RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 WFDC11Q8NEX6 87 aa5.57□□□□□ -1.52
CXCR4-201ENST00000241393 LINC01600Q96MT4 127 aa5.57□□□□□ -1.52
CXCR4-201ENST00000241393 ESM1Q9NQ30 184 aa5.57□□□□□ -1.52
CXCR4-201ENST00000241393 YAE1D1Q9NRH1 226 aa5.57□□□□□ -1.52
CXCR4-201ENST00000241393 CHD6Q8TD26 2715 aa5.57□□□□□ -1.52
CXCR4-201ENST00000241393 KMT2BQ9UMN6 2715 aaPredicted RBP5.57□□□□□ -1.52
CXCR4-201ENST00000241393 MXRA5Q9NR99 2828 aa5.57□□□□□ -1.52
CXCR4-201ENST00000241393 IGHV3-64A0A075B6Q5 118 aa5.56□□□□□ -1.52
CXCR4-201ENST00000241393 K7EQD1 137 aa5.56□□□□□ -1.52
CXCR4-201ENST00000241393 TCL1BO95988 128 aa5.56□□□□□ -1.52
CXCR4-201ENST00000241393 HERVK_113P63121 156 aa5.56□□□□□ -1.52
CXCR4-201ENST00000241393 MIAQ16674 131 aa5.56□□□□□ -1.52
CXCR4-201ENST00000241393 CEMP1Q6PRD7 247 aaPredicted RBP5.56□□□□□ -1.52
CXCR4-201ENST00000241393 TEN1Q86WV5 123 aa5.56□□□□□ -1.52
CXCR4-201ENST00000241393 SIGMAR1Q99720 223 aa5.56□□□□□ -1.52
CXCR4-201ENST00000241393 Q9UF83 564 aa5.56□□□□□ -1.52
CXCR4-201ENST00000241393 TRGV1A0A0A0MS02 117 aa5.56□□□□□ -1.52
CXCR4-201ENST00000241393 TRAV8-3A0A0A6YYJ7 113 aa5.56□□□□□ -1.52
CXCR4-201ENST00000241393 TRBV30A0A0K0K1B3 111 aa5.56□□□□□ -1.52
CXCR4-201ENST00000241393 NDUFA1O15239 70 aa5.56□□□□□ -1.52
CXCR4-201ENST00000241393 SCGB1C2P0DMR2 95 aa5.56□□□□□ -1.52
CXCR4-201ENST00000241393 LINC01006Q8NI28 216 aa5.56□□□□□ -1.52
CXCR4-201ENST00000241393 PPDPFLQ8WWR9 84 aa5.56□□□□□ -1.52
CXCR4-201ENST00000241393 C16orf74Q96GX8 76 aa5.56□□□□□ -1.52
CXCR4-201ENST00000241393 GTSF1LQ9H1H1 148 aa5.56□□□□□ -1.52
CXCR4-201ENST00000241393 H7C423 109 aa5.55□□□□□ -1.52
CXCR4-201ENST00000241393 J3QKU1 62 aa5.55□□□□□ -1.52
CXCR4-201ENST00000241393 IGLV1-51P01701 117 aa5.55□□□□□ -1.52
CXCR4-201ENST00000241393 KRTAP1-1Q07627 177 aa5.55□□□□□ -1.52
CXCR4-201ENST00000241393 COPS9Q8WXC6 57 aa5.55□□□□□ -1.52
CXCR4-201ENST00000241393 PPDPFQ9H3Y8 114 aa5.55□□□□□ -1.52
CXCR4-201ENST00000241393 TEX15Q9BXT5 2789 aa5.54□□□□□ -1.52
CXCR4-201ENST00000241393 IGHV3OR16-12A0A075B7B8 117 aa5.54□□□□□ -1.52
CXCR4-201ENST00000241393 IGHV3-38A0A0C4DH36 116 aa5.54□□□□□ -1.52
CXCR4-201ENST00000241393 NDUFA7O95182 113 aa5.54□□□□□ -1.52
CXCR4-201ENST00000241393 SPINK8P0C7L1 97 aa5.54□□□□□ -1.52
CXCR4-201ENST00000241393 CIRBPQ14011 172 aaKnown RBP5.54□□□□□ -1.52
CXCR4-201ENST00000241393 ATXN8Q156A1 80 aa5.54□□□□□ -1.52
CXCR4-201ENST00000241393 RNASE13Q5GAN3 156 aaKnown RBP5.54□□□□□ -1.52
CXCR4-201ENST00000241393 MTURNQ8N3F0 131 aa5.54□□□□□ -1.52
CXCR4-201ENST00000241393 OVOL2Q9BRP0 275 aa5.54□□□□□ -1.52
CXCR4-201ENST00000241393 CDKN2A-AS1Q9UH64 79 aa5.54□□□□□ -1.52
CXCR4-201ENST00000241393 TRBV6-4A0A1B0GX49 114 aa5.53□□□□□ -1.52
CXCR4-201ENST00000241393 GIG44P09565 113 aaPredicted RBP5.53□□□□□ -1.52
CXCR4-201ENST00000241393 LINC00242Q5T6M2 205 aa5.53□□□□□ -1.52
CXCR4-201ENST00000241393 Q6ZTI0 123 aa5.53□□□□□ -1.52
CXCR4-201ENST00000241393 ZNF418Q8TF45 676 aaPredicted RBP5.53□□□□□ -1.52
CXCR4-201ENST00000241393 TMEM101Q96IK0 257 aa5.53□□□□□ -1.52
CXCR4-201ENST00000241393 APCP25054 2843 aa5.53□□□□□ -1.52
CXCR4-201ENST00000241393 SMIM1B2RUZ4 78 aa5.53□□□□□ -1.52
CXCR4-201ENST00000241393 SLC25A20O43772 301 aa5.53□□□□□ -1.52
CXCR4-201ENST00000241393 COX6CP09669 75 aa5.53□□□□□ -1.52
CXCR4-201ENST00000241393 Q1RN00 199 aa5.53□□□□□ -1.52
CXCR4-201ENST00000241393 ADAMTSL4-AS1Q5T5F5 129 aa5.53□□□□□ -1.52
CXCR4-201ENST00000241393 SFTA2Q6UW10 78 aa5.53□□□□□ -1.52
CXCR4-201ENST00000241393 CDC42SE2Q9NRR3 84 aa5.53□□□□□ -1.52
CXCR4-201ENST00000241393 ITPR3Q14573 2671 aa5.52□□□□□ -1.53
CXCR4-201ENST00000241393 PLAC8L1A1L4L8 177 aa5.52□□□□□ -1.53
CXCR4-201ENST00000241393 INSL3P51460 131 aa5.52□□□□□ -1.53
CXCR4-201ENST00000241393 HILS1P60008 231 aa5.52□□□□□ -1.53
CXCR4-201ENST00000241393 HERV-K104P63124 156 aa5.52□□□□□ -1.53
CXCR4-201ENST00000241393 NTM-AS1Q6ZSK4 140 aa5.52□□□□□ -1.53
CXCR4-201ENST00000241393 TMEM243Q9BU79 118 aa5.52□□□□□ -1.53
CXCR4-201ENST00000241393 TLN2Q9Y4G6 2542 aa5.52□□□□□ -1.53
CXCR4-201ENST00000241393 HELZ2Q9BYK8 2649 aaKnown RBP5.51□□□□□ -1.53
CXCR4-201ENST00000241393 IGLV9-49A0A0B4J1Y8 123 aa5.51□□□□□ -1.53
CXCR4-201ENST00000241393 TMEM262E9PQX1 116 aa5.51□□□□□ -1.53
CXCR4-201ENST00000241393 LINC01620Q4KN68 170 aa5.51□□□□□ -1.53
CXCR4-201ENST00000241393 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.51□□□□□ -1.53
CXCR4-201ENST00000241393 CSNK1G2-AS1Q8NCQ2 148 aa5.51□□□□□ -1.53
CXCR4-201ENST00000241393 CARD19Q96LW7 228 aa5.51□□□□□ -1.53
CXCR4-201ENST00000241393 Q9H8V8 135 aa5.51□□□□□ -1.53
CXCR4-201ENST00000241393 NOP10Q9NPE3 64 aaKnown RBP5.51□□□□□ -1.53
CXCR4-201ENST00000241393 ICOSQ9Y6W8 199 aa5.51□□□□□ -1.53
CXCR4-201ENST00000241393 TENM4Q6N022 2769 aa5.51□□□□□ -1.53
CXCR4-201ENST00000241393 CSMD2Q7Z408 3487 aa5.5□□□□□ -1.53
CXCR4-201ENST00000241393 TRBV10-2A0A0K0K1G8 114 aa5.5□□□□□ -1.53
CXCR4-201ENST00000241393 C9JAW5 83 aa5.5□□□□□ -1.53
CXCR4-201ENST00000241393 LINC00694P0DN24 101 aa5.5□□□□□ -1.53
CXCR4-201ENST00000241393 COX6A2Q02221 97 aa5.5□□□□□ -1.53
CXCR4-201ENST00000241393 ANKRD29Q8N6D5 301 aa5.5□□□□□ -1.53
CXCR4-201ENST00000241393 TRGV2A0A075B6R0 118 aa5.5□□□□□ -1.53
CXCR4-201ENST00000241393 F5H768 121 aa5.5□□□□□ -1.53
CXCR4-201ENST00000241393 H3BT86 120 aa5.5□□□□□ -1.53
CXCR4-201ENST00000241393 H7C2G1 150 aa5.5□□□□□ -1.53
CXCR4-201ENST00000241393 UBE2L6O14933 153 aa5.5□□□□□ -1.53
CXCR4-201ENST00000241393 RPL13AP40429 203 aaKnown RBP5.5□□□□□ -1.53
CXCR4-201ENST00000241393 SMIM29Q86T20 159 aa5.5□□□□□ -1.53
CXCR4-201ENST00000241393 ZNF625Q96I27 306 aaPredicted RBP5.5□□□□□ -1.53
CXCR4-201ENST00000241393 SONP18583 2426 aaKnown RBP5.49□□□□□ -1.53
CXCR4-201ENST00000241393 CCDC168Q8NDH2 2452 aa5.49□□□□□ -1.53
CXCR4-201ENST00000241393 KIR2DL5BQ8NHK3 375 aa5.49□□□□□ -1.53
CXCR4-201ENST00000241393 LINC00308Q8TCZ7 52 aa5.49□□□□□ -1.53
CXCR4-201ENST00000241393 TRAV13-1A0A0B4J241 112 aa5.48□□□□□ -1.53
CXCR4-201ENST00000241393 TRGV4A0A0C4DH28 118 aa5.48□□□□□ -1.53
CXCR4-201ENST00000241393 LST1O00453 97 aa5.48□□□□□ -1.53
CXCR4-201ENST00000241393 RPL35AP18077 110 aaKnown RBP5.48□□□□□ -1.53
CXCR4-201ENST00000241393 LINC00612Q8N6U2 182 aa5.48□□□□□ -1.53
CXCR4-201ENST00000241393 FLNAP21333 2647 aaKnown RBP5.48□□□□□ -1.53
CXCR4-201ENST00000241393 WNK1Q9H4A3 2382 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms