RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 COL4A6Q14031 1691 aa2.55□□□□□ -2
NEB-201ENST00000172853 NEXN-AS1Q8NBZ9 246 aa2.55□□□□□ -2
NEB-201ENST00000172853 K7EQG2 157 aa2.55□□□□□ -2
NEB-201ENST00000172853 IGLV3-1P01715 115 aa2.55□□□□□ -2
NEB-201ENST00000172853 EGFEM1PQ0D2K5 195 aa2.55□□□□□ -2
NEB-201ENST00000172853 LINC00208Q96KT6 92 aa2.55□□□□□ -2
NEB-201ENST00000172853 Q8N7P7 452 aa2.55□□□□□ -2
NEB-201ENST00000172853 COL6A6A6NMZ7 2263 aa2.55□□□□□ -2
NEB-201ENST00000172853 H0Y9P7 68 aa2.55□□□□□ -2
NEB-201ENST00000172853 EXPH5Q8NEV8 1989 aa2.54□□□□□ -2
NEB-201ENST00000172853 POM121L12Q8N7R1 296 aa2.54□□□□□ -2
NEB-201ENST00000172853 PCOTHQ58A44 107 aa2.54□□□□□ -2
NEB-201ENST00000172853 CEMP1Q6PRD7 247 aaPredicted RBP2.54□□□□□ -2
NEB-201ENST00000172853 VPREB1P12018 145 aa2.54□□□□□ -2
NEB-201ENST00000172853 LINC01006Q8NI28 216 aa2.54□□□□□ -2
NEB-201ENST00000172853 DSCAMO60469 2012 aa2.54□□□□□ -2
NEB-201ENST00000172853 RPL37AP61513 92 aaKnown RBP2.54□□□□□ -2
NEB-201ENST00000172853 SPAG11AQ6PDA7 123 aa2.54□□□□□ -2
NEB-201ENST00000172853 K7EN84 100 aa2.54□□□□□ -2
NEB-201ENST00000172853 Q6ZRP5 223 aa2.54□□□□□ -2
NEB-201ENST00000172853 TP53AIP1Q9HCN2 124 aa2.54□□□□□ -2
NEB-201ENST00000172853 HIGD1BQ9P298 99 aa2.54□□□□□ -2
NEB-201ENST00000172853 HIVEP3Q5T1R4 2406 aa2.54□□□□□ -2
NEB-201ENST00000172853 LINC00959A0A1B0GUT2 108 aa2.54□□□□□ -2
NEB-201ENST00000172853 LINC00467Q9BRT7 94 aa2.54□□□□□ -2
NEB-201ENST00000172853 UQCRQO14949 82 aa2.54□□□□□ -2
NEB-201ENST00000172853 Q8IZM0 81 aa2.54□□□□□ -2
NEB-201ENST00000172853 RAI1Q7Z5J4 1906 aaPredicted RBP2.54□□□□□ -2
NEB-201ENST00000172853 PCNX3Q9H6A9 2034 aa2.54□□□□□ -2
NEB-201ENST00000172853 CADP27708 2225 aa2.53□□□□□ -2
NEB-201ENST00000172853 ADAMTS20P59510 1910 aa2.53□□□□□ -2
NEB-201ENST00000172853 MED13Q9UHV7 2174 aa2.53□□□□□ -2
NEB-201ENST00000172853 C1orf195Q5TG92 126 aa2.53□□□□□ -2
NEB-201ENST00000172853 CRIPTQ9P021 101 aa2.53□□□□□ -2
NEB-201ENST00000172853 HCG22E2RYF7 251 aa2.53□□□□□ -2
NEB-201ENST00000172853 EBI3Q14213 229 aa2.53□□□□□ -2
NEB-201ENST00000172853 LMO4P61968 165 aa2.53□□□□□ -2
NEB-201ENST00000172853 C19orf84I3L1E1 186 aa2.53□□□□□ -2
NEB-201ENST00000172853 M0R2T5 61 aa2.53□□□□□ -2
NEB-201ENST00000172853 LINC00313P59037 77 aa2.53□□□□□ -2
NEB-201ENST00000172853 LINC01547P58512 204 aaPredicted RBP2.53□□□□□ -2
NEB-201ENST00000172853 CHD8Q9HCK8 2581 aa2.53□□□□□ -2
NEB-201ENST00000172853 CRIPAKQ8N1N5 446 aa2.53□□□□□ -2.01
NEB-201ENST00000172853 SPG11Q96JI7 2443 aa2.52□□□□□ -2.01
NEB-201ENST00000172853 TRBV6-5A0A0K0K1A5 114 aa2.52□□□□□ -2.01
NEB-201ENST00000172853 DSCAML1Q8TD84 2053 aa2.52□□□□□ -2.01
NEB-201ENST00000172853 UNQ9165/PRO28630Q6UXU0 137 aa2.52□□□□□ -2.01
NEB-201ENST00000172853 SNURFQ9Y675 71 aa2.52□□□□□ -2.01
NEB-201ENST00000172853 Q6ZTC4 211 aa2.52□□□□□ -2.01
NEB-201ENST00000172853 OTOGLQ3ZCN5 2332 aa2.52□□□□□ -2.01
NEB-201ENST00000172853 LINC00308Q8TCZ7 52 aa2.52□□□□□ -2.01
NEB-201ENST00000172853 COX6A2Q02221 97 aa2.52□□□□□ -2.01
NEB-201ENST00000172853 TTTY13Q9BZ97 58 aa2.52□□□□□ -2.01
NEB-201ENST00000172853 PROK1P58294 105 aa2.52□□□□□ -2.01
NEB-201ENST00000172853 C16orf95Q9H693 158 aa2.52□□□□□ -2.01
NEB-201ENST00000172853 C1orf147Q96MC9 270 aaPredicted RBP2.52□□□□□ -2.01
NEB-201ENST00000172853 ANKRD11Q6UB99 2663 aaPredicted RBP2.52□□□□□ -2.01
NEB-201ENST00000172853 CYSRT1A8MQ03 144 aa2.52□□□□□ -2.01
NEB-201ENST00000172853 SMCR5Q8TEV8 140 aa2.52□□□□□ -2.01
NEB-201ENST00000172853 ZNF407Q9C0G0 2248 aa2.52□□□□□ -2.01
NEB-201ENST00000172853 TP53TG3Q9ULZ0 132 aa2.52□□□□□ -2.01
NEB-201ENST00000172853 TLN1Q9Y490 2541 aaKnown RBP2.52□□□□□ -2.01
NEB-201ENST00000172853 MYO18BQ8IUG5 2567 aa2.52□□□□□ -2.01
NEB-201ENST00000172853 PMAIP1Q13794 54 aa2.52□□□□□ -2.01
NEB-201ENST00000172853 LINC00336Q6ZUF6 198 aa2.51□□□□□ -2.01
NEB-201ENST00000172853 C22orf34Q6ZV56 151 aa2.51□□□□□ -2.01
NEB-201ENST00000172853 PTPRQQ9UMZ3 2332 aa2.51□□□□□ -2.01
NEB-201ENST00000172853 TRBV7-7A0A0K0K1E9 115 aa2.51□□□□□ -2.01
NEB-201ENST00000172853 CACNA1AO00555 2505 aa2.51□□□□□ -2.01
NEB-201ENST00000172853 PROK2Q9HC23 129 aa2.51□□□□□ -2.01
NEB-201ENST00000172853 NOTCH2Q04721 2471 aa2.51□□□□□ -2.01
NEB-201ENST00000172853 LRP4O75096 1905 aa2.51□□□□□ -2.01
NEB-201ENST00000172853 FSTL3O95633 263 aa2.51□□□□□ -2.01
NEB-201ENST00000172853 LINC00694P0DN24 101 aa2.51□□□□□ -2.01
NEB-201ENST00000172853 LINC01554Q52M75 96 aa2.51□□□□□ -2.01
NEB-201ENST00000172853 BRWD1-AS2P59051 145 aa2.51□□□□□ -2.01
NEB-201ENST00000172853 SMIM26A0A096LP01 95 aa2.51□□□□□ -2.01
NEB-201ENST00000172853 BRI3O95415 125 aa2.51□□□□□ -2.01
NEB-201ENST00000172853 TRAV7A0A075B6U4 112 aa2.5□□□□□ -2.01
NEB-201ENST00000172853 Q96NJ1 140 aa2.5□□□□□ -2.01
NEB-201ENST00000172853 KIF25-AS1Q9Y6Z4 181 aa2.5□□□□□ -2.01
NEB-201ENST00000172853 SPATA3Q8NHX4 192 aa2.5□□□□□ -2.01
NEB-201ENST00000172853 U3KQA8 63 aa2.5□□□□□ -2.01
NEB-201ENST00000172853 IGLV1-47P01700 117 aa2.5□□□□□ -2.01
NEB-201ENST00000172853 EPM2AB3EWF7 344 aa2.5□□□□□ -2.01
NEB-201ENST00000172853 CPAMD8Q8IZJ3 1885 aa2.5□□□□□ -2.01
NEB-201ENST00000172853 IGF2RP11717 2491 aa2.5□□□□□ -2.01
NEB-201ENST00000172853 ZNF503-AS2A6NEH8 195 aa2.5□□□□□ -2.01
NEB-201ENST00000172853 LINC00483Q53H64 154 aa2.5□□□□□ -2.01
NEB-201ENST00000172853 FREM1Q5H8C1 2179 aa2.5□□□□□ -2.01
NEB-201ENST00000172853 Q8NBF4 154 aa2.5□□□□□ -2.01
NEB-201ENST00000172853 ACACBO00763 2458 aa2.5□□□□□ -2.01
NEB-201ENST00000172853 CDKN2A-AS1Q9UH64 79 aa2.5□□□□□ -2.01
NEB-201ENST00000172853 MOBPQ13875 183 aa2.5□□□□□ -2.01
NEB-201ENST00000172853 RSPO1Q2MKA7 263 aaPredicted RBP2.5□□□□□ -2.01
NEB-201ENST00000172853 CEP295Q9C0D2 2601 aa2.5□□□□□ -2.01
NEB-201ENST00000172853 HCFC1P51610 2035 aa2.5□□□□□ -2.01
NEB-201ENST00000172853 IGLV4-3A0A075B6K6 122 aa2.5□□□□□ -2.01
NEB-201ENST00000172853 FHL3Q13643 280 aa2.5□□□□□ -2.01
NEB-201ENST00000172853 APLNQ9ULZ1 77 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms