RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 NAV2Q8IVL1 2488 aa6.81□□□□□ -1.32
HLA-DOA-201ENST00000229829 ZNF462Q96JM2 2506 aa6.81□□□□□ -1.32
HLA-DOA-201ENST00000229829 NBPF19A0A087WUL8 3843 aa6.81□□□□□ -1.32
HLA-DOA-201ENST00000229829 TRAV23DV6A0A075B6W5 121 aa6.81□□□□□ -1.32
HLA-DOA-201ENST00000229829 C20orf197Q8N268 126 aa6.81□□□□□ -1.32
HLA-DOA-201ENST00000229829 IMUPQ9GZP8 106 aa6.81□□□□□ -1.32
HLA-DOA-201ENST00000229829 TOMM7Q9P0U1 55 aa6.81□□□□□ -1.32
HLA-DOA-201ENST00000229829 ATP5G1P05496 136 aa6.8□□□□□ -1.32
HLA-DOA-201ENST00000229829 Q8N2B8 174 aa6.8□□□□□ -1.32
HLA-DOA-201ENST00000229829 JMJD1CQ15652 2540 aa6.8□□□□□ -1.32
HLA-DOA-201ENST00000229829 USP24Q9UPU5 2620 aa6.8□□□□□ -1.32
HLA-DOA-201ENST00000229829 PRIMA1Q86XR5 153 aa6.8□□□□□ -1.32
HLA-DOA-201ENST00000229829 LITAFQ99732 161 aa6.8□□□□□ -1.32
HLA-DOA-201ENST00000229829 ZNF702PQ9H963 129 aa6.8□□□□□ -1.32
HLA-DOA-201ENST00000229829 LINC01356Q8N9X3 169 aa6.79□□□□□ -1.32
HLA-DOA-201ENST00000229829 IGHV1-58A0A0C4DH39 117 aa6.79□□□□□ -1.32
HLA-DOA-201ENST00000229829 USP17L23D6RBM5 183 aa6.79□□□□□ -1.32
HLA-DOA-201ENST00000229829 RPL18AQ02543 176 aaKnown RBP6.79□□□□□ -1.32
HLA-DOA-201ENST00000229829 PIK3CD-AS1Q5SR53 167 aa6.79□□□□□ -1.32
HLA-DOA-201ENST00000229829 OXTP01178 125 aa6.78□□□□□ -1.32
HLA-DOA-201ENST00000229829 MRPS36P82909 103 aaKnown RBP6.78□□□□□ -1.32
HLA-DOA-201ENST00000229829 TMEM243Q9BU79 118 aa6.78□□□□□ -1.32
HLA-DOA-201ENST00000229829 CDKN2A-AS1Q9UH64 79 aa6.78□□□□□ -1.32
HLA-DOA-201ENST00000229829 CMYA5Q8N3K9 4069 aa6.78□□□□□ -1.32
HLA-DOA-201ENST00000229829 A0A096LNT2 108 aa6.78□□□□□ -1.32
HLA-DOA-201ENST00000229829 J3QKU1 62 aa6.78□□□□□ -1.32
HLA-DOA-201ENST00000229829 SLPIP03973 132 aa6.78□□□□□ -1.32
HLA-DOA-201ENST00000229829 INAFM2P0DMQ5 153 aa6.78□□□□□ -1.32
HLA-DOA-201ENST00000229829 HILS1P60008 231 aa6.78□□□□□ -1.32
HLA-DOA-201ENST00000229829 UBE2E2Q96LR5 201 aa6.78□□□□□ -1.32
HLA-DOA-201ENST00000229829 COX7A2LO14548 114 aa6.78□□□□□ -1.32
HLA-DOA-201ENST00000229829 RPL35AP18077 110 aaKnown RBP6.78□□□□□ -1.32
HLA-DOA-201ENST00000229829 CHCHD7Q9BUK0 85 aa6.78□□□□□ -1.32
HLA-DOA-201ENST00000229829 PYGO1Q9Y3Y4 419 aa6.78□□□□□ -1.32
HLA-DOA-201ENST00000229829 FN1P02751 2386 aaKnown RBP6.77□□□□□ -1.33
HLA-DOA-201ENST00000229829 TMEM89A2RUT3 159 aa6.77□□□□□ -1.33
HLA-DOA-201ENST00000229829 LINC00467Q9BRT7 94 aa6.77□□□□□ -1.33
HLA-DOA-201ENST00000229829 CRYGAP11844 174 aa6.77□□□□□ -1.33
HLA-DOA-201ENST00000229829 TMEM258P61165 79 aa6.77□□□□□ -1.33
HLA-DOA-201ENST00000229829 SERP2Q8N6R1 65 aa6.77□□□□□ -1.33
HLA-DOA-201ENST00000229829 NCR3O14931 201 aa6.77□□□□□ -1.33
HLA-DOA-201ENST00000229829 PFN2P35080 140 aa6.77□□□□□ -1.33
HLA-DOA-201ENST00000229829 UBE2D4Q9Y2X8 147 aa6.77□□□□□ -1.33
HLA-DOA-201ENST00000229829 GHRHP01286 108 aa6.76□□□□□ -1.33
HLA-DOA-201ENST00000229829 SEC61GP60059 68 aa6.76□□□□□ -1.33
HLA-DOA-201ENST00000229829 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.76□□□□□ -1.33
HLA-DOA-201ENST00000229829 VSIG2Q96IQ7 327 aa6.76□□□□□ -1.33
HLA-DOA-201ENST00000229829 FAM218AQ96MZ4 157 aa6.76□□□□□ -1.33
HLA-DOA-201ENST00000229829 CCDC168Q8NDH2 2452 aa6.76□□□□□ -1.33
HLA-DOA-201ENST00000229829 SETXQ7Z333 2677 aaKnown RBP6.76□□□□□ -1.33
HLA-DOA-201ENST00000229829 LINC00308Q8TCZ7 52 aa6.76□□□□□ -1.33
HLA-DOA-201ENST00000229829 Q6YL49 198 aa6.75□□□□□ -1.33
HLA-DOA-201ENST00000229829 C2orf48Q96LS8 159 aa6.75□□□□□ -1.33
HLA-DOA-201ENST00000229829 C11orf68Q9H3H3 251 aaKnown RBP6.75□□□□□ -1.33
HLA-DOA-201ENST00000229829 CR1P17927 2039 aa6.75□□□□□ -1.33
HLA-DOA-201ENST00000229829 CRPP02741 224 aa6.75□□□□□ -1.33
HLA-DOA-201ENST00000229829 BRK1Q8WUW1 75 aa6.75□□□□□ -1.33
HLA-DOA-201ENST00000229829 LINC00846Q9NV44 126 aa6.75□□□□□ -1.33
HLA-DOA-201ENST00000229829 J3QLI3 93 aa6.74□□□□□ -1.33
HLA-DOA-201ENST00000229829 C11orf72Q8NBR9 251 aa6.74□□□□□ -1.33
HLA-DOA-201ENST00000229829 MAP6D1Q9H9H5 199 aa6.74□□□□□ -1.33
HLA-DOA-201ENST00000229829 APCP25054 2843 aa6.74□□□□□ -1.33
HLA-DOA-201ENST00000229829 ANK3Q12955 4377 aaKnown RBP6.74□□□□□ -1.33
HLA-DOA-201ENST00000229829 IGHV3OR16-12A0A075B7B8 117 aa6.74□□□□□ -1.33
HLA-DOA-201ENST00000229829 LECT2O14960 151 aa6.74□□□□□ -1.33
HLA-DOA-201ENST00000229829 DSCR9P59020 149 aa6.74□□□□□ -1.33
HLA-DOA-201ENST00000229829 KRTAP10-9P60411 292 aa6.74□□□□□ -1.33
HLA-DOA-201ENST00000229829 COX6A2Q02221 97 aa6.74□□□□□ -1.33
HLA-DOA-201ENST00000229829 ZNF415Q09FC8 603 aa6.73□□□□□ -1.33
HLA-DOA-201ENST00000229829 C9orf129Q5T035 196 aaKnown RBP6.73□□□□□ -1.33
HLA-DOA-201ENST00000229829 HIST2H2BCQ6DN03 193 aa6.73□□□□□ -1.33
HLA-DOA-201ENST00000229829 LINC00336Q6ZUF6 198 aa6.73□□□□□ -1.33
HLA-DOA-201ENST00000229829 XCL2Q9UBD3 114 aa6.73□□□□□ -1.33
HLA-DOA-201ENST00000229829 FHL2Q14192 279 aa6.73□□□□□ -1.33
HLA-DOA-201ENST00000229829 MRAPQ8TCY5 172 aa6.73□□□□□ -1.33
HLA-DOA-201ENST00000229829 SPANXDQ9BXN6 97 aa6.73□□□□□ -1.33
HLA-DOA-201ENST00000229829 SPANXCQ9NY87 97 aa6.73□□□□□ -1.33
HLA-DOA-201ENST00000229829 SNURFQ9Y675 71 aa6.73□□□□□ -1.33
HLA-DOA-201ENST00000229829 A8MTW9 85 aa6.73□□□□□ -1.33
HLA-DOA-201ENST00000229829 LINC00158P58513 81 aa6.73□□□□□ -1.33
HLA-DOA-201ENST00000229829 KRTAP1-3Q8IUG1 177 aa6.73□□□□□ -1.33
HLA-DOA-201ENST00000229829 ITPR3Q14573 2671 aa6.72□□□□□ -1.33
HLA-DOA-201ENST00000229829 FSHBP01225 129 aa6.72□□□□□ -1.33
HLA-DOA-201ENST00000229829 IGHV3-53P01767 116 aa6.72□□□□□ -1.33
HLA-DOA-201ENST00000229829 C11orf44Q8N8P7 122 aa6.72□□□□□ -1.33
HLA-DOA-201ENST00000229829 IGHV4-31P0DP07 118 aa6.72□□□□□ -1.33
HLA-DOA-201ENST00000229829 RPS28P62857 69 aaKnown RBP6.72□□□□□ -1.33
HLA-DOA-201ENST00000229829 C5orf38Q86SI9 138 aa6.72□□□□□ -1.33
HLA-DOA-201ENST00000229829 FAM236DA0A1B0GTK5 79 aa6.71□□□□□ -1.33
HLA-DOA-201ENST00000229829 FAM236CP0DP71 79 aa6.71□□□□□ -1.33
HLA-DOA-201ENST00000229829 CXCL5P42830 114 aa6.71□□□□□ -1.33
HLA-DOA-201ENST00000229829 RBM3P98179 157 aaKnown RBP6.71□□□□□ -1.33
HLA-DOA-201ENST00000229829 DEFB121Q5J5C9 76 aa6.71□□□□□ -1.33
HLA-DOA-201ENST00000229829 ENHOQ6UWT2 76 aa6.71□□□□□ -1.33
HLA-DOA-201ENST00000229829 FAM19A1Q7Z5A9 133 aa6.71□□□□□ -1.33
HLA-DOA-201ENST00000229829 PAX4O43316 350 aa6.71□□□□□ -1.34
HLA-DOA-201ENST00000229829 RPL36AP83881 106 aaKnown RBP6.71□□□□□ -1.34
HLA-DOA-201ENST00000229829 RPL36ALQ969Q0 106 aaKnown RBP6.71□□□□□ -1.34
HLA-DOA-201ENST00000229829 DEFB114Q30KQ6 69 aa6.71□□□□□ -1.34
HLA-DOA-201ENST00000229829 SOSTDC1Q6X4U4 206 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms