDF2-201ENST00000247020 LITAFQ99732 161 aa9.59□□□□□ -0.87
SDF2-201ENST00000247020 IGLV10-54A0A075B6I4 117 aa9.58□□□□□ -0.88
SDF2-201ENST00000247020 CXCL5P42830 114 aa9.58□□□□□ -0.88
SDF2-201ENST00000247020 PTTG1IPP53801 180 aa9.58□□□□□ -0.88
SDF2-201ENST00000247020 APLNQ9ULZ1 77 aa9.58□□□□□ -0.88
SDF2-201ENST00000247020 KLK5Q9Y337 293 aaPredicted RBP9.58□□□□□ -0.88
SDF2-201ENST00000247020 GAGE12HA6NDE8 117 aa9.57□□□□□ -0.88
SDF2-201ENST00000247020 PRSS2P07478 247 aa9.57□□□□□ -0.88
SDF2-201ENST00000247020 IFITM1P13164 125 aa9.57□□□□□ -0.88
SDF2-201ENST00000247020 MALP21145 153 aa9.57□□□□□ -0.88
SDF2-201ENST00000247020 PPDPFQ9H3Y8 114 aa9.57□□□□□ -0.88
SDF2-201ENST00000247020 TOMM7Q9P0U1 55 aa9.57□□□□□ -0.88
SDF2-201ENST00000247020 A0A1B0GWB2 263 aa9.56□□□□□ -0.88
SDF2-201ENST00000247020 COPS9Q8WXC6 57 aa9.56□□□□□ -0.88
SDF2-201ENST00000247020 SMIM13P0DJ93 91 aa9.55□□□□□ -0.88
SDF2-201ENST00000247020 RPL24P83731 157 aaKnown RBP9.55□□□□□ -0.88
SDF2-201ENST00000247020 C6orf226Q5I0X4 101 aa9.55□□□□□ -0.88
SDF2-201ENST00000247020 STAB2Q8WWQ8 2551 aa9.55□□□□□ -0.88
SDF2-201ENST00000247020 IBA57-AS1B1ANH7 110 aa9.54□□□□□ -0.88
SDF2-201ENST00000247020 TAX1BP3O14907 124 aa9.54□□□□□ -0.88
SDF2-201ENST00000247020 KIAA0087Q14695 138 aa9.54□□□□□ -0.88
SDF2-201ENST00000247020 MEIG1Q5JSS6 88 aa9.54□□□□□ -0.88
SDF2-201ENST00000247020 CFAP161Q6P656 301 aa9.54□□□□□ -0.88
SDF2-201ENST00000247020 KRTAP26-1Q6PEX3 210 aa9.54□□□□□ -0.88
SDF2-201ENST00000247020 C1orf43Q9BWL3 253 aa9.54□□□□□ -0.88
SDF2-201ENST00000247020 NHP2Q9NX24 153 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms