RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 TMEM89A2RUT3 159 aa9.97□□□□□ -0.81
NCLN-201ENST00000246117 CMC4P56277 68 aaPredicted RBP9.97□□□□□ -0.81
NCLN-201ENST00000246117 DAZ2Q13117 558 aaKnown RBP9.97□□□□□ -0.81
NCLN-201ENST00000246117 DAZ4Q86SG3 579 aaKnown RBP9.97□□□□□ -0.81
NCLN-201ENST00000246117 DAZ3Q9NR90 486 aaKnown RBP9.97□□□□□ -0.81
NCLN-201ENST00000246117 KIF25-AS1Q9Y6Z4 181 aa9.97□□□□□ -0.81
NCLN-201ENST00000246117 TRBV10-2A0A0K0K1G8 114 aa9.96□□□□□ -0.81
NCLN-201ENST00000246117 LINC00315P59091 139 aa9.96□□□□□ -0.81
NCLN-201ENST00000246117 DNAJC30Q96LL9 226 aa9.96□□□□□ -0.82
NCLN-201ENST00000246117 COX6A2Q02221 97 aa9.96□□□□□ -0.82
NCLN-201ENST00000246117 UBE2D4Q9Y2X8 147 aa9.96□□□□□ -0.82
NCLN-201ENST00000246117 LINC00308Q8TCZ7 52 aa9.95□□□□□ -0.82
NCLN-201ENST00000246117 C16orf74Q96GX8 76 aa9.95□□□□□ -0.82
NCLN-201ENST00000246117 LINC01006Q8NI28 216 aa9.94□□□□□ -0.82
NCLN-201ENST00000246117 KLK12Q9UKR0 248 aa9.94□□□□□ -0.82
NCLN-201ENST00000246117 UBE2D1P51668 147 aa9.94□□□□□ -0.82
NCLN-201ENST00000246117 HAMPP81172 84 aa9.94□□□□□ -0.82
NCLN-201ENST00000246117 MRAPQ8TCY5 172 aa9.94□□□□□ -0.82
NCLN-201ENST00000246117 UNC79Q9P2D8 2635 aa9.94□□□□□ -0.82
NCLN-201ENST00000246117 TRAV13-2A0A0B4J235 113 aa9.94□□□□□ -0.82
NCLN-201ENST00000246117 CELSR2Q9HCU4 2923 aa9.93□□□□□ -0.82
NCLN-201ENST00000246117 HRNRQ86YZ3 2850 aaPredicted RBP9.93□□□□□ -0.82
NCLN-201ENST00000246117 NCR3O14931 201 aa9.93□□□□□ -0.82
NCLN-201ENST00000246117 ODF3Q96PU9 254 aa9.93□□□□□ -0.82
NCLN-201ENST00000246117 CELSR1Q9NYQ6 3014 aa9.93□□□□□ -0.82
NCLN-201ENST00000246117 FAM236AA0A1B0GUQ0 79 aa9.93□□□□□ -0.82
NCLN-201ENST00000246117 FAM236BA0A1B0GV22 79 aa9.93□□□□□ -0.82
NCLN-201ENST00000246117 C9orf153Q5TBE3 101 aa9.93□□□□□ -0.82
NCLN-201ENST00000246117 FAM222AQ5U5X8 452 aa9.93□□□□□ -0.82
NCLN-201ENST00000246117 C14orf132Q9NPU4 83 aa9.93□□□□□ -0.82
NCLN-201ENST00000246117 LINC00269Q8N2A0 174 aa9.92□□□□□ -0.82
NCLN-201ENST00000246117 SETXQ7Z333 2677 aaKnown RBP9.92□□□□□ -0.82
NCLN-201ENST00000246117 A0A0B4J2C4 111 aa9.91□□□□□ -0.82
NCLN-201ENST00000246117 ITPR2Q14571 2701 aa9.91□□□□□ -0.82
NCLN-201ENST00000246117 ZNF561-AS1K7EIQ3 104 aa9.91□□□□□ -0.82
NCLN-201ENST00000246117 C1orf158Q8N1D5 194 aa9.91□□□□□ -0.82
NCLN-201ENST00000246117 LINC00242Q5T6M2 205 aa9.9□□□□□ -0.82
NCLN-201ENST00000246117 RNF152Q8N8N0 203 aa9.9□□□□□ -0.82
NCLN-201ENST00000246117 INAFM1C9JVW0 142 aa9.89□□□□□ -0.83
NCLN-201ENST00000246117 INAFM2P0DMQ5 153 aa9.89□□□□□ -0.83
NCLN-201ENST00000246117 TRAV25A0A0B4J276 109 aa9.89□□□□□ -0.83
NCLN-201ENST00000246117 CHCHD7Q9BUK0 85 aa9.89□□□□□ -0.83
NCLN-201ENST00000246117 FAM110AQ9BQ89 295 aa9.89□□□□□ -0.83
NCLN-201ENST00000246117 SMIM20Q8N5G0 67 aa9.88□□□□□ -0.83
NCLN-201ENST00000246117 MRPS36P82909 103 aaKnown RBP9.88□□□□□ -0.83
NCLN-201ENST00000246117 TRBV10-1A0A0K0K1A3 114 aa9.88□□□□□ -0.83
NCLN-201ENST00000246117 HERV-K104P63124 156 aa9.88□□□□□ -0.83
NCLN-201ENST00000246117 COX7A2LO14548 114 aa9.87□□□□□ -0.83
NCLN-201ENST00000246117 PRR3P79522 188 aaKnown RBP9.87□□□□□ -0.83
NCLN-201ENST00000246117 IGLV4-60A0A075B6I1 120 aa9.87□□□□□ -0.83
NCLN-201ENST00000246117 SMCPP49901 116 aaPredicted RBP9.87□□□□□ -0.83
NCLN-201ENST00000246117 DEFB105AQ8NG35 78 aa9.87□□□□□ -0.83
NCLN-201ENST00000246117 XAGE1AQ9HD64 81 aa9.87□□□□□ -0.83
NCLN-201ENST00000246117 HIGD2BQ4VC39 106 aa9.87□□□□□ -0.83
NCLN-201ENST00000246117 IGKV2D-24A0A075B6R9 120 aa9.86□□□□□ -0.83
NCLN-201ENST00000246117 ZNF575Q86XF7 245 aa9.86□□□□□ -0.83
NCLN-201ENST00000246117 PYGO1Q9Y3Y4 419 aa9.86□□□□□ -0.83
NCLN-201ENST00000246117 RPL32P62910 135 aaKnown RBP9.86□□□□□ -0.83
NCLN-201ENST00000246117 H7C423 109 aa9.85□□□□□ -0.83
NCLN-201ENST00000246117 TRBV6-8A0A0A6YYG3 113 aa9.85□□□□□ -0.83
NCLN-201ENST00000246117 UBE2D3P61077 147 aa9.85□□□□□ -0.83
NCLN-201ENST00000246117 UBE2D2P62837 147 aa9.85□□□□□ -0.83
NCLN-201ENST00000246117 PRO0255Q9UI72 69 aa9.85□□□□□ -0.83
NCLN-201ENST00000246117 H3BT86 120 aa9.85□□□□□ -0.83
NCLN-201ENST00000246117 RPL18AQ02543 176 aaKnown RBP9.85□□□□□ -0.83
NCLN-201ENST00000246117 STAB1Q9NY15 2570 aa9.84□□□□□ -0.83
NCLN-201ENST00000246117 NDUFA1O15239 70 aa9.84□□□□□ -0.83
NCLN-201ENST00000246117 C9orf116Q5BN46 136 aaPredicted RBP9.84□□□□□ -0.83
NCLN-201ENST00000246117 APOC4P55056 127 aa9.84□□□□□ -0.83
NCLN-201ENST00000246117 SDIM1Q6ZPB5 146 aa9.84□□□□□ -0.83
NCLN-201ENST00000246117 CLUHP3Q96NS8 147 aa9.84□□□□□ -0.83
NCLN-201ENST00000246117 SPENQ96T58 3664 aaKnown RBP9.83□□□□□ -0.84
NCLN-201ENST00000246117 TRBV30A0A0K0K1B3 111 aa9.83□□□□□ -0.84
NCLN-201ENST00000246117 SPAG11BQ08648 103 aa9.83□□□□□ -0.84
NCLN-201ENST00000246117 SMIM1B2RUZ4 78 aa9.83□□□□□ -0.84
NCLN-201ENST00000246117 CDC42SE2Q9NRR3 84 aa9.83□□□□□ -0.84
NCLN-201ENST00000246117 ORMDL1Q9P0S3 153 aa9.82□□□□□ -0.84
NCLN-201ENST00000246117 FAM19A4Q96LR4 140 aa9.82□□□□□ -0.84
NCLN-201ENST00000246117 NDUFV3P56181 108 aaKnown RBP9.81□□□□□ -0.84
NCLN-201ENST00000246117 SPATA25Q9BR10 227 aa9.81□□□□□ -0.84
NCLN-201ENST00000246117 EIF4EBP3O60516 100 aaPredicted RBP9.81□□□□□ -0.84
NCLN-201ENST00000246117 TIRAPP58753 221 aa9.81□□□□□ -0.84
NCLN-201ENST00000246117 SPANXCQ9NY87 97 aa9.81□□□□□ -0.84
NCLN-201ENST00000246117 COL6A5A8TX70 2615 aa9.81□□□□□ -0.84
NCLN-201ENST00000246117 IGHV4-28A0A0C4DH34 117 aa9.8□□□□□ -0.84
NCLN-201ENST00000246117 SPART-AS1P0CW21 52 aa9.8□□□□□ -0.84
NCLN-201ENST00000246117 MRPL23Q16540 153 aaKnown RBP9.8□□□□□ -0.84
NCLN-201ENST00000246117 CAMK2N2Q96S95 79 aa9.8□□□□□ -0.84
NCLN-201ENST00000246117 AMELXQ99217 191 aa9.8□□□□□ -0.84
NCLN-201ENST00000246117 CHCHD10Q8WYQ3 142 aaPredicted RBP9.8□□□□□ -0.84
NCLN-201ENST00000246117 LST1O00453 97 aa9.79□□□□□ -0.84
NCLN-201ENST00000246117 PRB2P02812 416 aaPredicted RBP9.79□□□□□ -0.84
NCLN-201ENST00000246117 REG3AQ06141 175 aa9.79□□□□□ -0.84
NCLN-201ENST00000246117 Q8N2B8 174 aa9.79□□□□□ -0.84
NCLN-201ENST00000246117 OVOL2Q9BRP0 275 aa9.79□□□□□ -0.84
NCLN-201ENST00000246117 UBL5Q9BZL1 73 aa9.79□□□□□ -0.84
NCLN-201ENST00000246117 A0A1B0GX51 115 aa9.78□□□□□ -0.84
NCLN-201ENST00000246117 CCDC179H3BU77 68 aa9.78□□□□□ -0.84
NCLN-201ENST00000246117 NTM-AS1Q6ZSK4 140 aa9.78□□□□□ -0.84
NCLN-201ENST00000246117 LINC01546A6NGU7 62 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms