RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 F5H768 121 aa11.4□□□□□ -0.59
UBE3D-201ENST00000237186 SCGB1C2P0DMR2 95 aa11.4□□□□□ -0.59
UBE3D-201ENST00000237186 MTURNQ8N3F0 131 aa11.4□□□□□ -0.59
UBE3D-201ENST00000237186 NOTCH3Q9UM47 2321 aa11.39□□□□□ -0.59
UBE3D-201ENST00000237186 TRBV6-8A0A0A6YYG3 113 aa11.39□□□□□ -0.59
UBE3D-201ENST00000237186 TRBV30A0A0K0K1B3 111 aa11.39□□□□□ -0.59
UBE3D-201ENST00000237186 CIRBPQ14011 172 aaKnown RBP11.39□□□□□ -0.59
UBE3D-201ENST00000237186 C9orf66Q5T8R8 295 aa11.39□□□□□ -0.59
UBE3D-201ENST00000237186 Q9H8V8 135 aa11.38□□□□□ -0.59
UBE3D-201ENST00000237186 X6R8D5 127 aa11.38□□□□□ -0.59
UBE3D-201ENST00000237186 C2CD3Q4AC94 2353 aa11.38□□□□□ -0.59
UBE3D-201ENST00000237186 M0QXV9 152 aa11.37□□□□□ -0.59
UBE3D-201ENST00000237186 ZNF625Q96I27 306 aaPredicted RBP11.37□□□□□ -0.59
UBE3D-201ENST00000237186 HERV-K104P63124 156 aa11.35□□□□□ -0.59
UBE3D-201ENST00000237186 FOXI1Q12951 378 aa11.35□□□□□ -0.59
UBE3D-201ENST00000237186 PPDPFQ9H3Y8 114 aa11.35□□□□□ -0.59
UBE3D-201ENST00000237186 LINC01600Q96MT4 127 aa11.34□□□□□ -0.59
UBE3D-201ENST00000237186 H7C2G1 150 aa11.34□□□□□ -0.59
UBE3D-201ENST00000237186 DEFB130BP0DP73 79 aa11.34□□□□□ -0.59
UBE3D-201ENST00000237186 DEFB130AP0DP74 79 aa11.34□□□□□ -0.59
UBE3D-201ENST00000237186 GAGE6Q13070 117 aa11.34□□□□□ -0.59
UBE3D-201ENST00000237186 TEN1Q86WV5 123 aa11.34□□□□□ -0.59
UBE3D-201ENST00000237186 LINC00308Q8TCZ7 52 aa11.34□□□□□ -0.59
UBE3D-201ENST00000237186 COPS9Q8WXC6 57 aa11.34□□□□□ -0.59
UBE3D-201ENST00000237186 Q1RN00 199 aa11.33□□□□□ -0.6
UBE3D-201ENST00000237186 SPATA3Q8NHX4 192 aa11.33□□□□□ -0.6
UBE3D-201ENST00000237186 TRIAP1O43715 76 aa11.32□□□□□ -0.6
UBE3D-201ENST00000237186 ATXN8Q156A1 80 aa11.32□□□□□ -0.6
UBE3D-201ENST00000237186 IGLV4-60A0A075B6I1 120 aa11.32□□□□□ -0.6
UBE3D-201ENST00000237186 LYRM9A8MSI8 78 aa11.32□□□□□ -0.6
UBE3D-201ENST00000237186 CITED1Q99966 193 aa11.32□□□□□ -0.6
UBE3D-201ENST00000237186 SPATA25Q9BR10 227 aa11.32□□□□□ -0.6
UBE3D-201ENST00000237186 F8P00451 2351 aa11.31□□□□□ -0.6
UBE3D-201ENST00000237186 NPC2P61916 151 aa11.31□□□□□ -0.6
UBE3D-201ENST00000237186 PRIMA1Q86XR5 153 aa11.31□□□□□ -0.6
UBE3D-201ENST00000237186 DAND5Q8N907 189 aa11.31□□□□□ -0.6
UBE3D-201ENST00000237186 CHCHD5Q9BSY4 110 aa11.31□□□□□ -0.6
UBE3D-201ENST00000237186 ICOSQ9Y6W8 199 aa11.31□□□□□ -0.6
UBE3D-201ENST00000237186 GAGE12HA6NDE8 117 aa11.3□□□□□ -0.6
UBE3D-201ENST00000237186 PPDPFLQ8WWR9 84 aa11.3□□□□□ -0.6
UBE3D-201ENST00000237186 PRO0255Q9UI72 69 aa11.3□□□□□ -0.6
UBE3D-201ENST00000237186 IGHV3OR16-9A0A0B4J2B5 98 aa11.29□□□□□ -0.6
UBE3D-201ENST00000237186 SLC25A20O43772 301 aa11.29□□□□□ -0.6
UBE3D-201ENST00000237186 A0A1B0GUV1 79 aa11.29□□□□□ -0.6
UBE3D-201ENST00000237186 COX6CP09669 75 aa11.29□□□□□ -0.6
UBE3D-201ENST00000237186 GYPEP15421 78 aa11.29□□□□□ -0.6
UBE3D-201ENST00000237186 LINC01620Q4KN68 170 aa11.28□□□□□ -0.6
UBE3D-201ENST00000237186 WFDC9Q8NEX5 89 aa11.28□□□□□ -0.6
UBE3D-201ENST00000237186 CARD19Q96LW7 228 aa11.28□□□□□ -0.6
UBE3D-201ENST00000237186 C9JAW5 83 aa11.27□□□□□ -0.6
UBE3D-201ENST00000237186 APOC4P55056 127 aa11.27□□□□□ -0.6
UBE3D-201ENST00000237186 C21orf62-AS1Q17RA5 79 aa11.27□□□□□ -0.6
UBE3D-201ENST00000237186 SOSTDC1Q6X4U4 206 aa11.27□□□□□ -0.6
UBE3D-201ENST00000237186 COX7B2Q8TF08 81 aa11.27□□□□□ -0.6
UBE3D-201ENST00000237186 A0A087WZ39 114 aa11.27□□□□□ -0.61
UBE3D-201ENST00000237186 MEIG1Q5JSS6 88 aa11.27□□□□□ -0.61
UBE3D-201ENST00000237186 FAM222AQ5U5X8 452 aa11.27□□□□□ -0.61
UBE3D-201ENST00000237186 RPL13AP40429 203 aaKnown RBP11.26□□□□□ -0.61
UBE3D-201ENST00000237186 SIGMAR1Q99720 223 aa11.26□□□□□ -0.61
UBE3D-201ENST00000237186 TRBV10-2A0A0K0K1G8 114 aa11.25□□□□□ -0.61
UBE3D-201ENST00000237186 WIPF1O43516 503 aa11.25□□□□□ -0.61
UBE3D-201ENST00000237186 ANKRD29Q8N6D5 301 aa11.25□□□□□ -0.61
UBE3D-201ENST00000237186 VWFP04275 2813 aa11.24□□□□□ -0.61
UBE3D-201ENST00000237186 LINC00959A0A1B0GUT2 108 aa11.24□□□□□ -0.61
UBE3D-201ENST00000237186 A0A0U1RRA0 63 aa11.23□□□□□ -0.61
UBE3D-201ENST00000237186 LST1O00453 97 aa11.23□□□□□ -0.61
UBE3D-201ENST00000237186 PAX4O43316 350 aa11.23□□□□□ -0.61
UBE3D-201ENST00000237186 DEFB135Q30KP9 77 aa11.23□□□□□ -0.61
UBE3D-201ENST00000237186 SHISA2Q6UWI4 295 aa11.23□□□□□ -0.61
UBE3D-201ENST00000237186 IGKV3OR2-268A0A0C4DH90 116 aa11.22□□□□□ -0.61
UBE3D-201ENST00000237186 IGHV4-28A0A0C4DH34 117 aa11.21□□□□□ -0.61
UBE3D-201ENST00000237186 LINC01561Q8N1V8 128 aa11.21□□□□□ -0.61
UBE3D-201ENST00000237186 BAHCC1Q9P281 2608 aa11.21□□□□□ -0.62
UBE3D-201ENST00000237186 MIFP14174 115 aa11.21□□□□□ -0.62
UBE3D-201ENST00000237186 TENM1Q9UKZ4 2725 aa11.21□□□□□ -0.62
UBE3D-201ENST00000237186 TMEM262E9PQX1 116 aa11.2□□□□□ -0.62
UBE3D-201ENST00000237186 SCGB1A1P11684 91 aa11.2□□□□□ -0.62
UBE3D-201ENST00000237186 Q8NAQ8 132 aa11.2□□□□□ -0.62
UBE3D-201ENST00000237186 CDIP1Q9H305 208 aa11.2□□□□□ -0.62
UBE3D-201ENST00000237186 IBA57-AS1B1ANH7 110 aa11.19□□□□□ -0.62
UBE3D-201ENST00000237186 H3BT86 120 aa11.19□□□□□ -0.62
UBE3D-201ENST00000237186 ATRQ13535 2644 aa11.19□□□□□ -0.62
UBE3D-201ENST00000237186 TRAV26-1A0A087WT03 109 aa11.19□□□□□ -0.62
UBE3D-201ENST00000237186 SS18Q15532 418 aa11.19□□□□□ -0.62
UBE3D-201ENST00000237186 C5orf38Q86SI9 138 aa11.19□□□□□ -0.62
UBE3D-201ENST00000237186 TOMM7Q9P0U1 55 aa11.19□□□□□ -0.62
UBE3D-201ENST00000237186 CYSRT1A8MQ03 144 aa11.18□□□□□ -0.62
UBE3D-201ENST00000237186 COX7A2LO14548 114 aa11.18□□□□□ -0.62
UBE3D-201ENST00000237186 DAD1P61803 113 aa11.18□□□□□ -0.62
UBE3D-201ENST00000237186 MIR7-3HGQ8N6C7 128 aa11.18□□□□□ -0.62
UBE3D-201ENST00000237186 CLEC2BQ92478 149 aa11.18□□□□□ -0.62
UBE3D-201ENST00000237186 TEP1Q99973 2627 aaKnown RBP11.17□□□□□ -0.62
UBE3D-201ENST00000237186 TRAV13-2A0A0B4J235 113 aa11.17□□□□□ -0.62
UBE3D-201ENST00000237186 ATP5G1P05496 136 aa11.17□□□□□ -0.62
UBE3D-201ENST00000237186 DEFB4AO15263 64 aa11.16□□□□□ -0.62
UBE3D-201ENST00000237186 C2orf82Q6UX34 121 aa11.16□□□□□ -0.62
UBE3D-201ENST00000237186 NTN5Q8WTR8 489 aaPredicted RBP11.16□□□□□ -0.62
UBE3D-201ENST00000237186 NBEAL2Q6ZNJ1 2754 aa11.16□□□□□ -0.62
UBE3D-201ENST00000237186 SPART-AS1P0CW21 52 aa11.15□□□□□ -0.62
UBE3D-201ENST00000237186 TRRAPQ9Y4A5 3859 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms